RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 SMIM20Q8N5G0 67 aa10.04□□□□□ -0.8
HDLBP-214ENST00000427183 PNRC2Q9NPJ4 139 aaKnown RBP10.04□□□□□ -0.8
HDLBP-214ENST00000427183 TRIOBPQ9H2D6 2365 aa10.04□□□□□ -0.8
HDLBP-214ENST00000427183 A0A0J9YY99 117 aa10.04□□□□□ -0.8
HDLBP-214ENST00000427183 C8orf86Q6ZUL3 223 aa10.04□□□□□ -0.8
HDLBP-214ENST00000427183 LINC01619G3V211 115 aa10.04□□□□□ -0.8
HDLBP-214ENST00000427183 TMEM190Q8WZ59 177 aa10.04□□□□□ -0.8
HDLBP-214ENST00000427183 ABCA7Q8IZY2 2146 aa10.04□□□□□ -0.8
HDLBP-214ENST00000427183 PDE6HQ13956 83 aa10.04□□□□□ -0.8
HDLBP-214ENST00000427183 C14orf132Q9NPU4 83 aa10.04□□□□□ -0.8
HDLBP-214ENST00000427183 ZNF492Q9P255 531 aa10.04□□□□□ -0.8
HDLBP-214ENST00000427183 IGKV2D-24A0A075B6R9 120 aa10.03□□□□□ -0.8
HDLBP-214ENST00000427183 IGKV3D-7A0A0C4DH55 119 aa10.03□□□□□ -0.8
HDLBP-214ENST00000427183 C12orf74Q32Q52 190 aa10.03□□□□□ -0.8
HDLBP-214ENST00000427183 Q9HAA7 133 aa10.03□□□□□ -0.8
HDLBP-214ENST00000427183 Q6ZQT7 251 aa10.03□□□□□ -0.8
HDLBP-214ENST00000427183 IGLV2-23P01705 113 aa10.03□□□□□ -0.8
HDLBP-214ENST00000427183 HLA-DMBP28068 263 aa10.03□□□□□ -0.8
HDLBP-214ENST00000427183 NTN3O00634 580 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-214ENST00000427183 MST1LQ2TV78 715 aa10.03□□□□□ -0.8
HDLBP-214ENST00000427183 LINC01356Q8N9X3 169 aa10.03□□□□□ -0.8
HDLBP-214ENST00000427183 LGALS9BQ3B8N2 356 aa10.02□□□□□ -0.8
HDLBP-214ENST00000427183 LGALS9CQ6DKI2 356 aa10.02□□□□□ -0.8
HDLBP-214ENST00000427183 FLVCR1-AS1Q8TAF5 88 aa10.02□□□□□ -0.8
HDLBP-214ENST00000427183 ABCA4P78363 2273 aa10.02□□□□□ -0.81
HDLBP-214ENST00000427183 TRBV19A0A075B6N1 114 aa10.02□□□□□ -0.81
HDLBP-214ENST00000427183 C8orf31Q8N9H6 132 aa10.02□□□□□ -0.81
HDLBP-214ENST00000427183 WIPF2Q8TF74 440 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-214ENST00000427183 DOCK6Q96HP0 2047 aa10.02□□□□□ -0.81
HDLBP-214ENST00000427183 PLXNB3Q9ULL4 1909 aa10.02□□□□□ -0.81
HDLBP-214ENST00000427183 SPRY2O43597 315 aa10.02□□□□□ -0.81
HDLBP-214ENST00000427183 TIMM17AQ99595 171 aa10.02□□□□□ -0.81
HDLBP-214ENST00000427183 ORMDL1Q9P0S3 153 aa10.02□□□□□ -0.81
HDLBP-214ENST00000427183 ZNF106Q9H2Y7 1883 aaKnown RBP10.02□□□□□ -0.81
HDLBP-214ENST00000427183 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-214ENST00000427183 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-214ENST00000427183 SH2D6Q7Z4S9 175 aa10.01□□□□□ -0.81
HDLBP-214ENST00000427183 F8VRH5 84 aa10.01□□□□□ -0.81
HDLBP-214ENST00000427183 RPL18AQ02543 176 aaKnown RBP10.01□□□□□ -0.81
HDLBP-214ENST00000427183 CDKN1BP46527 198 aa10.01□□□□□ -0.81
HDLBP-214ENST00000427183 COL4A6Q14031 1691 aa10.01□□□□□ -0.81
HDLBP-214ENST00000427183 HERVK_113P63121 156 aa10.01□□□□□ -0.81
HDLBP-214ENST00000427183 V9GYV3 84 aa10.01□□□□□ -0.81
HDLBP-214ENST00000427183 K7EMI3 77 aa10□□□□□ -0.81
HDLBP-214ENST00000427183 NDUFS7O75251 213 aa10□□□□□ -0.81
HDLBP-214ENST00000427183 SPATA25Q9BR10 227 aa10□□□□□ -0.81
HDLBP-214ENST00000427183 ZC2HC1AQ96GY0 325 aa10□□□□□ -0.81
HDLBP-214ENST00000427183 PRR25Q96S07 402 aa10□□□□□ -0.81
HDLBP-214ENST00000427183 QRFPP83859 136 aa10□□□□□ -0.81
HDLBP-214ENST00000427183 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
HDLBP-214ENST00000427183 Q9H8V8 135 aa10□□□□□ -0.81
HDLBP-214ENST00000427183 NDUFC2O95298 119 aa10□□□□□ -0.81
HDLBP-214ENST00000427183 ZFP36L1Q07352 338 aaKnown RBP10□□□□□ -0.81
HDLBP-214ENST00000427183 Q0VFX4 171 aa10□□□□□ -0.81
HDLBP-214ENST00000427183 WDR86Q86TI4 376 aa10□□□□□ -0.81
HDLBP-214ENST00000427183 IGHV2-70P01814 119 aa9.99□□□□□ -0.81
HDLBP-214ENST00000427183 LYL1P12980 280 aa9.99□□□□□ -0.81
HDLBP-214ENST00000427183 F6UB75 175 aa9.99□□□□□ -0.81
HDLBP-214ENST00000427183 CFC1BP0CG36 223 aa9.99□□□□□ -0.81
HDLBP-214ENST00000427183 CFC1P0CG37 223 aa9.99□□□□□ -0.81
HDLBP-214ENST00000427183 HELZP42694 1942 aaKnown RBP9.99□□□□□ -0.81
HDLBP-214ENST00000427183 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
HDLBP-214ENST00000427183 ZNF726P1Q15940 193 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 TRBV6-6A0A0A6YYG2 114 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 FNDC10F2Z333 226 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 DKK4Q9UBT3 224 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 A0A1B0GX51 115 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 E7EQL1 145 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 MED12Q93074 2177 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-214ENST00000427183 PCP2Q8IVA1 136 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 TRAV4A0A0B4J268 109 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 GNRH2O43555 120 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 SPANXDQ9BXN6 97 aa9.98□□□□□ -0.81
HDLBP-214ENST00000427183 NOP10Q9NPE3 64 aaKnown RBP9.98□□□□□ -0.81
HDLBP-214ENST00000427183 BUB3O43684 328 aa9.97□□□□□ -0.81
HDLBP-214ENST00000427183 COX7B2Q8TF08 81 aa9.97□□□□□ -0.81
HDLBP-214ENST00000427183 RMI2Q96E14 147 aa9.97□□□□□ -0.81
HDLBP-214ENST00000427183 CACNA1GO43497 2377 aa9.97□□□□□ -0.81
HDLBP-214ENST00000427183 DUX4L9Q6RFH8 374 aaPredicted RBP9.97□□□□□ -0.81
HDLBP-214ENST00000427183 IGKV1-6A0A0C4DH72 117 aa9.97□□□□□ -0.81
HDLBP-214ENST00000427183 TPSG1Q9NRR2 321 aa9.97□□□□□ -0.81
HDLBP-214ENST00000427183 DOCK7Q96N67 2140 aa9.97□□□□□ -0.81
HDLBP-214ENST00000427183 NDUFA4L2Q9NRX3 87 aa9.97□□□□□ -0.81
HDLBP-214ENST00000427183 TMEM14BQ9NUH8 114 aa9.97□□□□□ -0.81
HDLBP-214ENST00000427183 SPTBN2O15020 2390 aa9.97□□□□□ -0.81
HDLBP-214ENST00000427183 ETDCA0A1B0GVM5 59 aa9.96□□□□□ -0.81
HDLBP-214ENST00000427183 YPEL3P61236 119 aaPredicted RBP9.96□□□□□ -0.81
HDLBP-214ENST00000427183 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.81
HDLBP-214ENST00000427183 IGLC7A0M8Q6 106 aa9.96□□□□□ -0.81
HDLBP-214ENST00000427183 IGLV3-19P01714 112 aa9.96□□□□□ -0.81
HDLBP-214ENST00000427183 MSMBP08118 114 aa9.96□□□□□ -0.81
HDLBP-214ENST00000427183 APOC4P55056 127 aa9.96□□□□□ -0.81
HDLBP-214ENST00000427183 FUSP35637 526 aaKnown RBP eCLIP9.96□□□□□ -0.821e-7■■□□□ 12.7
HDLBP-214ENST00000427183 UBE2E1P51965 193 aa9.96□□□□□ -0.82
HDLBP-214ENST00000427183 DYNAPQ8N1N2 210 aa9.96□□□□□ -0.82
HDLBP-214ENST00000427183 TCF20Q9UGU0 1960 aaKnown RBP9.96□□□□□ -0.82
HDLBP-214ENST00000427183 CD59P13987 128 aa9.95□□□□□ -0.82
HDLBP-214ENST00000427183 PSMB8P28062 276 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms