RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 PRR9Q5T870 116 aa10.59□□□□□ -0.71
HOXC4-202ENST00000430889 FAM19A4Q96LR4 140 aa10.59□□□□□ -0.71
HOXC4-202ENST00000430889 BEX4Q9NWD9 120 aaPredicted RBP10.59□□□□□ -0.71
HOXC4-202ENST00000430889 A0A096LNJ9 63 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 MUC21A0A0G2JKD1 596 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 MUC21A0A140T8X8 626 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 SYS1-DBNDD2H3BUS1 97 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 K7EMT4 169 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 LEPROTL1O95214 131 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 TGFAP01135 160 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 IGLC3P0DOY3 106 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 MUC21Q5SSG8 566 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 ORMDL3Q8N138 153 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 LRRC75A-AS1Q8N1F1 130 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 MAPK1IP1LQ8NDC0 245 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 PRELID3AQ96N28 172 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 AP5S1Q9NUS5 200 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 MSRB1Q9NZV6 116 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 CSMD2Q7Z408 3487 aa10.58□□□□□ -0.72
HOXC4-202ENST00000430889 RNF223E7ERA6 249 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 CSN3P07498 182 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 TWIST1Q15672 202 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 ZFAND2AQ8N6M9 145 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 MYOZ3Q8TDC0 251 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 DAZ1Q9NQZ3 744 aaKnown RBP10.57□□□□□ -0.72
HOXC4-202ENST00000430889 SIGLEC8Q9NYZ4 499 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 PEF1Q9UBV8 284 aaKnown RBP10.57□□□□□ -0.72
HOXC4-202ENST00000430889 MAP1AP78559 2803 aaPredicted RBP10.57□□□□□ -0.72
HOXC4-202ENST00000430889 IGHV4-4A0A075B6R2 117 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 TRAV9-2A0A087WT02 112 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 C20orf202A1L168 122 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 OVOL1O14753 267 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 SNAI2O43623 268 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 FOXE3Q13461 319 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 MAJINQ3KP22 176 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 TM4SF20Q53R12 229 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 Q6YL49 198 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 Q6ZQT7 251 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 APRG1Q8IVJ8 170 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 ZNF738Q8NE65 137 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 LINC00477Q96M19 166 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 SMPXQ9UHP9 88 aa10.57□□□□□ -0.72
HOXC4-202ENST00000430889 A0A1B0GV90 55 aa10.56□□□□□ -0.72
HOXC4-202ENST00000430889 LINC01546A6NGU7 62 aa10.56□□□□□ -0.72
HOXC4-202ENST00000430889 M0R143 59 aa10.56□□□□□ -0.72
HOXC4-202ENST00000430889 IFI27P40305 119 aaPredicted RBP10.56□□□□□ -0.72
HOXC4-202ENST00000430889 DEFB113Q30KQ7 82 aa10.56□□□□□ -0.72
HOXC4-202ENST00000430889 FAM106AQ4KMX7 169 aa10.56□□□□□ -0.72
HOXC4-202ENST00000430889 C10orf99Q6UWK7 81 aa10.56□□□□□ -0.72
HOXC4-202ENST00000430889 KRTAP1-3Q8IUG1 177 aa10.56□□□□□ -0.72
HOXC4-202ENST00000430889 ATOH7Q8N100 152 aa10.56□□□□□ -0.72
HOXC4-202ENST00000430889 RHPN1-AS1Q9BWJ2 59 aa10.56□□□□□ -0.72
HOXC4-202ENST00000430889 VPREB3Q9UKI3 123 aa10.56□□□□□ -0.72
HOXC4-202ENST00000430889 ZANQ9Y493 2812 aa10.55□□□□□ -0.72
HOXC4-202ENST00000430889 NPYP01303 97 aa10.55□□□□□ -0.72
HOXC4-202ENST00000430889 PET117Q6UWS5 81 aa10.55□□□□□ -0.72
HOXC4-202ENST00000430889 ZNF705AQ6ZN79 300 aaPredicted RBP10.55□□□□□ -0.72
HOXC4-202ENST00000430889 FA2HQ7L5A8 372 aa10.55□□□□□ -0.72
HOXC4-202ENST00000430889 ZNF747Q9BV97 191 aa10.55□□□□□ -0.72
HOXC4-202ENST00000430889 HSPB8Q9UJY1 196 aa10.55□□□□□ -0.72
HOXC4-202ENST00000430889 TRBV7-9A0A0J9YWB2 115 aa10.54□□□□□ -0.72
HOXC4-202ENST00000430889 EDN2P20800 178 aa10.54□□□□□ -0.72
HOXC4-202ENST00000430889 SSTP61278 116 aa10.54□□□□□ -0.72
HOXC4-202ENST00000430889 PRSS3P2Q8NHM4 247 aa10.54□□□□□ -0.72
HOXC4-202ENST00000430889 ZNF702PQ9H963 129 aa10.54□□□□□ -0.72
HOXC4-202ENST00000430889 UQCR10Q9UDW1 63 aa10.54□□□□□ -0.72
HOXC4-202ENST00000430889 LRRK2Q5S007 2527 aa10.54□□□□□ -0.72
HOXC4-202ENST00000430889 OR4C46A6NHA9 309 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 SMKR1H3BMG3 65 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 PPBPP02775 128 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 IGLL1P15814 213 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 LINC01545Q5VT33 79 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 OR10AG1Q8NH19 301 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 LAMTOR2Q9Y2Q5 125 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 USP9YO00507 2555 aaPredicted RBP10.53□□□□□ -0.72
HOXC4-202ENST00000430889 GAS8-AS1O95177 125 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 CKS2P33552 79 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 DEFB1P60022 68 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 Q5PR19 223 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 PRSS57Q6UWY2 283 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 KLHDC1Q8N7A1 406 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 RNF152Q8N8N0 203 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 OR8A1Q8NGG7 326 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 OR10J6PQ8NGY7 276 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 DCANP1Q8TF63 244 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 MAP1LC3CQ9BXW4 147 aa10.53□□□□□ -0.72
HOXC4-202ENST00000430889 NCR2O95944 276 aa10.52□□□□□ -0.73
HOXC4-202ENST00000430889 POLQO75417 2590 aa10.52□□□□□ -0.73
HOXC4-202ENST00000430889 PTPN13Q12923 2485 aa10.51□□□□□ -0.73
HOXC4-202ENST00000430889 LOC389332A0A1B0GUA5 103 aa10.51□□□□□ -0.73
HOXC4-202ENST00000430889 TCF21O43680 179 aa10.51□□□□□ -0.73
HOXC4-202ENST00000430889 NUTF2P61970 127 aaKnown RBP10.51□□□□□ -0.73
HOXC4-202ENST00000430889 DEFB125Q8N687 156 aa10.51□□□□□ -0.73
HOXC4-202ENST00000430889 TRAV21A0A0B4J279 112 aa10.5□□□□□ -0.73
HOXC4-202ENST00000430889 RPLP1P05386 114 aaKnown RBP10.5□□□□□ -0.73
HOXC4-202ENST00000430889 ELANEP08246 267 aa10.5□□□□□ -0.73
HOXC4-202ENST00000430889 CACNG7P62955 275 aa10.5□□□□□ -0.73
HOXC4-202ENST00000430889 UFC1Q9Y3C8 167 aa10.5□□□□□ -0.73
HOXC4-202ENST00000430889 PRSS47A8MTI9 375 aa10.5□□□□□ -0.73
HOXC4-202ENST00000430889 F6UB75 175 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms