RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 F5H768 121 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 FAM106CPP0CH98 169 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 FAM106AQ4KMX7 169 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 FAM120AOSQ5T036 256 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 CLEC19AQ6UXS0 136 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 Q8N976 141 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 RABAC1Q9UI14 185 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 TRAV30A0A087WSZ9 112 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 LTAP01374 205 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 S100A4P26447 101 aaKnown RBP6.35□□□□□ -1.39
HPS4-205ENST00000429411 RASL11AQ6T310 242 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 COX11Q9Y6N1 276 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 C2orf70A6NJV1 201 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 C19orf84I3L1E1 186 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 SPRY2O43597 315 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 SH2D1AO60880 128 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 NDUFB8O95169 186 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 RPL7P18124 248 aaKnown RBP6.35□□□□□ -1.39
HPS4-205ENST00000429411 GCSHP23434 173 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 NDPQ00604 133 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 PSG3Q16557 428 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 HIST2H2BDQ6DRA6 164 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 TMEM219Q86XT9 240 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 LRRC75A-AS1Q8N1F1 130 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 FER1L6-AS1Q8NA97 138 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 SHANK2-AS3Q9BTD1 123 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 APCP25054 2843 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 NBPF19A0A087WUL8 3843 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 TEX22C9J3V5 150 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 ORMDL3Q8N138 153 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 LINC00311Q8N616 119 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 ZNF491Q8N8L2 437 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 PEMTQ9UBM1 199 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 STAB1Q9NY15 2570 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 CTRLP40313 264 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 LOXL1Q08397 574 aaPredicted RBP6.34□□□□□ -1.39
HPS4-205ENST00000429411 LY6EQ16553 131 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 CHCHD1Q96BP2 118 aaKnown RBP6.34□□□□□ -1.39
HPS4-205ENST00000429411 ZNF414Q96IQ9 312 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 CST9LQ9H4G1 147 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 MSRB1Q9NZV6 116 aa6.34□□□□□ -1.39
HPS4-205ENST00000429411 K7EIM0 57 aa6.34□□□□□ -1.4
HPS4-205ENST00000429411 WIPF1O43516 503 aa6.34□□□□□ -1.4
HPS4-205ENST00000429411 SPANXN1Q5VSR9 72 aa6.34□□□□□ -1.4
HPS4-205ENST00000429411 VGLL1Q99990 258 aa6.34□□□□□ -1.4
HPS4-205ENST00000429411 ZANQ9Y493 2812 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 GAGE10A6NGK3 116 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 I3L2K1 104 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 IGLV1-47P01700 117 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 PLP1P60201 277 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 C15orf32Q32M92 178 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 PVRIGQ6DKI7 326 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 VMO1Q7Z5L0 202 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 CSDC2Q9Y534 153 aaKnown RBP6.33□□□□□ -1.4
HPS4-205ENST00000429411 SOX21Q9Y651 276 aaPredicted RBP6.33□□□□□ -1.4
HPS4-205ENST00000429411 G3V318 75 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 H3BUT2 72 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 SCGB1A1P11684 91 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 ADORA2A-AS1P86434 159 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 WIPF2Q8TF74 440 aaPredicted RBP6.33□□□□□ -1.4
HPS4-205ENST00000429411 LINC00574Q9H8X3 128 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 ST20Q9HBF5 79 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 TRAV8-6A0A0B4J262 113 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 TMEM89A2RUT3 159 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 RS1O15537 224 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 IGHV3-11P01762 117 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 RPL24P83731 157 aaKnown RBP6.33□□□□□ -1.4
HPS4-205ENST00000429411 RHOGP84095 191 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 MTURNQ8N3F0 131 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 MLST8Q9BVC4 326 aa6.33□□□□□ -1.4
HPS4-205ENST00000429411 MRPS16Q9Y3D3 137 aaKnown RBP6.33□□□□□ -1.4
HPS4-205ENST00000429411 WNK1Q9H4A3 2382 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 A0A1B0GXF2 115 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 M0R381 172 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 MGPP08493 103 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 GATA1P15976 413 aaPredicted RBP6.32□□□□□ -1.4
HPS4-205ENST00000429411 FAM71F2Q6NXP2 309 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 URB1-AS1Q96HZ7 61 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 VKORC1Q9BQB6 163 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 TTTY13Q9BZ97 58 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 NACAE9PAV3 2078 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 C19orf71A6NCJ1 209 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 LEPP41159 167 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 DLX6P56179 175 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 KLF5Q13887 457 aaPredicted RBP6.32□□□□□ -1.4
HPS4-205ENST00000429411 TMEM78Q5T7P6 136 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 C16orf92Q96LL3 132 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 GTSF1LQ9H1H1 148 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 MAP1LC3AQ9H492 121 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 SIGLEC8Q9NYZ4 499 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 ZNF492Q9P255 531 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 KAAG1Q9UBP8 84 aa6.32□□□□□ -1.4
HPS4-205ENST00000429411 K7EMI3 77 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 SRD5A1P18405 259 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 PSG9Q00887 426 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 ITLN2Q8WWU7 325 aaPredicted RBP6.31□□□□□ -1.4
HPS4-205ENST00000429411 IFI27L1Q96BM0 104 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 FOXC2Q99958 501 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 KLF12Q9Y4X4 402 aa6.31□□□□□ -1.4
HPS4-205ENST00000429411 H3BRN7 92 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms