RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 NDUFAF3Q9BU61 184 aa10.45□□□□□ -0.74
SPG11-202ENST00000427534 U3KQE9 123 aa10.45□□□□□ -0.74
SPG11-202ENST00000427534 SHISA9B4DS77 424 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 hADV29S1A0JD25 119 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 LY6G5BQ8NDX9 201 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 C1orf147Q96MC9 270 aaPredicted RBP10.44□□□□□ -0.74
SPG11-202ENST00000427534 LY96Q9Y6Y9 160 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 TINCRA0A1B0GVN0 87 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 GP9P14770 177 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 NBL1P41271 181 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 WNK2Q9Y3S1 2297 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 KMT2EQ8IZD2 1858 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 C9JAW5 83 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 I3L3M4 83 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 NACAE9PAV3 2078 aa10.44□□□□□ -0.74
SPG11-202ENST00000427534 FOXE3Q13461 319 aa10.43□□□□□ -0.74
SPG11-202ENST00000427534 AMBPP02760 352 aa10.43□□□□□ -0.74
SPG11-202ENST00000427534 LMO1P25800 156 aa10.43□□□□□ -0.74
SPG11-202ENST00000427534 LRCOL1A6NCL2 159 aa10.43□□□□□ -0.74
SPG11-202ENST00000427534 KIF26AQ9ULI4 1882 aaPredicted RBP10.43□□□□□ -0.74
SPG11-202ENST00000427534 DEFB1P60022 68 aa10.43□□□□□ -0.74
SPG11-202ENST00000427534 ZNF833PQ6ZTB9 187 aa10.43□□□□□ -0.74
SPG11-202ENST00000427534 ROS1P08922 2347 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 GHRHP01286 108 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 MYLKQ15746 1914 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 IGHV2-5P01817 119 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 VPREB3Q9UKI3 123 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 PKDREJQ9NTG1 2253 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 IGFL3Q6UXB1 125 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 Q8TCH9 128 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 CLPSL1A2RUU4 121 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
SPG11-202ENST00000427534 IGLL5B9A064 214 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 FNDC10F2Z333 226 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 CRYGCP07315 174 aa10.42□□□□□ -0.74
SPG11-202ENST00000427534 PFN1P07737 140 aaKnown RBP10.42□□□□□ -0.74
SPG11-202ENST00000427534 NDUFA4L2Q9NRX3 87 aa10.41□□□□□ -0.74
SPG11-202ENST00000427534 C5orf38Q86SI9 138 aa10.41□□□□□ -0.74
SPG11-202ENST00000427534 CTSZQ9UBR2 303 aa10.41□□□□□ -0.74
SPG11-202ENST00000427534 SDHAF1A6NFY7 115 aa10.41□□□□□ -0.74
SPG11-202ENST00000427534 LYPD1Q8N2G4 141 aa10.41□□□□□ -0.74
SPG11-202ENST00000427534 IGHV7-4-1A0A0J9YVY3 117 aa10.41□□□□□ -0.74
SPG11-202ENST00000427534 C3orf79P0CE67 100 aa10.4□□□□□ -0.74
SPG11-202ENST00000427534 DEFB135Q30KP9 77 aa10.4□□□□□ -0.74
SPG11-202ENST00000427534 WT1-ASQ06250 92 aa10.4□□□□□ -0.74
SPG11-202ENST00000427534 K7EMI3 77 aa10.4□□□□□ -0.74
SPG11-202ENST00000427534 WISP2O76076 250 aa10.4□□□□□ -0.75
SPG11-202ENST00000427534 ADCYAP1P18509 176 aa10.4□□□□□ -0.75
SPG11-202ENST00000427534 HAMPP81172 84 aa10.4□□□□□ -0.75
SPG11-202ENST00000427534 RBMY1FQ15415 496 aaKnown RBP10.4□□□□□ -0.75
SPG11-202ENST00000427534 MPV17L2Q567V2 206 aa10.4□□□□□ -0.75
SPG11-202ENST00000427534 HSD52Q0P140 79 aa10.4□□□□□ -0.75
SPG11-202ENST00000427534 NPBQ8NG41 125 aa10.4□□□□□ -0.75
SPG11-202ENST00000427534 SRSF8Q9BRL6 282 aaKnown RBP10.4□□□□□ -0.75
SPG11-202ENST00000427534 DOCK11Q5JSL3 2073 aa10.39□□□□□ -0.75
SPG11-202ENST00000427534 CRLF1O75462 422 aa10.39□□□□□ -0.75
SPG11-202ENST00000427534 VOPP1Q96AW1 172 aa10.39□□□□□ -0.75
SPG11-202ENST00000427534 NDUFA4O00483 81 aa10.39□□□□□ -0.75
SPG11-202ENST00000427534 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.39□□□□□ -0.75
SPG11-202ENST00000427534 GYPEP15421 78 aa10.39□□□□□ -0.75
SPG11-202ENST00000427534 RSPO1Q2MKA7 263 aaPredicted RBP10.39□□□□□ -0.75
SPG11-202ENST00000427534 C2orf66Q6UXQ4 117 aa10.39□□□□□ -0.75
SPG11-202ENST00000427534 SYS1-DBNDD2H3BUS1 97 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 BUB3O43684 328 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 ADORA2A-AS1P86434 159 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 MRPL51Q4U2R6 128 aaKnown RBP10.38□□□□□ -0.75
SPG11-202ENST00000427534 TMEM14BQ9NUH8 114 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 SMPXQ9UHP9 88 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 KIR3DS1Q14943 382 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 ZC2HC1AQ96GY0 325 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 GPR179Q6PRD1 2367 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 J3QLI3 93 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 PIP4P1Q86T03 277 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 GAGE2BQ13066 116 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 TRBV19A0A075B6N1 114 aa10.38□□□□□ -0.75
SPG11-202ENST00000427534 IGHV4OR15-8A0A075B7B6 117 aa10.37□□□□□ -0.75
SPG11-202ENST00000427534 A0A087WW49 117 aa10.37□□□□□ -0.75
SPG11-202ENST00000427534 LINC01549A6NIU2 74 aa10.37□□□□□ -0.75
SPG11-202ENST00000427534 CFHR4Q92496 578 aa10.37□□□□□ -0.75
SPG11-202ENST00000427534 NCOR1P1Q9H4R4 102 aa10.37□□□□□ -0.75
SPG11-202ENST00000427534 DYNAPQ8N1N2 210 aa10.37□□□□□ -0.75
SPG11-202ENST00000427534 CENPVL3A0A0U1RRI6 287 aa10.36□□□□□ -0.75
SPG11-202ENST00000427534 C9orf66Q5T8R8 295 aa10.36□□□□□ -0.75
SPG11-202ENST00000427534 LINC01559Q495D7 138 aa10.36□□□□□ -0.75
SPG11-202ENST00000427534 FAM110AQ9BQ89 295 aa10.36□□□□□ -0.75
SPG11-202ENST00000427534 CD5LO43866 347 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 IGLV1-44P01699 117 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 SEC11AP67812 179 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 GTSF1LQ9H1H1 148 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 C9JQL5 133 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 GATA1P15976 413 aaPredicted RBP10.35□□□□□ -0.75
SPG11-202ENST00000427534 SMIM2Q9BVW6 85 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 ADAMTSL5Q6ZMM2 481 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 H3BRN7 92 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 NCR3O14931 201 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 PRR25Q96S07 402 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 K7ERJ3 54 aa10.35□□□□□ -0.75
SPG11-202ENST00000427534 INAFM1C9JVW0 142 aa10.34□□□□□ -0.75
SPG11-202ENST00000427534 RMI2Q96E14 147 aa10.34□□□□□ -0.75
SPG11-202ENST00000427534 MRPL27Q9P0M9 148 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms