RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 J3QR89 54 aa9.68□□□□□ -0.86
TMEM116-202ENST00000437003 NRGNQ92686 78 aa9.68□□□□□ -0.86
TMEM116-202ENST00000437003 ANKHD1Q8IWZ3 2542 aaKnown RBP9.67□□□□□ -0.86
TMEM116-202ENST00000437003 IGLL5B9A064 214 aa9.67□□□□□ -0.86
TMEM116-202ENST00000437003 LY6HO94772 140 aa9.67□□□□□ -0.86
TMEM116-202ENST00000437003 IGKV1-17P01599 117 aa9.67□□□□□ -0.86
TMEM116-202ENST00000437003 CEND1Q8N111 149 aa9.67□□□□□ -0.86
TMEM116-202ENST00000437003 Q8TAT8 98 aa9.67□□□□□ -0.86
TMEM116-202ENST00000437003 LINC01560Q8TB33 94 aa9.67□□□□□ -0.86
TMEM116-202ENST00000437003 IGKV2-40A0A087WW87 121 aaPredicted RBP9.67□□□□□ -0.86
TMEM116-202ENST00000437003 TEX22C9J3V5 150 aa9.67□□□□□ -0.86
TMEM116-202ENST00000437003 BUB1B-PAK6H3BSN5 160 aa9.67□□□□□ -0.86
TMEM116-202ENST00000437003 IGKV2D-40P01614 121 aaPredicted RBP9.67□□□□□ -0.86
TMEM116-202ENST00000437003 IGLV1-47P01700 117 aa9.67□□□□□ -0.86
TMEM116-202ENST00000437003 PPIFP30405 207 aaKnown RBP9.67□□□□□ -0.86
TMEM116-202ENST00000437003 FOXI2Q6ZQN5 318 aa9.67□□□□□ -0.86
TMEM116-202ENST00000437003 IGKCP01834 107 aa9.66□□□□□ -0.86
TMEM116-202ENST00000437003 IL4P05112 153 aa9.66□□□□□ -0.86
TMEM116-202ENST00000437003 GATA1P15976 413 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-202ENST00000437003 VKORC1Q9BQB6 163 aa9.66□□□□□ -0.86
TMEM116-202ENST00000437003 PTPRQQ9UMZ3 2332 aa9.66□□□□□ -0.86
TMEM116-202ENST00000437003 NPIPB5A8MRT5 1133 aa9.66□□□□□ -0.86
TMEM116-202ENST00000437003 E9PLD3 99 aa9.66□□□□□ -0.86
TMEM116-202ENST00000437003 EGR2P11161 476 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-202ENST00000437003 KLF17Q5JT82 389 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-202ENST00000437003 SHANK2-AS3Q9BTD1 123 aa9.66□□□□□ -0.86
TMEM116-202ENST00000437003 TMEM8BA6NDV4 472 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 F8W1H4 67 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 MAPKAPK5-AS1Q8N8E1 139 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 MAP1LC3AQ9H492 121 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 HIGD1BQ9P298 99 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 UFC1Q9Y3C8 167 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 TRAV40A0A0B4J280 105 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 TRBV6-1A0A0K0K1D8 114 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 K7ENP7 123 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 CRYGBP07316 175 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 IGFL4Q6B9Z1 124 aa9.65□□□□□ -0.86
TMEM116-202ENST00000437003 FAM90A27PA6NNH2 459 aa9.64□□□□□ -0.87
TMEM116-202ENST00000437003 PTH2Q96A98 100 aa9.64□□□□□ -0.87
TMEM116-202ENST00000437003 SPATA25Q9BR10 227 aa9.64□□□□□ -0.87
TMEM116-202ENST00000437003 H3BRN7 92 aa9.64□□□□□ -0.87
TMEM116-202ENST00000437003 TIMM23O14925 209 aa9.64□□□□□ -0.87
TMEM116-202ENST00000437003 SRSF1Q07955 248 aaKnown RBP eCLIP9.64□□□□□ -0.87
TMEM116-202ENST00000437003 TMEM158Q8WZ71 300 aa9.64□□□□□ -0.87
TMEM116-202ENST00000437003 RAX2Q96IS3 184 aa9.64□□□□□ -0.87
TMEM116-202ENST00000437003 AAMDCQ9H7C9 122 aa9.64□□□□□ -0.87
TMEM116-202ENST00000437003 I3L2K1 104 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 GRNP28799 593 aaKnown RBP9.63□□□□□ -0.87
TMEM116-202ENST00000437003 ZNF80P51504 273 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-202ENST00000437003 MRPL23Q16540 153 aaKnown RBP9.63□□□□□ -0.87
TMEM116-202ENST00000437003 C12orf74Q32Q52 190 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 GAGE13Q4V321 117 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 TCTEX1D4Q5JR98 221 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 PVRIGQ6DKI7 326 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 C20orf78Q9BR46 151 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 A0A1B0GWB2 263 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 DPM2O94777 84 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 ORM1P02763 201 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 HES1Q14469 280 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 HIST1H4GQ99525 98 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 MRPL35Q9NZE8 188 aaKnown RBP9.63□□□□□ -0.87
TMEM116-202ENST00000437003 SFTA2Q6UW10 78 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 ZNF491Q8N8L2 437 aa9.63□□□□□ -0.87
TMEM116-202ENST00000437003 RNF185Q96GF1 192 aa9.62□□□□□ -0.87
TMEM116-202ENST00000437003 C1orf43Q9BWL3 253 aa9.62□□□□□ -0.87
TMEM116-202ENST00000437003 ZMAT4Q9H898 229 aa9.62□□□□□ -0.87
TMEM116-202ENST00000437003 KLRD1Q13241 179 aa9.62□□□□□ -0.87
TMEM116-202ENST00000437003 ZNF672Q499Z4 452 aaPredicted RBP9.62□□□□□ -0.87
TMEM116-202ENST00000437003 ATRXP46100 2492 aa9.61□□□□□ -0.87
TMEM116-202ENST00000437003 NDUFA3O95167 84 aa9.61□□□□□ -0.87
TMEM116-202ENST00000437003 IGHV3-23P01764 117 aa9.61□□□□□ -0.87
TMEM116-202ENST00000437003 K7EIM0 57 aa9.61□□□□□ -0.87
TMEM116-202ENST00000437003 HLA-DMBP28068 263 aa9.61□□□□□ -0.87
TMEM116-202ENST00000437003 SEC61GP60059 68 aa9.61□□□□□ -0.87
TMEM116-202ENST00000437003 AKAP6Q13023 2319 aa9.61□□□□□ -0.87
TMEM116-202ENST00000437003 PRR25Q96S07 402 aa9.61□□□□□ -0.87
TMEM116-202ENST00000437003 VPREB3Q9UKI3 123 aa9.61□□□□□ -0.87
TMEM116-202ENST00000437003 SPTBN1Q01082 2364 aaKnown RBP9.6□□□□□ -0.87
TMEM116-202ENST00000437003 COL6A6A6NMZ7 2263 aa9.6□□□□□ -0.87
TMEM116-202ENST00000437003 MRPS12O15235 138 aaKnown RBP9.6□□□□□ -0.87
TMEM116-202ENST00000437003 APOMO95445 188 aa9.6□□□□□ -0.87
TMEM116-202ENST00000437003 PF4P02776 101 aa9.6□□□□□ -0.87
TMEM116-202ENST00000437003 LYPD1Q8N2G4 141 aa9.6□□□□□ -0.87
TMEM116-202ENST00000437003 TTC9CQ8N5M4 171 aa9.6□□□□□ -0.87
TMEM116-202ENST00000437003 PIFOQ8TCI5 191 aa9.6□□□□□ -0.87
TMEM116-202ENST00000437003 IGHV3OR16-8A0A075B7F1 116 aa9.6□□□□□ -0.87
TMEM116-202ENST00000437003 CCL21O00585 134 aa9.59□□□□□ -0.87
TMEM116-202ENST00000437003 SYT8Q8NBV8 401 aa9.59□□□□□ -0.87
TMEM116-202ENST00000437003 LY6LH3BQJ8 138 aa9.59□□□□□ -0.87
TMEM116-202ENST00000437003 RRN3P1Q2M238 152 aa9.59□□□□□ -0.87
TMEM116-202ENST00000437003 SRSF8Q9BRL6 282 aaKnown RBP9.59□□□□□ -0.87
TMEM116-202ENST00000437003 PRO0461Q9UI25 63 aa9.59□□□□□ -0.87
TMEM116-202ENST00000437003 TRAV26-2A0A0B4J265 109 aa9.58□□□□□ -0.88
TMEM116-202ENST00000437003 IGHV3-35A0A0C4DH35 117 aa9.58□□□□□ -0.88
TMEM116-202ENST00000437003 IGLC6P0CF74 106 aa9.58□□□□□ -0.88
TMEM116-202ENST00000437003 EFNA4P52798 201 aa9.58□□□□□ -0.88
TMEM116-202ENST00000437003 RNF5Q99942 180 aa9.58□□□□□ -0.88
TMEM116-202ENST00000437003 NXT2Q9NPJ8 142 aaKnown RBP9.58□□□□□ -0.88
TMEM116-202ENST00000437003 IGF2RP11717 2491 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms