RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IGLC6P0CF74 106 aa19.5■□□□□ 0.71
CPNE1-216ENST00000437340 AMTP48728 403 aa19.5■□□□□ 0.71
CPNE1-216ENST00000437340 FER1L6-AS1Q8NA97 138 aa19.5■□□□□ 0.71
CPNE1-216ENST00000437340 UBE2E2Q96LR5 201 aa19.5■□□□□ 0.71
CPNE1-216ENST00000437340 ORM1P02763 201 aa19.49■□□□□ 0.71
CPNE1-216ENST00000437340 ZNF575Q86XF7 245 aa19.49■□□□□ 0.71
CPNE1-216ENST00000437340 YAE1D1Q9NRH1 226 aa19.49■□□□□ 0.71
CPNE1-216ENST00000437340 DMRTA1Q5VZB9 504 aa19.49■□□□□ 0.71
CPNE1-216ENST00000437340 RPL11P62913 178 aaKnown RBP19.48■□□□□ 0.71
CPNE1-216ENST00000437340 SONP18583 2426 aaKnown RBP19.48■□□□□ 0.71
CPNE1-216ENST00000437340 SCGB1D1O95968 90 aa19.47■□□□□ 0.71
CPNE1-216ENST00000437340 REC114Q7Z4M0 266 aa19.47■□□□□ 0.71
CPNE1-216ENST00000437340 OR10J6PQ8NGY7 276 aa19.47■□□□□ 0.71
CPNE1-216ENST00000437340 NAGKQ9UJ70 344 aa19.47■□□□□ 0.71
CPNE1-216ENST00000437340 ANK3Q12955 4377 aaKnown RBP19.47■□□□□ 0.71
CPNE1-216ENST00000437340 PMCHP20382 165 aa19.47■□□□□ 0.71
CPNE1-216ENST00000437340 PKIAP61925 76 aa19.47■□□□□ 0.71
CPNE1-216ENST00000437340 SMR3AQ99954 134 aa19.47■□□□□ 0.71
CPNE1-216ENST00000437340 CNFNQ9BYD5 112 aa19.47■□□□□ 0.71
CPNE1-216ENST00000437340 LGALS9O00182 355 aa19.45■□□□□ 0.7
CPNE1-216ENST00000437340 HSBP1O75506 76 aa19.45■□□□□ 0.7
CPNE1-216ENST00000437340 PRR31Q5SQ13 230 aa19.45■□□□□ 0.7
CPNE1-216ENST00000437340 FLNBO75369 2602 aaKnown RBP19.45■□□□□ 0.7
CPNE1-216ENST00000437340 BAHCC1Q9P281 2608 aa19.45■□□□□ 0.7
CPNE1-216ENST00000437340 TMEM213A2RRL7 107 aa19.44■□□□□ 0.7
CPNE1-216ENST00000437340 LINC00587B1AMM8 73 aa19.44■□□□□ 0.7
CPNE1-216ENST00000437340 NIT1Q86X76 327 aa19.44■□□□□ 0.7
CPNE1-216ENST00000437340 CHCHD1Q96BP2 118 aaKnown RBP19.44■□□□□ 0.7
CPNE1-216ENST00000437340 TRBV7-9A0A0J9YWB2 115 aa19.43■□□□□ 0.7
CPNE1-216ENST00000437340 TSTD3H0UI37 97 aa19.43■□□□□ 0.7
CPNE1-216ENST00000437340 ID1P41134 155 aa19.43■□□□□ 0.7
CPNE1-216ENST00000437340 IGKV3D-20A0A0C4DH25 116 aa19.42■□□□□ 0.7
CPNE1-216ENST00000437340 FAM104BQ5XKR9 115 aa19.42■□□□□ 0.7
CPNE1-216ENST00000437340 RNASEKQ6P5S7 137 aaKnown RBP19.42■□□□□ 0.7
CPNE1-216ENST00000437340 FAM19A2Q8N3H0 131 aa19.42■□□□□ 0.7
CPNE1-216ENST00000437340 URB1-AS1Q96HZ7 61 aa19.42■□□□□ 0.7
CPNE1-216ENST00000437340 NTF3P20783 257 aa19.41■□□□□ 0.7
CPNE1-216ENST00000437340 OR8A1Q8NGG7 326 aa19.41■□□□□ 0.7
CPNE1-216ENST00000437340 DCANP1Q8TF63 244 aa19.41■□□□□ 0.7
CPNE1-216ENST00000437340 DUX5Q96PT3 197 aa19.41■□□□□ 0.7
CPNE1-216ENST00000437340 IGHV4OR15-8A0A075B7B6 117 aa19.4■□□□□ 0.7
CPNE1-216ENST00000437340 A0A087WW49 117 aa19.4■□□□□ 0.7
CPNE1-216ENST00000437340 ZNF705DP0CH99 300 aaPredicted RBP19.4■□□□□ 0.7
CPNE1-216ENST00000437340 ZNF705BP0CI00 300 aaPredicted RBP19.4■□□□□ 0.7
CPNE1-216ENST00000437340 CD33P20138 364 aa19.4■□□□□ 0.7
CPNE1-216ENST00000437340 EDN2P20800 178 aa19.4■□□□□ 0.7
CPNE1-216ENST00000437340 FAM19A4Q96LR4 140 aa19.4■□□□□ 0.7
CPNE1-216ENST00000437340 C11orf21Q9P2W6 132 aa19.4■□□□□ 0.7
CPNE1-216ENST00000437340 IGKV3-7A0A075B6H7 116 aa19.39■□□□□ 0.7
CPNE1-216ENST00000437340 FAM181BA6NEQ2 426 aa19.39■□□□□ 0.7
CPNE1-216ENST00000437340 TWIST1Q15672 202 aa19.39■□□□□ 0.7
CPNE1-216ENST00000437340 ZNF664Q8N3J9 261 aa19.39■□□□□ 0.7
CPNE1-216ENST00000437340 U3KQK5 164 aa19.39■□□□□ 0.7
CPNE1-216ENST00000437340 LY6G6DO95868 133 aa19.39■□□□□ 0.69
CPNE1-216ENST00000437340 ZFAND2AQ8N6M9 145 aa19.39■□□□□ 0.69
CPNE1-216ENST00000437340 KLHDC1Q8N7A1 406 aa19.39■□□□□ 0.69
CPNE1-216ENST00000437340 TMEM191AQ9H0A3 160 aa19.39■□□□□ 0.69
CPNE1-216ENST00000437340 M0R2Z0 102 aa19.38■□□□□ 0.69
CPNE1-216ENST00000437340 HOXD3P31249 432 aaPredicted RBP19.38■□□□□ 0.69
CPNE1-216ENST00000437340 LINC00614P0C842 121 aa19.37■□□□□ 0.69
CPNE1-216ENST00000437340 SYNJ2BPP57105 145 aa19.37■□□□□ 0.69
CPNE1-216ENST00000437340 APRG1Q8IVJ8 170 aa19.37■□□□□ 0.69
CPNE1-216ENST00000437340 KRTDAPP60985 99 aa19.37■□□□□ 0.69
CPNE1-216ENST00000437340 RNF114Q9Y508 228 aa19.37■□□□□ 0.69
CPNE1-216ENST00000437340 TRAV21A0A0B4J279 112 aa19.36■□□□□ 0.69
CPNE1-216ENST00000437340 RAB4AP20338 218 aa19.36■□□□□ 0.69
CPNE1-216ENST00000437340 PRR9Q5T870 116 aa19.36■□□□□ 0.69
CPNE1-216ENST00000437340 TEX43Q6ZNM6 134 aa19.36■□□□□ 0.69
CPNE1-216ENST00000437340 AMN1Q8IY45 258 aa19.36■□□□□ 0.69
CPNE1-216ENST00000437340 TMEM160Q9NX00 188 aa19.36■□□□□ 0.69
CPNE1-216ENST00000437340 SRD5A1P18405 259 aa19.35■□□□□ 0.69
CPNE1-216ENST00000437340 ORMDL3Q8N138 153 aa19.35■□□□□ 0.69
CPNE1-216ENST00000437340 MS4A6AQ9H2W1 248 aa19.35■□□□□ 0.69
CPNE1-216ENST00000437340 PRO1933Q9H354 126 aa19.35■□□□□ 0.69
CPNE1-216ENST00000437340 MUC21A0A0G2JKD1 596 aa19.34■□□□□ 0.69
CPNE1-216ENST00000437340 MUC21A0A140T8X8 626 aa19.34■□□□□ 0.69
CPNE1-216ENST00000437340 OR5AL1P0C617 328 aa19.34■□□□□ 0.69
CPNE1-216ENST00000437340 SSTP61278 116 aa19.34■□□□□ 0.69
CPNE1-216ENST00000437340 MUC21Q5SSG8 566 aa19.34■□□□□ 0.69
CPNE1-216ENST00000437340 C3orf79P0CE67 100 aa19.34■□□□□ 0.69
CPNE1-216ENST00000437340 MRPL51Q4U2R6 128 aaKnown RBP19.34■□□□□ 0.69
CPNE1-216ENST00000437340 DNAJC9-AS1A6NH13 148 aa19.33■□□□□ 0.68
CPNE1-216ENST00000437340 D6R8Y8 96 aa19.33■□□□□ 0.68
CPNE1-216ENST00000437340 F6UB75 175 aa19.33■□□□□ 0.68
CPNE1-216ENST00000437340 M0QZ24 198 aa19.33■□□□□ 0.68
CPNE1-216ENST00000437340 Q8N976 141 aa19.33■□□□□ 0.68
CPNE1-216ENST00000437340 C2orf70A6NJV1 201 aa19.32■□□□□ 0.68
CPNE1-216ENST00000437340 SNAI2O43623 268 aa19.32■□□□□ 0.68
CPNE1-216ENST00000437340 DEFB1P60022 68 aa19.32■□□□□ 0.68
CPNE1-216ENST00000437340 C4orf3Q8WVX3 66 aa19.32■□□□□ 0.68
CPNE1-216ENST00000437340 DDTP30046 118 aa19.32■□□□□ 0.68
CPNE1-216ENST00000437340 Q6ZSV7 163 aa19.32■□□□□ 0.68
CPNE1-216ENST00000437340 PRELID3AQ96N28 172 aa19.32■□□□□ 0.68
CPNE1-216ENST00000437340 K7EQG2 157 aa19.31■□□□□ 0.68
CPNE1-216ENST00000437340 SNRPD3P62318 126 aaKnown RBP19.31■□□□□ 0.68
CPNE1-216ENST00000437340 WFDC3Q8IUB2 231 aa19.31■□□□□ 0.68
CPNE1-216ENST00000437340 MSRB1Q9NZV6 116 aa19.31■□□□□ 0.68
CPNE1-216ENST00000437340 IGHV4-4A0A075B6R2 117 aa19.3■□□□□ 0.68
CPNE1-216ENST00000437340 IGHV1-24A0A0C4DH33 117 aa19.3■□□□□ 0.68
CPNE1-216ENST00000437340 LINC01619G3V211 115 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms