RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 PIK3CD-AS1Q5SR53 167 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 C10orf128Q5T292 105 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 SLC48A1Q6P1K1 146 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 ADGRB1O14514 1584 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 DOPEY2Q9Y3R5 2298 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 MRC1P22897 1456 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 WT1P19544 449 aaPredicted RBP4.14□□□□□ -1.75
PTPN4-203ENST00000430976 GNB1P62873 340 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 ZNF329Q86UD4 541 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 LTN1O94822 1766 aa4.14□□□□□ -1.75
PTPN4-203ENST00000430976 F8WEM9 126 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 HMGN2P05204 90 aaKnown RBP4.13□□□□□ -1.75
PTPN4-203ENST00000430976 P0DMU3 169 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 FAM231AP0DMU4 169 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 FAM231CP0DMU5 169 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 LMO2P25791 158 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 TOMM6Q96B49 74 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 UPK3BQ9BT76 320 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 PSENENQ9NZ42 101 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 NCOA6Q14686 2063 aaPredicted RBP4.13□□□□□ -1.75
PTPN4-203ENST00000430976 KIF26AQ9ULI4 1882 aaPredicted RBP4.13□□□□□ -1.75
PTPN4-203ENST00000430976 TRAV23DV6A0A075B6W5 121 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 PIGBOS1A0A0B4J2F0 54 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 INAFM1C9JVW0 142 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 M0R3E3 92 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 ZNF491Q8N8L2 437 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 CYYR1Q96J86 154 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 DEC1Q9P2X7 70 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 DUOX1Q9NRD9 1551 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 LAMB1P07942 1786 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 FAM120AOSQ5T036 256 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 TMEM61Q8N0U2 210 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 CYSTM1Q9H1C7 97 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 DEFB127Q9H1M4 99 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 TRBV7-7A0A0K0K1E9 115 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 CTXND1A0A1B0GTU2 59 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 BUB1B-PAK6H3BSN5 160 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 CGAP01215 116 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 ZNF117Q03924 483 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 VN1R4Q7Z5H5 301 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 ZNF689Q96CS4 500 aaPredicted RBP4.13□□□□□ -1.75
PTPN4-203ENST00000430976 CCL13Q99616 98 aa4.13□□□□□ -1.75
PTPN4-203ENST00000430976 FRMPD3Q5JV73 1810 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 B3GALT5-AS1P59052 145 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 PLA2G2CQ5R387 149 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 PIFOQ8TCI5 191 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 ZNF355PQ9NSJ1 428 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 BTAF1O14981 1849 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 CEP290O15078 2479 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 TRAV21A0A0B4J279 112 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 RPS21P63220 83 aaKnown RBP4.12□□□□□ -1.75
PTPN4-203ENST00000430976 FHL2Q14192 279 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 IGFL3Q6UXB1 125 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 FP248Q71RG6 208 aaPredicted RBP4.12□□□□□ -1.75
PTPN4-203ENST00000430976 SPACA3Q8IXA5 215 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 RALGAPA2Q2PPJ7 1873 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 C2CD4DB7Z1M9 353 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 ACYP1P07311 99 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 C19orf54Q5BKX5 351 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 FAM53AQ6NSI3 398 aaPredicted RBP4.12□□□□□ -1.75
PTPN4-203ENST00000430976 C5orf38Q86SI9 138 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 DOCK2Q92608 1830 aa4.12□□□□□ -1.75
PTPN4-203ENST00000430976 PDCD11Q14690 1871 aaKnown RBP4.11□□□□□ -1.75
PTPN4-203ENST00000430976 A0A0B4J2C4 111 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 C1orf158Q8N1D5 194 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 TRGV9Q99603 122 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 A0A087WVE0 104 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 GDF5OSQ5U4N7 250 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 PVRIGQ6DKI7 326 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 UBALD1Q8TB05 177 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 IFI27L1Q96BM0 104 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 WDR90Q96KV7 1748 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 PIK3C2AO00443 1686 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 J3QRE1 110 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 WISP3O95389 354 aaPredicted RBP4.11□□□□□ -1.75
PTPN4-203ENST00000430976 IGKV1-16P04430 117 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 CISD3P0C7P0 127 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 NPPCP23582 126 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 XCL1P47992 114 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 PRB3Q04118 309 aaPredicted RBP4.11□□□□□ -1.75
PTPN4-203ENST00000430976 XCL2Q9UBD3 114 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 ANAPC1Q9H1A4 1944 aa4.11□□□□□ -1.75
PTPN4-203ENST00000430976 ARFGEF3Q5TH69 2177 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 C5orf67F2Z3F1 127 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 SPINK9Q5DT21 86 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 NRACQ8N912 160 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 RETNLBQ9BQ08 111 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 BPESC1Q9GZL8 116 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 PKDREJQ9NTG1 2253 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 VWA8A3KMH1 1905 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 LOC100131303A0A0U1RQF7 123 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 PRM2P04554 102 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 MRPS36P82909 103 aaKnown RBP4.1□□□□□ -1.75
PTPN4-203ENST00000430976 KISS1Q15726 138 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 FOXL2NBQ6ZUU3 175 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 TM2D3Q9BRN9 247 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 CEP250Q9BV73 2442 aa4.1□□□□□ -1.75
PTPN4-203ENST00000430976 SPTBN1Q01082 2364 aaKnown RBP4.1□□□□□ -1.75
PTPN4-203ENST00000430976 ASXL3Q9C0F0 2248 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms