RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 PRTN3P24158 256 aa11.67□□□□□ -0.54
CACTIN-203ENST00000429344 MTORP42345 2549 aa11.67□□□□□ -0.54
CACTIN-203ENST00000429344 A0A096LNJ9 63 aa11.67□□□□□ -0.54
CACTIN-203ENST00000429344 C9orf118A6NHY6 69 aa11.67□□□□□ -0.54
CACTIN-203ENST00000429344 SCGB2A1O75556 95 aa11.66□□□□□ -0.54
CACTIN-203ENST00000429344 PRORYQ9H606 182 aa11.66□□□□□ -0.54
CACTIN-203ENST00000429344 H3BRN7 92 aa11.66□□□□□ -0.54
CACTIN-203ENST00000429344 ZNF80P51504 273 aaPredicted RBP11.66□□□□□ -0.54
CACTIN-203ENST00000429344 CCL19Q99731 98 aa11.66□□□□□ -0.54
CACTIN-203ENST00000429344 MAP1LC3AQ9H492 121 aa11.66□□□□□ -0.54
CACTIN-203ENST00000429344 JMJD1CQ15652 2540 aa11.66□□□□□ -0.54
CACTIN-203ENST00000429344 MFAP4P55083 255 aa11.66□□□□□ -0.54
CACTIN-203ENST00000429344 HSD52Q0P140 79 aa11.66□□□□□ -0.54
CACTIN-203ENST00000429344 IGKV3-7A0A075B6H7 116 aa11.65□□□□□ -0.54
CACTIN-203ENST00000429344 TRAV26-2A0A0B4J265 109 aa11.65□□□□□ -0.54
CACTIN-203ENST00000429344 C8orf31Q8N9H6 132 aa11.65□□□□□ -0.54
CACTIN-203ENST00000429344 C21orf62Q9NYP8 219 aa11.65□□□□□ -0.54
CACTIN-203ENST00000429344 PRB1P04280 392 aa11.65□□□□□ -0.55
CACTIN-203ENST00000429344 ZFP36P26651 326 aaKnown RBP11.65□□□□□ -0.55
CACTIN-203ENST00000429344 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.55
CACTIN-203ENST00000429344 SAMD5Q5TGI4 173 aa11.64□□□□□ -0.55
CACTIN-203ENST00000429344 TRAV26-1A0A087WT03 109 aa11.64□□□□□ -0.55
CACTIN-203ENST00000429344 IGKV2D-26A0A0A0MRZ7 120 aa11.64□□□□□ -0.55
CACTIN-203ENST00000429344 SMIM13P0DJ93 91 aa11.64□□□□□ -0.55
CACTIN-203ENST00000429344 FXYD2P54710 66 aa11.64□□□□□ -0.55
CACTIN-203ENST00000429344 ZC2HC1BQ5TFG8 222 aa11.64□□□□□ -0.55
CACTIN-203ENST00000429344 DCHS2Q6V1P9 2916 aa11.64□□□□□ -0.55
CACTIN-203ENST00000429344 NDUFA3O95167 84 aa11.64□□□□□ -0.55
CACTIN-203ENST00000429344 ARPC1AQ92747 370 aa11.64□□□□□ -0.55
CACTIN-203ENST00000429344 M0R1W7 72 aa11.63□□□□□ -0.55
CACTIN-203ENST00000429344 PVRIGQ6DKI7 326 aa11.63□□□□□ -0.55
CACTIN-203ENST00000429344 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
CACTIN-203ENST00000429344 TMEM158Q8WZ71 300 aa11.63□□□□□ -0.55
CACTIN-203ENST00000429344 PRR25Q96S07 402 aa11.63□□□□□ -0.55
CACTIN-203ENST00000429344 H3BRM9 83 aa11.63□□□□□ -0.55
CACTIN-203ENST00000429344 C5orf64Q2M2E5 130 aa11.63□□□□□ -0.55
CACTIN-203ENST00000429344 Q6AWC8 147 aa11.63□□□□□ -0.55
CACTIN-203ENST00000429344 TSSC4Q9Y5U2 329 aaPredicted RBP11.63□□□□□ -0.55
CACTIN-203ENST00000429344 BRD3OSQ6XYD6 125 aa11.62□□□□□ -0.55
CACTIN-203ENST00000429344 DOPEY1Q5JWR5 2465 aa11.62□□□□□ -0.55
CACTIN-203ENST00000429344 K7EP34 96 aa11.62□□□□□ -0.55
CACTIN-203ENST00000429344 FGF6P10767 208 aa11.62□□□□□ -0.55
CACTIN-203ENST00000429344 LGALS9BQ3B8N2 356 aa11.62□□□□□ -0.55
CACTIN-203ENST00000429344 LGALS9CQ6DKI2 356 aa11.62□□□□□ -0.55
CACTIN-203ENST00000429344 RPL7P18124 248 aaKnown RBP11.62□□□□□ -0.55
CACTIN-203ENST00000429344 LY6EQ16553 131 aa11.62□□□□□ -0.55
CACTIN-203ENST00000429344 TMEM219Q86XT9 240 aa11.62□□□□□ -0.55
CACTIN-203ENST00000429344 LINC00527Q9UJ94 153 aa11.62□□□□□ -0.55
CACTIN-203ENST00000429344 TRAV40A0A0B4J280 105 aa11.61□□□□□ -0.55
CACTIN-203ENST00000429344 PRAC2D3DTV9 90 aa11.61□□□□□ -0.55
CACTIN-203ENST00000429344 SAA4P35542 130 aa11.61□□□□□ -0.55
CACTIN-203ENST00000429344 AMTNQ6UX39 209 aa11.61□□□□□ -0.55
CACTIN-203ENST00000429344 BOD1L2Q8IYS8 172 aa11.61□□□□□ -0.55
CACTIN-203ENST00000429344 A0A1B0GW15 77 aa11.61□□□□□ -0.55
CACTIN-203ENST00000429344 A0A1W2PPM0 123 aa11.61□□□□□ -0.55
CACTIN-203ENST00000429344 DTX2Q86UW9 622 aa11.61□□□□□ -0.55
CACTIN-203ENST00000429344 C11orf71Q6IPW1 123 aa11.61□□□□□ -0.55
CACTIN-203ENST00000429344 TNFRSF6BO95407 300 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 CRYGBP07316 175 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 OR9G4Q8NGQ1 327 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 PIMREGQ9BSJ6 248 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 IL17RELQ6ZVW7 336 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 OR4X2Q8NGF9 303 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 CHAC1Q9BUX1 264 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 FLNCQ14315 2725 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 AGRNO00468 2067 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 NDPQ00604 133 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
CACTIN-203ENST00000429344 HIVEP2P31629 2446 aa11.59□□□□□ -0.55
CACTIN-203ENST00000429344 TEX48A0A1B0GUV7 120 aa11.59□□□□□ -0.55
CACTIN-203ENST00000429344 TMEM8BA6NDV4 472 aa11.59□□□□□ -0.55
CACTIN-203ENST00000429344 RPL11P62913 178 aaKnown RBP11.59□□□□□ -0.55
CACTIN-203ENST00000429344 ATP6V0BQ99437 205 aa11.59□□□□□ -0.55
CACTIN-203ENST00000429344 CRYBA4P53673 196 aa11.59□□□□□ -0.55
CACTIN-203ENST00000429344 DYNAPQ8N1N2 210 aa11.59□□□□□ -0.55
CACTIN-203ENST00000429344 NRGNQ92686 78 aa11.59□□□□□ -0.55
CACTIN-203ENST00000429344 HIST1H4GQ99525 98 aa11.59□□□□□ -0.55
CACTIN-203ENST00000429344 IGKCP01834 107 aa11.59□□□□□ -0.55
CACTIN-203ENST00000429344 OR11H6Q8NGC7 330 aa11.59□□□□□ -0.55
CACTIN-203ENST00000429344 FABP5P3A8MUU1 101 aa11.58□□□□□ -0.56
CACTIN-203ENST00000429344 TRGV3P03979 118 aa11.58□□□□□ -0.56
CACTIN-203ENST00000429344 ANXA2RQ3ZCQ2 193 aa11.58□□□□□ -0.56
CACTIN-203ENST00000429344 Q6ZQT7 251 aa11.58□□□□□ -0.56
CACTIN-203ENST00000429344 MYOZ3Q8TDC0 251 aa11.58□□□□□ -0.56
CACTIN-203ENST00000429344 LY6G5BQ8NDX9 201 aa11.58□□□□□ -0.56
CACTIN-203ENST00000429344 SVIPQ8NHG7 77 aa11.58□□□□□ -0.56
CACTIN-203ENST00000429344 RNF5Q99942 180 aa11.58□□□□□ -0.56
CACTIN-203ENST00000429344 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.56
CACTIN-203ENST00000429344 M0R381 172 aa11.57□□□□□ -0.56
CACTIN-203ENST00000429344 CLEC3BP05452 202 aa11.57□□□□□ -0.56
CACTIN-203ENST00000429344 LYPD1Q8N2G4 141 aa11.57□□□□□ -0.56
CACTIN-203ENST00000429344 GEMIN7Q9H840 131 aaKnown RBP11.57□□□□□ -0.56
CACTIN-203ENST00000429344 SS18L2Q9UHA2 77 aa11.57□□□□□ -0.56
CACTIN-203ENST00000429344 IGHV4-39P01824 125 aa11.57□□□□□ -0.56
CACTIN-203ENST00000429344 HOXB4P17483 251 aaPredicted RBP11.57□□□□□ -0.56
CACTIN-203ENST00000429344 CLEC19AQ6UXS0 136 aa11.57□□□□□ -0.56
CACTIN-203ENST00000429344 SMIM17P0DL12 118 aa11.56□□□□□ -0.56
CACTIN-203ENST00000429344 ADAMTSL5Q6ZMM2 481 aa11.56□□□□□ -0.56
CACTIN-203ENST00000429344 FANCD2OSQ96PS1 177 aa11.56□□□□□ -0.56
CACTIN-203ENST00000429344 CFAP46Q8IYW2 2715 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms