RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 HLA-DRB4X5D2U9 266 aa6.78□□□□□ -1.32
NR1I3-209ENST00000428574 CUBNO60494 3623 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 TRAV21A0A0B4J279 112 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 A0A1W2PPQ1 181 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 KLLNB2CW77 178 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 SAP30O75446 220 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 AMBPP02760 352 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 MT-ND6P03923 174 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 ERCC8Q13216 396 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 KRTAP24-1Q3LI83 254 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 C9orf66Q5T8R8 295 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 ZFAND2AQ8N6M9 145 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 WFDC9Q8NEX5 89 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 FAM210BQ96KR6 192 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 SGK494Q96LW2 274 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 SRD5A3Q9H8P0 318 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 NF1P21359 2839 aa6.77□□□□□ -1.33
NR1I3-209ENST00000428574 IGKV3-7A0A075B6H7 116 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 IZUMO1RA6ND01 250 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 SH2D1AO60880 128 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 S100A8P05109 93 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 CTAG1AP78358 180 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 BEAN1Q3B7T3 259 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 WDR73Q6P4I2 378 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 LINC00322Q6ZN03 302 aaPredicted RBP6.76□□□□□ -1.33
NR1I3-209ENST00000428574 OR2D3Q8NGH3 330 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 Q8TAT8 98 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 C8orf49Q96NF6 230 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 C20orf144Q9BQM9 153 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 MAP6D1Q9H9H5 199 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 URGCP-MRPS24S4R325 110 aa6.76□□□□□ -1.33
NR1I3-209ENST00000428574 TMEM189A5PLL7 270 aa6.75□□□□□ -1.33
NR1I3-209ENST00000428574 LCE2BO14633 110 aa6.75□□□□□ -1.33
NR1I3-209ENST00000428574 MED14OSP0DP75 135 aa6.75□□□□□ -1.33
NR1I3-209ENST00000428574 TFPI2P48307 235 aa6.75□□□□□ -1.33
NR1I3-209ENST00000428574 CRIP1P50238 77 aa6.75□□□□□ -1.33
NR1I3-209ENST00000428574 DNLZQ5SXM8 178 aa6.75□□□□□ -1.33
NR1I3-209ENST00000428574 WFDC3Q8IUB2 231 aa6.75□□□□□ -1.33
NR1I3-209ENST00000428574 NEU1Q99519 415 aa6.75□□□□□ -1.33
NR1I3-209ENST00000428574 GNB1LQ9BYB4 327 aa6.75□□□□□ -1.33
NR1I3-209ENST00000428574 CNFNQ9BYD5 112 aa6.75□□□□□ -1.33
NR1I3-209ENST00000428574 TGIF2-C20orf24A0A0A6YYL0 155 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 HIGD1CA8MV81 97 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 C1orf196B1AJZ1 125 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 OR11H12B2RN74 326 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 F2Z2F3 143 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 H3BMM0 161 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 GPX1P07203 203 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 CTRLP40313 264 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 CDKN1BP46527 198 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 SMCPP49901 116 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-209ENST00000428574 ZNF80P51504 273 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-209ENST00000428574 DEFB131AP59861 70 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 ODF3L2Q3SX64 289 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 TDRG1Q3Y452 100 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 AMTNQ6UX39 209 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 PRIMA1Q86XR5 153 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 KCNS1Q96KK3 526 aa6.74□□□□□ -1.33
NR1I3-209ENST00000428574 A0A1B0GXF2 115 aa6.73□□□□□ -1.33
NR1I3-209ENST00000428574 C7orf71A4D174 169 aa6.73□□□□□ -1.33
NR1I3-209ENST00000428574 HLA-DQA1P01909 254 aa6.73□□□□□ -1.33
NR1I3-209ENST00000428574 IGLC6P0CF74 106 aa6.73□□□□□ -1.33
NR1I3-209ENST00000428574 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
NR1I3-209ENST00000428574 RAB5BP61020 215 aa6.73□□□□□ -1.33
NR1I3-209ENST00000428574 NUTF2P61970 127 aaKnown RBP6.73□□□□□ -1.33
NR1I3-209ENST00000428574 HBBP68871 147 aa6.73□□□□□ -1.33
NR1I3-209ENST00000428574 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.73□□□□□ -1.33
NR1I3-209ENST00000428574 GATD1Q8NB37 220 aa6.73□□□□□ -1.33
NR1I3-209ENST00000428574 NUP35Q8NFH5 326 aa6.73□□□□□ -1.33
NR1I3-209ENST00000428574 BORCS7Q96B45 105 aa6.73□□□□□ -1.33
NR1I3-209ENST00000428574 LINC00467Q9BRT7 94 aa6.73□□□□□ -1.33
NR1I3-209ENST00000428574 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
NR1I3-209ENST00000428574 F6UB75 175 aa6.72□□□□□ -1.33
NR1I3-209ENST00000428574 OR5AL1P0C617 328 aa6.72□□□□□ -1.33
NR1I3-209ENST00000428574 RIGQ13278 110 aa6.72□□□□□ -1.33
NR1I3-209ENST00000428574 C12orf54Q6X4T0 127 aa6.72□□□□□ -1.33
NR1I3-209ENST00000428574 C3orf56Q8N813 242 aa6.72□□□□□ -1.33
NR1I3-209ENST00000428574 GTSF1Q8WW33 167 aa6.72□□□□□ -1.33
NR1I3-209ENST00000428574 IGHV4-4A0A075B6R2 117 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 SNAI2O43623 268 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 ZNF324O75467 553 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-209ENST00000428574 CA1P00915 261 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-209ENST00000428574 ORM1P02763 201 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 ZNF705DP0CH99 300 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-209ENST00000428574 ZNF705BP0CI00 300 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-209ENST00000428574 CD33P20138 364 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 ACTL10Q5JWF8 245 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 GDF5OSQ5U4N7 250 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 MORN3Q6PF18 240 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-209ENST00000428574 TRPT1Q86TN4 253 aaKnown RBP6.71□□□□□ -1.34
NR1I3-209ENST00000428574 GTSCR1Q86UQ5 136 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 STHQ8IWL8 128 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 TMEM256Q8N2U0 113 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 FER1L6-AS1Q8NA97 138 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 SVIPQ8NHG7 77 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 SSBP4Q9BWG4 385 aaPredicted RBP6.71□□□□□ -1.34
NR1I3-209ENST00000428574 C19orf73Q9NVV2 129 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 TP53TG3Q9ULZ0 132 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 MAST4O15021 2626 aa6.71□□□□□ -1.34
NR1I3-209ENST00000428574 IGKV3D-20A0A0C4DH25 116 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms