RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 EML5Q05BV3 1969 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 TOPAZ1Q8N9V7 1692 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 PXDNLA1KZ92 1463 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 NYNRINQ9P2P1 1898 aaKnown RBP1.58□□□□□ -2.16
CLK1-204ENST00000432425 PRDM15P57071 1507 aaPredicted RBP1.58□□□□□ -2.16
CLK1-204ENST00000432425 PREX2Q70Z35 1606 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 TRPM1Q7Z4N2 1603 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 IGLV3-9A0A075B6K5 115 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 IGHV3OR15-7A0A075B7D8 119 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 MDFIC2A0A1B0GVS7 189 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 ZNF737O75373 536 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 CFDP00746 253 aaPredicted RBP1.58□□□□□ -2.16
CLK1-204ENST00000432425 TRGV3P03979 118 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 IGHV1-8P0DP01 117 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 CCL3P10147 92 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 SLC25A4P12235 298 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 COX7CP15954 63 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 INSL4Q14641 139 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 CDK5R1Q15078 307 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 MRPL51Q4U2R6 128 aaKnown RBP1.58□□□□□ -2.16
CLK1-204ENST00000432425 ZNF678Q5SXM1 525 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 LINC01545Q5VT33 79 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 MED12LQ86YW9 2145 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 TMEM256Q8N2U0 113 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 ATP6V0E2Q8NHE4 81 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 ZNF431Q8TF32 576 aaPredicted RBP1.58□□□□□ -2.16
CLK1-204ENST00000432425 COPS9Q8WXC6 57 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 S100A16Q96FQ6 103 aaKnown RBP1.58□□□□□ -2.16
CLK1-204ENST00000432425 CAMK2N2Q96S95 79 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 AMELYQ99218 206 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 PMCHL2Q9BQD1 86 aa1.58□□□□□ -2.16
CLK1-204ENST00000432425 THADAQ6YHU6 1953 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 CASP8AP2Q9UKL3 1982 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 DIDO1Q9BTC0 2240 aaKnown RBP1.57□□□□□ -2.16
CLK1-204ENST00000432425 A0A1B0GUL6 1792 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 LAMB4A4D0S4 1761 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 ARFGEF2Q9Y6D5 1785 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 IGHV3-43A0A0B4J1X8 118 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 IGHV5-10-1A0A0J9YXX1 117 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 TMEM223A0PJW6 202 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 A6NED7 52 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 FAM24AA6NFZ4 105 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 ZNF705FA8MVS1 300 aaPredicted RBP1.57□□□□□ -2.16
CLK1-204ENST00000432425 A8MWP4 228 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 C3orf84H3BNL1 204 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 TIMM17BO60830 172 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 SHBGP04278 402 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 ZNF705BP0CI00 300 aaPredicted RBP1.57□□□□□ -2.16
CLK1-204ENST00000432425 COX6A1P12074 109 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 CCL5P13501 91 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 ADCYAP1P18509 176 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 CBLN1P23435 193 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 BLCAPP62952 87 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 DYNLT1P63172 113 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 FUT5Q11128 374 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 CIRBPQ14011 172 aaKnown RBP1.57□□□□□ -2.16
CLK1-204ENST00000432425 NOXRED1Q6NXP6 359 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 MIR17HGQ75NE6 70 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 ZFAND2AQ8N6M9 145 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 SIGLECL1Q8N7X8 197 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 FAM213BQ8TBF2 198 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 CLEC2BQ92478 149 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 MCEEQ96PE7 176 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 YPEL2Q96QA6 119 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 DPH3P1Q9H4G8 78 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 C11orf1Q9H5F2 150 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 LCTP09848 1927 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 CASKIN1Q8WXD9 1431 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 PRXQ9BXM0 1461 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 LAMC3Q9Y6N6 1575 aa1.57□□□□□ -2.16
CLK1-204ENST00000432425 TARBP1Q13395 1621 aaKnown RBP1.56□□□□□ -2.16
CLK1-204ENST00000432425 ABCA9Q8IUA7 1624 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 WDR90Q96KV7 1748 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 KDM3BQ7LBC6 1761 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 TANC1Q9C0D5 1861 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.56□□□□□ -2.16
CLK1-204ENST00000432425 IGHV7-4-1A0A0J9YVY3 117 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 hADV29S1A0JD25 119 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 C19orf71A6NCJ1 209 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 A6NN06 94 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 A8MWL6 223 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 F8W1H4 67 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 M0R233 179 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 HYPMO75409 117 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 SIX6O95475 246 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 SOD1P00441 154 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 IGKV1D-33P01593 117 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 IGKV1-33P01594 117 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 IGHV3-7P01780 117 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 IGLC2P0DOY2 106 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 IGLC3P0DOY3 106 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 NPPCP23582 126 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 RPL27AP46776 148 aaKnown RBP1.56□□□□□ -2.16
CLK1-204ENST00000432425 KRTAP12-3P60328 96 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 AMN1Q8IY45 258 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 OR5AS1Q8N127 324 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 APCDD1LQ8NCL9 501 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 TSKUQ8WUA8 353 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 FGF13Q92913 245 aa1.56□□□□□ -2.16
CLK1-204ENST00000432425 GABARAPL1Q9H0R8 117 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms