RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 DCANP1Q8TF63 244 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 C16orf92Q96LL3 132 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 NAGKQ9UJ70 344 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 KIR2DL5BA0A0G2JN68 375 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 KIR2DL5BA0A0G2JPC4 375 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 A0A1B0GV90 55 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 SCGB2A1O75556 95 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 HIST1H1EP10412 219 aaKnown RBP7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 CRISP2P16562 243 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 FXYD7P58549 80 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 COX19Q49B96 90 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 PSMG4Q5JS54 123 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 PRR31Q5SQ13 230 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 C1orf194Q5T5A4 169 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 KIR2DL5AQ8N109 375 aa7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 PRKDCP78527 4128 aaKnown RBP7.12□□□□□ -1.27
HMGCLL1-206ENST00000428842 KNCNA6PVL3 124 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 SCGB1D1O95968 90 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 MT-ND6P03923 174 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 FRMD6-AS1P0C7T7 363 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 RPL7P18124 248 aaKnown RBP7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 TAS2R60P59551 318 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 NRN1Q9NPD7 142 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 ZNF331Q9NQX6 463 aaPredicted RBP7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 SMIM27A0A1W2PRY6 76 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 SNURFLB1AK76 121 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 G3V4G9 280 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 LGALS9O00182 355 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 SERF1AO75920 110 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 SSTP61278 116 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 WDR73Q6P4I2 378 aa7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 RNASE7Q9H1E1 156 aaKnown RBP7.11□□□□□ -1.27
HMGCLL1-206ENST00000428842 CSMD3Q7Z407 3707 aa7.1□□□□□ -1.27
HMGCLL1-206ENST00000428842 SOCS3O14543 225 aa7.1□□□□□ -1.27
HMGCLL1-206ENST00000428842 MYCNOSP40205 109 aa7.1□□□□□ -1.27
HMGCLL1-206ENST00000428842 RPL19P84098 196 aaKnown RBP7.1□□□□□ -1.27
HMGCLL1-206ENST00000428842 TMEM136Q6ZRR5 245 aa7.1□□□□□ -1.27
HMGCLL1-206ENST00000428842 RBPMS2Q6ZRY4 209 aaKnown RBP7.1□□□□□ -1.27
HMGCLL1-206ENST00000428842 Q6ZWC4 215 aa7.1□□□□□ -1.27
HMGCLL1-206ENST00000428842 ZNF747Q9BV97 191 aa7.1□□□□□ -1.27
HMGCLL1-206ENST00000428842 IBA57Q5T440 356 aaKnown RBP7.1□□□□□ -1.27
HMGCLL1-206ENST00000428842 C8orf49Q96NF6 230 aa7.1□□□□□ -1.27
HMGCLL1-206ENST00000428842 TENM2Q9NT68 2774 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 K7EMT4 169 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 DEFB131AP59861 70 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 OR10J3Q5JRS4 329 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 LCN12Q6JVE5 192 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 TEX43Q6ZNM6 134 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 FAM231DQ6ZW35 169 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 ZNF738Q8NE65 137 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 PRR25Q96S07 402 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 TMEM14CQ9P0S9 112 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 PEMTQ9UBM1 199 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 F2Z2F3 143 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 SPRY2O43597 315 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 PRR27Q6MZM9 219 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 PRNTQ86SH4 94 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 ATP6V0BQ99437 205 aa7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 ZNF256Q9Y2P7 627 aaPredicted RBP7.09□□□□□ -1.27
HMGCLL1-206ENST00000428842 TRAV12-2A0A075B6T6 113 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 ODF3L2Q3SX64 289 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 LINC00322Q6ZN03 302 aaPredicted RBP7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 BAGE3Q86Y29 109 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 BAGE2Q86Y30 109 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 TMEM75Q8N9X5 138 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 OR4B1Q8NGF8 309 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 EPDR1Q9UM22 224 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 A0A1W2PS18 150 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 M0R2Z0 102 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 PEX7O00628 323 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 EREGO14944 169 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 IGLV2-11P01706 119 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 HLA-DQA1P01909 254 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 TCRAP04437 139 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 KRTAP10-11P60412 298 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 HIST1H1AQ02539 215 aaPredicted RBP7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 C20orf144Q9BQM9 153 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 CLEC5AQ9NY25 188 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 NAT8BQ9UHF3 227 aa7.08□□□□□ -1.28
HMGCLL1-206ENST00000428842 K7EQG2 157 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 CA1P00915 261 aaPredicted RBP7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 IGLV1-51P01701 117 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 GPX1P07203 203 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 MGST1P10620 155 aaKnown RBP7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 PRR9Q5T870 116 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 RASL11AQ6T310 242 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 DEFB125Q8N687 156 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 GRAMD2BQ96HH9 432 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 DIRC3C9JPN6 131 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 M0QZ24 198 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 SNHG12Q9BXW3 62 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 AGPAT4-IT1Q9H0P7 198 aa7.07□□□□□ -1.28
HMGCLL1-206ENST00000428842 SPINK4O60575 86 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 RAB4AP20338 218 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 ZNF80P51504 273 aaPredicted RBP7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 TCL1AP56279 114 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 NUTF2P61970 127 aaKnown RBP7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 SHISA2Q6UWI4 295 aa7.06□□□□□ -1.28
HMGCLL1-206ENST00000428842 MRPL52Q86TS9 123 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms