RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

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Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 SAMD13Q5VXD3 122 aa7.34□□□□□ -1.23
CUX1-206ENST00000437600 RBPMS2Q6ZRY4 209 aaKnown RBP7.34□□□□□ -1.23
CUX1-206ENST00000437600 TTC9CQ8N5M4 171 aa7.34□□□□□ -1.23
CUX1-206ENST00000437600 MRPS16Q9Y3D3 137 aaKnown RBP7.34□□□□□ -1.23
CUX1-206ENST00000437600 TRAV30A0A087WSZ9 112 aa7.34□□□□□ -1.23
CUX1-206ENST00000437600 Q8N6K4 173 aa7.34□□□□□ -1.23
CUX1-206ENST00000437600 MSRB1Q9NZV6 116 aa7.34□□□□□ -1.23
CUX1-206ENST00000437600 K7ERU9 68 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 Q6ZS46 218 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 WFDC11Q8NEX6 87 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 AAMDCQ9H7C9 122 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 TMEM14CQ9P0S9 112 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 FAM181BA6NEQ2 426 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 SMKR1H3BMG3 65 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 DEFB113Q30KQ7 82 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 Q96MF0 132 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 MEGF9Q9H1U4 602 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 IGHV3-11P01762 117 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 IGHG4P01861 327 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 HERV-K104P63124 156 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 PAX8Q06710 450 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 LYZL1Q6UWQ5 148 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 THYN1Q9P016 225 aa7.33□□□□□ -1.24
CUX1-206ENST00000437600 WIPF2Q8TF74 440 aaPredicted RBP7.32□□□□□ -1.24
CUX1-206ENST00000437600 IGHV1-69DA0A0B4J2H0 117 aa7.32□□□□□ -1.24
CUX1-206ENST00000437600 A0A1B0GW15 77 aa7.32□□□□□ -1.24
CUX1-206ENST00000437600 SMAD7O15105 426 aaKnown RBP7.32□□□□□ -1.24
CUX1-206ENST00000437600 GAS8-AS1O95177 125 aa7.32□□□□□ -1.24
CUX1-206ENST00000437600 TRBV12-3P01733 135 aa7.32□□□□□ -1.24
CUX1-206ENST00000437600 IGHV1-69P01742 117 aa7.32□□□□□ -1.24
CUX1-206ENST00000437600 MSMBP08118 114 aa7.32□□□□□ -1.24
CUX1-206ENST00000437600 IGLL1P15814 213 aa7.32□□□□□ -1.24
CUX1-206ENST00000437600 LOXL1Q08397 574 aaPredicted RBP7.32□□□□□ -1.24
CUX1-206ENST00000437600 WFDC3Q8IUB2 231 aa7.32□□□□□ -1.24
CUX1-206ENST00000437600 AMN1Q8IY45 258 aa7.32□□□□□ -1.24
CUX1-206ENST00000437600 A0A1B0GUT8 65 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 A4D1N5 150 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 ORM1P02763 201 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 CT45A10P0DMU9 189 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 BLCAPP62952 87 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 MPV17L2Q567V2 206 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 DPF1Q92782 380 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 RABAC1Q9UI14 185 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.31□□□□□ -1.24
CUX1-206ENST00000437600 IGHV1-24A0A0C4DH33 117 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 hDV102S1A0JD36 115 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 C2orf70A6NJV1 201 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 H3BUX3 64 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 K7EQM0 130 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 SNAI2O43623 268 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 CSN1S1P47710 185 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 EBI3Q14213 229 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
CUX1-206ENST00000437600 ANK3Q12955 4377 aaKnown RBP7.31□□□□□ -1.24
CUX1-206ENST00000437600 TRAV9-2A0A087WT02 112 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 SH2D1AO60880 128 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 RAB9AP51151 201 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 COX19Q49B96 90 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 AMMECR1LQ6DCA0 310 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 KRTAP1-3Q8IUG1 177 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 PIFOQ8TCI5 191 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 WNK1Q9H4A3 2382 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 MAST4O15021 2626 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 OOSP1A8MZH6 123 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 NPIPB6E9PJ23 425 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 NCR2O95944 276 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 TGFAP01135 160 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 SRD5A1P18405 259 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 PRR25Q96S07 402 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 JMJD1CQ15652 2540 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 TMEM189A5PLL7 270 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 IGF1P05019 195 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 IFI27P40305 119 aaPredicted RBP7.3□□□□□ -1.24
CUX1-206ENST00000437600 KLK15Q9H2R5 256 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 ZNF492Q9P255 531 aa7.3□□□□□ -1.24
CUX1-206ENST00000437600 D6R8Y8 96 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 TAX1BP3O14907 124 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 LEPROTL1O95214 131 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 RPL7P18124 248 aaKnown RBP7.29□□□□□ -1.24
CUX1-206ENST00000437600 RPL11P62913 178 aaKnown RBP7.29□□□□□ -1.24
CUX1-206ENST00000437600 TWIST1Q15672 202 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 BOD1L2Q8IYS8 172 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 ZNF502Q8TBZ5 544 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 SRSF8Q9BRL6 282 aaKnown RBP7.29□□□□□ -1.24
CUX1-206ENST00000437600 BUB3O43684 328 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 NUDT3O95989 172 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 RASL11AQ6T310 242 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 IL17RELQ6ZVW7 336 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 ATP5L2Q7Z4Y8 100 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 ZNF575Q86XF7 245 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 C5orf56Q8N8D9 126 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 PRSS3P2Q8NHM4 247 aa7.29□□□□□ -1.24
CUX1-206ENST00000437600 NSD1Q96L73 2696 aaPredicted RBP7.29□□□□□ -1.24
CUX1-206ENST00000437600 A0A096LNT2 108 aa7.28□□□□□ -1.24
CUX1-206ENST00000437600 CLPSL1A2RUU4 121 aa7.28□□□□□ -1.24
CUX1-206ENST00000437600 KLF5Q13887 457 aaPredicted RBP7.28□□□□□ -1.24
CUX1-206ENST00000437600 UNQ9165/PRO28630Q6UXU0 137 aa7.28□□□□□ -1.24
CUX1-206ENST00000437600 DEFB104AQ8WTQ1 72 aa7.28□□□□□ -1.24
CUX1-206ENST00000437600 F8P00451 2351 aa7.28□□□□□ -1.24
CUX1-206ENST00000437600 HIVEP2P31629 2446 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms