RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 SRD5A1P18405 259 aa10.8□□□□□ -0.68
SGMS1-203ENST00000429490 CRIP1P50238 77 aa10.8□□□□□ -0.68
SGMS1-203ENST00000429490 PAX2Q02962 417 aa10.8□□□□□ -0.68
SGMS1-203ENST00000429490 ETDBQ3ZM63 59 aa10.8□□□□□ -0.68
SGMS1-203ENST00000429490 TMEM219Q86XT9 240 aa10.8□□□□□ -0.68
SGMS1-203ENST00000429490 C7orf69Q9H7B7 122 aa10.79□□□□□ -0.68
SGMS1-203ENST00000429490 MRPL35Q9NZE8 188 aaKnown RBP10.79□□□□□ -0.68
SGMS1-203ENST00000429490 G3V318 75 aa10.79□□□□□ -0.68
SGMS1-203ENST00000429490 PPBPP02775 128 aa10.79□□□□□ -0.68
SGMS1-203ENST00000429490 FXYD2P54710 66 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 ADAMTSL5Q6ZMM2 481 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 OR5A1Q8NGJ0 315 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 A0A1W2PPM0 123 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 K7EP34 96 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 PSMB2P49721 201 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 FOXE3Q13461 319 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 VMO1Q7Z5L0 202 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 DYNAPQ8N1N2 210 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 LINC00574Q9H8X3 128 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 RAXQ9Y2V3 346 aa10.78□□□□□ -0.68
SGMS1-203ENST00000429490 IGLV1-47P01700 117 aa10.77□□□□□ -0.68
SGMS1-203ENST00000429490 PF4V1P10720 104 aa10.77□□□□□ -0.68
SGMS1-203ENST00000429490 CD300EQ496F6 205 aaPredicted RBP10.77□□□□□ -0.68
SGMS1-203ENST00000429490 DTX2Q86UW9 622 aa10.77□□□□□ -0.68
SGMS1-203ENST00000429490 PRAC2D3DTV9 90 aa10.77□□□□□ -0.69
SGMS1-203ENST00000429490 NPIPB6E9PJ23 425 aa10.77□□□□□ -0.69
SGMS1-203ENST00000429490 H3BMG7 143 aa10.77□□□□□ -0.69
SGMS1-203ENST00000429490 ZNF80P51504 273 aaPredicted RBP10.77□□□□□ -0.69
SGMS1-203ENST00000429490 OR10J6PQ8NGY7 276 aa10.77□□□□□ -0.69
SGMS1-203ENST00000429490 IGLV2-11P01706 119 aa10.77□□□□□ -0.69
SGMS1-203ENST00000429490 TMEM170BQ5T4T1 132 aa10.77□□□□□ -0.69
SGMS1-203ENST00000429490 C14orf178Q8N769 122 aaPredicted RBP10.77□□□□□ -0.69
SGMS1-203ENST00000429490 TEX48A0A1B0GUV7 120 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 INS-IGF2F8WCM5 200 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 CRXO43186 299 aaPredicted RBP10.76□□□□□ -0.69
SGMS1-203ENST00000429490 USP9XQ93008 2570 aaPredicted RBP10.76□□□□□ -0.69
SGMS1-203ENST00000429490 SHISA9B4DS77 424 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 CIDEAO60543 219 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 PDE6HQ13956 83 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 ZNF562Q6V9R5 426 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 GAS8-AS1O95177 125 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 TRGV3P03979 118 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 RNASE4P34096 147 aaKnown RBP10.76□□□□□ -0.69
SGMS1-203ENST00000429490 LAGE3Q14657 143 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 CSTL1Q9H114 145 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 RELNP78509 3460 aa10.76□□□□□ -0.69
SGMS1-203ENST00000429490 AGRNO00468 2067 aa10.75□□□□□ -0.69
SGMS1-203ENST00000429490 FCN3O75636 299 aa10.75□□□□□ -0.69
SGMS1-203ENST00000429490 C2orf91Q6ZV80 131 aa10.75□□□□□ -0.69
SGMS1-203ENST00000429490 KAAG1Q9UBP8 84 aa10.75□□□□□ -0.69
SGMS1-203ENST00000429490 NEGR1Q7Z3B1 354 aa10.75□□□□□ -0.69
SGMS1-203ENST00000429490 COL12A1Q99715 3063 aa10.75□□□□□ -0.69
SGMS1-203ENST00000429490 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
SGMS1-203ENST00000429490 SRSF1Q07955 248 aaKnown RBP eCLIP10.74□□□□□ -0.69
SGMS1-203ENST00000429490 C3orf36Q3SXR2 165 aa10.74□□□□□ -0.69
SGMS1-203ENST00000429490 TRBV25-1A0A075B6N4 114 aa10.74□□□□□ -0.69
SGMS1-203ENST00000429490 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
SGMS1-203ENST00000429490 IGFL3Q6UXB1 125 aa10.74□□□□□ -0.69
SGMS1-203ENST00000429490 EEF1AKMT3Q96AZ1 226 aa10.74□□□□□ -0.69
SGMS1-203ENST00000429490 BEX4Q9NWD9 120 aaPredicted RBP10.74□□□□□ -0.69
SGMS1-203ENST00000429490 TSSC4Q9Y5U2 329 aaPredicted RBP10.74□□□□□ -0.69
SGMS1-203ENST00000429490 ZNF815PA8K554 130 aa10.73□□□□□ -0.69
SGMS1-203ENST00000429490 DEFB1P60022 68 aa10.73□□□□□ -0.69
SGMS1-203ENST00000429490 BOD1L2Q8IYS8 172 aa10.73□□□□□ -0.69
SGMS1-203ENST00000429490 CFHR4Q92496 578 aa10.73□□□□□ -0.69
SGMS1-203ENST00000429490 SIGMAR1Q99720 223 aa10.73□□□□□ -0.69
SGMS1-203ENST00000429490 ZNF256Q9Y2P7 627 aaPredicted RBP10.73□□□□□ -0.69
SGMS1-203ENST00000429490 SONP18583 2426 aaKnown RBP10.73□□□□□ -0.69
SGMS1-203ENST00000429490 FSTL3O95633 263 aa10.73□□□□□ -0.69
SGMS1-203ENST00000429490 CHTOPQ9Y3Y2 248 aaKnown RBP10.73□□□□□ -0.69
SGMS1-203ENST00000429490 SMG1Q96Q15 3661 aaKnown RBP10.73□□□□□ -0.69
SGMS1-203ENST00000429490 IGHV3-64A0A075B6Q5 118 aa10.73□□□□□ -0.69
SGMS1-203ENST00000429490 IGKV2D-26A0A0A0MRZ7 120 aa10.73□□□□□ -0.69
SGMS1-203ENST00000429490 GAGE13Q4V321 117 aa10.73□□□□□ -0.69
SGMS1-203ENST00000429490 RNF5Q99942 180 aa10.73□□□□□ -0.69
SGMS1-203ENST00000429490 RAI1Q7Z5J4 1906 aaPredicted RBP10.72□□□□□ -0.69
SGMS1-203ENST00000429490 HIVEP3Q5T1R4 2406 aa10.72□□□□□ -0.69
SGMS1-203ENST00000429490 TMEM238C9JI98 176 aa10.72□□□□□ -0.69
SGMS1-203ENST00000429490 ATP6V0E1O15342 81 aa10.72□□□□□ -0.69
SGMS1-203ENST00000429490 PRSS2P07478 247 aa10.72□□□□□ -0.69
SGMS1-203ENST00000429490 HERVK_113P61574 105 aa10.72□□□□□ -0.69
SGMS1-203ENST00000429490 PIP4P1Q86T03 277 aa10.72□□□□□ -0.69
SGMS1-203ENST00000429490 WFDC2Q14508 124 aa10.71□□□□□ -0.69
SGMS1-203ENST00000429490 AGPAT4-IT1Q9H0P7 198 aa10.71□□□□□ -0.69
SGMS1-203ENST00000429490 CCDC168Q8NDH2 2452 aa10.71□□□□□ -0.69
SGMS1-203ENST00000429490 FANCD2OSQ96PS1 177 aa10.71□□□□□ -0.69
SGMS1-203ENST00000429490 SLC50A1Q9BRV3 221 aa10.71□□□□□ -0.69
SGMS1-203ENST00000429490 CTSGP08311 255 aa10.71□□□□□ -0.7
SGMS1-203ENST00000429490 PRTN3P24158 256 aa10.71□□□□□ -0.7
SGMS1-203ENST00000429490 ASIPP42127 132 aa10.71□□□□□ -0.7
SGMS1-203ENST00000429490 RAB9AP51151 201 aa10.71□□□□□ -0.7
SGMS1-203ENST00000429490 PRO3102Q9H379 93 aa10.71□□□□□ -0.7
SGMS1-203ENST00000429490 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.7
SGMS1-203ENST00000429490 TMEM238LA0A1B0GVL6 79 aa10.7□□□□□ -0.7
SGMS1-203ENST00000429490 A6NJY4 79 aa10.7□□□□□ -0.7
SGMS1-203ENST00000429490 BRD3OSQ6XYD6 125 aa10.7□□□□□ -0.7
SGMS1-203ENST00000429490 C8orf31Q8N9H6 132 aa10.7□□□□□ -0.7
SGMS1-203ENST00000429490 HOXA3O43365 443 aaPredicted RBP10.7□□□□□ -0.7
SGMS1-203ENST00000429490 NPFFR1Q9GZQ6 430 aa10.7□□□□□ -0.7
SGMS1-203ENST00000429490 KHDC1LQ5JSQ8 128 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms