RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 LGALS9CQ6DKI2 356 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 Q9H3A6 140 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 SIGLEC8Q9NYZ4 499 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 KAAG1Q9UBP8 84 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 COL12A1Q99715 3063 aa12.63□□□□□ -0.39
PKP4-205ENST00000426248 FLNCQ14315 2725 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 H7C2G1 150 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 VMO1Q7Z5L0 202 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 ZFHX4Q86UP3 3567 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 TRBV25-1A0A075B6N4 114 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 FOXI1Q12951 378 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 CEND1Q8N111 149 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 SIVA1O15304 175 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 LEPP41159 167 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 RPL27AP46776 148 aaKnown RBP12.62□□□□□ -0.39
PKP4-205ENST00000426248 LY6EQ16553 131 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
PKP4-205ENST00000426248 ACANP16112 2415 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 IGHV4-39P01824 125 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 Q6ZUT4 128 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 C1orf159Q96HA4 380 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 PRRC2AP48634 2157 aaKnown RBP12.61□□□□□ -0.39
PKP4-205ENST00000426248 FLNBO75369 2602 aaKnown RBP12.61□□□□□ -0.39
PKP4-205ENST00000426248 TMEM189A5PLL7 270 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 IGKCP01834 107 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 SSBP2P81877 361 aaPredicted RBP12.61□□□□□ -0.39
PKP4-205ENST00000426248 BRD3OSQ6XYD6 125 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 DTX2Q86UW9 622 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 KLK15Q9H2R5 256 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 ERG28Q9UKR5 140 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 HCFC1P51610 2035 aa12.61□□□□□ -0.39
PKP4-205ENST00000426248 TMEM213A2RRL7 107 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 FNDC10F2Z333 226 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 S100A4P26447 101 aaKnown RBP12.6□□□□□ -0.39
PKP4-205ENST00000426248 XGP55808 180 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 EXOC3-AS1Q8N2X6 119 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 OR11H12B2RN74 326 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 EVI2AP22794 236 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 OR11H1Q8NG94 326 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 OR11H2Q8NH07 326 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 TRAV40A0A0B4J280 105 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 CD69Q07108 199 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 NPIPB5A8MRT5 1133 aa12.6□□□□□ -0.39
PKP4-205ENST00000426248 HOXA3O43365 443 aaPredicted RBP12.6□□□□□ -0.39
PKP4-205ENST00000426248 IGKV2D-26A0A0A0MRZ7 120 aa12.59□□□□□ -0.39
PKP4-205ENST00000426248 RASL11BQ9BPW5 248 aa12.59□□□□□ -0.39
PKP4-205ENST00000426248 HECTD1Q9ULT8 2610 aa12.59□□□□□ -0.39
PKP4-205ENST00000426248 ORM1P02763 201 aa12.59□□□□□ -0.39
PKP4-205ENST00000426248 HIST2H2BCQ6DN03 193 aa12.59□□□□□ -0.39
PKP4-205ENST00000426248 BUB1B-PAK6H3BSN5 160 aa12.59□□□□□ -0.39
PKP4-205ENST00000426248 ZNF502Q8TBZ5 544 aa12.59□□□□□ -0.39
PKP4-205ENST00000426248 CACNG8Q8WXS5 425 aa12.59□□□□□ -0.39
PKP4-205ENST00000426248 DPF1Q92782 380 aa12.59□□□□□ -0.39
PKP4-205ENST00000426248 CFAP46Q8IYW2 2715 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 TCRAP04437 139 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 DLX4Q92988 240 aaPredicted RBP12.58□□□□□ -0.4
PKP4-205ENST00000426248 CHD6Q8TD26 2715 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 IGHV1-3A0A0C4DH29 117 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 GAGE12JA6NER3 117 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 PRSS46E5RG02 174 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 GAGE7O76087 117 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 GAGE12FP0CL80 117 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 GAGE12GP0CL81 117 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 GAGE12IP0CL82 117 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 GAGE4Q13068 117 aa12.58□□□□□ -0.4
PKP4-205ENST00000426248 KLF17Q5JT82 389 aaPredicted RBP12.58□□□□□ -0.4
PKP4-205ENST00000426248 LINC00527Q9UJ94 153 aa12.57□□□□□ -0.4
PKP4-205ENST00000426248 ANKRD17O75179 2603 aaKnown RBP12.57□□□□□ -0.4
PKP4-205ENST00000426248 RELNP78509 3460 aa12.57□□□□□ -0.4
PKP4-205ENST00000426248 MAP1LC3AQ9H492 121 aa12.57□□□□□ -0.4
PKP4-205ENST00000426248 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
PKP4-205ENST00000426248 UPK2O00526 184 aa12.57□□□□□ -0.4
PKP4-205ENST00000426248 PROP1O75360 226 aa12.57□□□□□ -0.4
PKP4-205ENST00000426248 FAM167A-AS1Q96KT0 104 aa12.57□□□□□ -0.4
PKP4-205ENST00000426248 F5H697 171 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 DPM2O94777 84 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 IGKV3-20P01619 116 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 Q1RN00 199 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 IGHV4-61A0A0C4DH41 118 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 TMEM95Q3KNT9 176 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 MYOZ3Q8TDC0 251 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 RRN3P1Q2M238 152 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 IGHV4-30-2A0A087WSY4 118 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 RPL32P62910 135 aaKnown RBP12.56□□□□□ -0.4
PKP4-205ENST00000426248 LYZL1Q6UWQ5 148 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 DDB2Q92466 427 aa12.56□□□□□ -0.4
PKP4-205ENST00000426248 E9PLD3 99 aa12.55□□□□□ -0.4
PKP4-205ENST00000426248 CNTFRP26992 372 aa12.55□□□□□ -0.4
PKP4-205ENST00000426248 FXYD5Q96DB9 178 aa12.55□□□□□ -0.4
PKP4-205ENST00000426248 LINC01549A6NIU2 74 aa12.55□□□□□ -0.4
PKP4-205ENST00000426248 HAX1O00165 279 aa12.55□□□□□ -0.4
PKP4-205ENST00000426248 PRCDQ00LT1 54 aa12.55□□□□□ -0.4
PKP4-205ENST00000426248 KIR2DL4Q99706 377 aa12.55□□□□□ -0.4
PKP4-205ENST00000426248 FOXA2Q9Y261 457 aaPredicted RBP12.55□□□□□ -0.4
PKP4-205ENST00000426248 SRRM4A7MD48 611 aaKnown RBP12.55□□□□□ -0.4
PKP4-205ENST00000426248 A8MWV9 139 aa12.55□□□□□ -0.4
PKP4-205ENST00000426248 ZFP36P26651 326 aaKnown RBP12.55□□□□□ -0.4
PKP4-205ENST00000426248 A6NJY4 79 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms