RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 THYN1Q9P016 225 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 DPM3Q9P2X0 92 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 U3KQK5 164 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 CLPSL1A2RUU4 121 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 RIGQ13278 110 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 TWIST1Q15672 202 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 PRR9Q5T870 116 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 OR11H6Q8NGC7 330 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 ARPC1AQ92747 370 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 RAB37Q96AX2 223 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 IGHV3OR16-10A0A075B7F0 116 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 IGKV3D-20A0A0C4DH25 116 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 TRBV6-1A0A0K0K1D8 114 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 K7ERJ3 54 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 IGLC6P0CF74 106 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 KIR3DS1Q14943 382 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 ECSCRQ19T08 205 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 Q8N6K4 173 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 NPBQ8NG41 125 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 OR10AG1Q8NH19 301 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 CST9LQ9H4G1 147 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 PPP1R14DQ9NXH3 145 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 C21orf62Q9NYP8 219 aa5.53□□□□□ -1.52
COL28A1-202ENST00000430711 C7orf71A4D174 169 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 J3KRW8 73 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 NMUP48645 174 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 HIST1H1AQ02539 215 aaPredicted RBP5.52□□□□□ -1.53
COL28A1-202ENST00000430711 Q8N9W7 124 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 CCDC140Q96MF4 163 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 TRAV30A0A087WSZ9 112 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 TRAV8-2A0A0B4J237 113 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 ATP6V0E1O15342 81 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 TMEM11P17152 192 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 EDN2P20800 178 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 FAM162BQ5T6X4 162 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 C11orf71Q6IPW1 123 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 ADAMTSL5Q6ZMM2 481 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 HSPB8Q9UJY1 196 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 AGRNO00468 2067 aa5.52□□□□□ -1.53
COL28A1-202ENST00000430711 TRBV12-3P01733 135 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 ORM1P02763 201 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 CKS2P33552 79 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 MFAP4P55083 255 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 C15orf32Q32M92 178 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 TMEM97Q5BJF2 176 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 TMEM219Q86XT9 240 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 ORMDL3Q8N138 153 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 FER1L6-AS1Q8NA97 138 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 SPG11Q96JI7 2443 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 ITPR3Q14573 2671 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 CENPEQ02224 2701 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 HSBP1L1C9JCN9 74 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 H3BUT2 72 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 CT45A10P0DMU9 189 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 FXYD2P54710 66 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 ZNF562Q6V9R5 426 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 LCNL1Q6ZST4 164 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 BOD1L2Q8IYS8 172 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 TTC9CQ8N5M4 171 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 VKORC1Q9BQB6 163 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 HHLA3Q9XRX5 114 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 CBY1Q9Y3M2 126 aa5.51□□□□□ -1.53
COL28A1-202ENST00000430711 MXRA5Q9NR99 2828 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 CD5LO43866 347 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 HBDP02042 147 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 CLEC3BP05452 202 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 PRTN3P24158 256 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 CDKN1BP46527 198 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 EFNA4P52798 201 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 OCIAD2Q56VL3 154 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 UFSP1Q6NVU6 142 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 CLEC19AQ6UXS0 136 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 MAPKAPK5-AS1Q8N8E1 139 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 IFI27L1Q96BM0 104 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 C20orf173Q96LM9 149 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 AGPAT4-IT1Q9H0P7 198 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 AAMDCQ9H7C9 122 aa5.5□□□□□ -1.53
COL28A1-202ENST00000430711 GAGE12BA1L429 117 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 K7ENP7 123 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 SMAD7O15105 426 aaKnown RBP5.49□□□□□ -1.53
COL28A1-202ENST00000430711 LEPP41159 167 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 CSN1S1P47710 185 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 GTSCR1Q86UQ5 136 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 DTX2Q86UW9 622 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 LYPD1Q8N2G4 141 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 MS4A6AQ9H2W1 248 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 ZNF469Q96JG9 3925 aaPredicted RBP5.49□□□□□ -1.53
COL28A1-202ENST00000430711 IGLV2-18A0A075B6J9 118 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 IGHV7-4-1A0A0J9YVY3 117 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 FBLL1A6NHQ2 334 aaKnown RBP5.49□□□□□ -1.53
COL28A1-202ENST00000430711 K7EQM0 130 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 BUB3O43684 328 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 TNFRSF6BO95407 300 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 ODF1Q14990 250 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 OR2K2Q8NGT1 345 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 ZNF502Q8TBZ5 544 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 SIRPDQ9H106 197 aa5.49□□□□□ -1.53
COL28A1-202ENST00000430711 NOTCH2Q04721 2471 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms