RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 EPM2AB3EWF7 344 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 TGFBR1P36897 503 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 ZNF124Q15973 351 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 MRPL16Q9NX20 251 aaKnown RBP3.36□□□□□ -1.87
UBE4A-202ENST00000431736 NBDYA0A0U1RRE5 68 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 HSBP1L1C9JCN9 74 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 DIRC3C9JPN6 131 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 IGHV3-30P01768 117 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 IGHV3-33P01772 117 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 ZNF705DP0CH99 300 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-202ENST00000431736 ZNF705BP0CI00 300 aaPredicted RBP3.36□□□□□ -1.87
UBE4A-202ENST00000431736 IGHV3-30-3P0DP02 117 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 IGHV3-30-5P0DP03 117 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 RAB5AP20339 215 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 MYO15AQ9UKN7 3530 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 COL12A1Q99715 3063 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 A0A1W2PPQ1 181 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 C19orf54Q5BKX5 351 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 IGFL4Q6B9Z1 124 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 THAP8Q8NA92 274 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 GAGE12JA6NER3 117 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 FABP5P3A8MUU1 101 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 B4DEV8 164 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 GCGP01275 180 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 GAGE1Q13065 139 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 GAGE4Q13068 117 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 GAGE5Q13069 117 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 FCN2Q15485 313 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 MLANAQ16655 118 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 GAGE13Q4V321 117 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 PPP1R1CQ8WVI7 109 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 UBE2WQ96B02 151 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 IGKV1-17P01599 117 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 RAB32Q13637 225 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 LGALS9BQ3B8N2 356 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 CYB561D1Q8N8Q1 229 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 DNAH14Q0VDD8 3507 aa3.36□□□□□ -1.87
UBE4A-202ENST00000431736 TMSB15BA0A087X1C1 80 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 MT-ND4LP03901 98 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 GIPP09681 153 aaPredicted RBP3.35□□□□□ -1.87
UBE4A-202ENST00000431736 EWSR1Q01844 656 aaKnown RBP eCLIP3.35□□□□□ -1.87
UBE4A-202ENST00000431736 RBMY1FQ15415 496 aaKnown RBP3.35□□□□□ -1.87
UBE4A-202ENST00000431736 ZNF876PQ49A33 203 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 SPATA12Q7Z6I5 190 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 M0R381 172 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 SNCGO76070 127 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 AKR1D1P51857 326 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 SUMO1P63165 101 aaKnown RBP3.35□□□□□ -1.87
UBE4A-202ENST00000431736 LRTM2Q8N967 370 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 IGKV2-40A0A087WW87 121 aaPredicted RBP3.35□□□□□ -1.87
UBE4A-202ENST00000431736 UMAD1C9J7I0 102 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 IGKV2D-40P01614 121 aaPredicted RBP3.35□□□□□ -1.87
UBE4A-202ENST00000431736 MED14OSP0DP75 135 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 SLC51BQ86UW2 128 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 TMEM252Q8N6L7 170 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 Q8N976 141 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 ISOC2Q96AB3 205 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 AP1S3Q96PC3 154 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 ODF3Q96PU9 254 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 PCP4L1A6NKN8 68 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 ZNF727A8MUV8 499 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 RS1O15537 224 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 HLA-DQA1P01909 254 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 APOC3P02656 99 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 GNG4P50150 75 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 MBPP02686 304 aaPredicted RBP3.35□□□□□ -1.87
UBE4A-202ENST00000431736 CXCL3P19876 107 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 RTBDNQ9BSG5 229 aaPredicted RBP3.35□□□□□ -1.87
UBE4A-202ENST00000431736 SAMD10Q9BYL1 202 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 RPS10P5Q9NQ39 176 aa3.35□□□□□ -1.87
UBE4A-202ENST00000431736 CHTOPQ9Y3Y2 248 aaKnown RBP3.35□□□□□ -1.87
UBE4A-202ENST00000431736 MAP1LC3B2A6NCE7 125 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 ZNF253O75346 499 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 APOMO95445 188 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 APOHP02749 345 aaPredicted RBP3.34□□□□□ -1.87
UBE4A-202ENST00000431736 RAB5CP51148 216 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 C12orf74Q32Q52 190 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 LHFPL1Q86WI0 220 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 HIST1H2BAQ96A08 127 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 SGK494Q96LW2 274 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 LINC00479Q96M42 142 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 MAP1LC3BQ9GZQ8 125 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 CTDSP1Q9GZU7 261 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 LENEPQ9Y5L5 61 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 DMDP11532 3685 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 TRBV25-1A0A075B6N4 114 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 IGHV3-73A0A0B4J1V6 119 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 P01737 135 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 SMIM7Q9BQ49 75 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 DCHS1Q96JQ0 3298 aa3.34□□□□□ -1.87
UBE4A-202ENST00000431736 UTP20O75691 2785 aaKnown RBP3.34□□□□□ -1.87
UBE4A-202ENST00000431736 ANGP03950 147 aaKnown RBP3.34□□□□□ -1.87
UBE4A-202ENST00000431736 CDPF1Q6NVV7 123 aa3.34□□□□□ -1.88
UBE4A-202ENST00000431736 ALKAL2Q6UX46 152 aa3.34□□□□□ -1.88
UBE4A-202ENST00000431736 MAPKAPK5-AS1Q8N8E1 139 aa3.34□□□□□ -1.88
UBE4A-202ENST00000431736 TSKUQ8WUA8 353 aa3.34□□□□□ -1.88
UBE4A-202ENST00000431736 SLIRPQ9GZT3 109 aaKnown RBP3.34□□□□□ -1.88
UBE4A-202ENST00000431736 IGHV3-16A0A0C4DH30 117 aa3.33□□□□□ -1.88
UBE4A-202ENST00000431736 IGHV3-38A0A0C4DH36 116 aa3.33□□□□□ -1.88
UBE4A-202ENST00000431736 E7EUB6 86 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms