RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SCXQ7RTU7 201 aa11.06□□□□□ -0.64
CHCHD3-202ENST00000423635 TM2D2Q9BX73 214 aa11.06□□□□□ -0.64
CHCHD3-202ENST00000423635 SLIRPQ9GZT3 109 aaKnown RBP11.06□□□□□ -0.64
CHCHD3-202ENST00000423635 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
CHCHD3-202ENST00000423635 PKHD1L1Q86WI1 4243 aa11.05□□□□□ -0.64
CHCHD3-202ENST00000423635 TRAV8-6A0A0B4J262 113 aa11.05□□□□□ -0.64
CHCHD3-202ENST00000423635 PPT1P50897 306 aa11.05□□□□□ -0.64
CHCHD3-202ENST00000423635 ZNF138P52744 262 aa11.05□□□□□ -0.64
CHCHD3-202ENST00000423635 LAGE3Q14657 143 aa11.05□□□□□ -0.64
CHCHD3-202ENST00000423635 IAH1Q2TAA2 248 aaPredicted RBP11.05□□□□□ -0.64
CHCHD3-202ENST00000423635 SLC39A9Q9NUM3 307 aa11.05□□□□□ -0.64
CHCHD3-202ENST00000423635 WDR83OSQ9Y284 106 aa11.05□□□□□ -0.64
CHCHD3-202ENST00000423635 PYYP10082 97 aa11.04□□□□□ -0.64
CHCHD3-202ENST00000423635 ASAH1Q13510 395 aa11.04□□□□□ -0.64
CHCHD3-202ENST00000423635 ZNF266Q14584 549 aa11.04□□□□□ -0.64
CHCHD3-202ENST00000423635 ZNF846Q147U1 533 aa11.04□□□□□ -0.64
CHCHD3-202ENST00000423635 MUC21Q5SSG8 566 aa11.04□□□□□ -0.64
CHCHD3-202ENST00000423635 OR4C5Q8NGB2 326 aa11.04□□□□□ -0.64
CHCHD3-202ENST00000423635 CHAC2Q8WUX2 184 aa11.04□□□□□ -0.64
CHCHD3-202ENST00000423635 MBPP02686 304 aaPredicted RBP11.03□□□□□ -0.64
CHCHD3-202ENST00000423635 PFN1P07737 140 aaKnown RBP11.03□□□□□ -0.64
CHCHD3-202ENST00000423635 VWC2Q2TAL6 325 aa11.03□□□□□ -0.64
CHCHD3-202ENST00000423635 PYDC2Q56P42 97 aa11.03□□□□□ -0.64
CHCHD3-202ENST00000423635 FAM122CQ6P4D5 195 aa11.03□□□□□ -0.64
CHCHD3-202ENST00000423635 NHLRC2Q8NBF2 726 aa11.03□□□□□ -0.64
CHCHD3-202ENST00000423635 CHAC1Q9BUX1 264 aa11.03□□□□□ -0.64
CHCHD3-202ENST00000423635 C20orf85Q9H1P6 137 aa11.03□□□□□ -0.64
CHCHD3-202ENST00000423635 GSKIPQ9P0R6 139 aa11.03□□□□□ -0.64
CHCHD3-202ENST00000423635 TRGV11A0A075B6L2 103 aa11.02□□□□□ -0.65
CHCHD3-202ENST00000423635 IGHV3-30P01768 117 aa11.02□□□□□ -0.65
CHCHD3-202ENST00000423635 IGHV3-33P01772 117 aa11.02□□□□□ -0.65
CHCHD3-202ENST00000423635 IGHV3-30-3P0DP02 117 aa11.02□□□□□ -0.65
CHCHD3-202ENST00000423635 IGHV3-30-5P0DP03 117 aa11.02□□□□□ -0.65
CHCHD3-202ENST00000423635 GATA1P15976 413 aaPredicted RBP11.02□□□□□ -0.65
CHCHD3-202ENST00000423635 OR10J3Q5JRS4 329 aa11.02□□□□□ -0.65
CHCHD3-202ENST00000423635 Q6AWC8 147 aa11.02□□□□□ -0.65
CHCHD3-202ENST00000423635 BCL7BQ9BQE9 202 aa11.02□□□□□ -0.65
CHCHD3-202ENST00000423635 RNF213Q63HN8 5207 aa11.02□□□□□ -0.65
CHCHD3-202ENST00000423635 NDUFB6O95139 128 aa11.01□□□□□ -0.65
CHCHD3-202ENST00000423635 TMBIM6P55061 237 aa11.01□□□□□ -0.65
CHCHD3-202ENST00000423635 TMEM183BQ1AE95 376 aa11.01□□□□□ -0.65
CHCHD3-202ENST00000423635 LELP1Q5T871 98 aa11.01□□□□□ -0.65
CHCHD3-202ENST00000423635 TMEM183AQ8IXX5 376 aa11.01□□□□□ -0.65
CHCHD3-202ENST00000423635 UQCC1Q9NVA1 299 aa11.01□□□□□ -0.65
CHCHD3-202ENST00000423635 V9GYH0 126 aa11.01□□□□□ -0.65
CHCHD3-202ENST00000423635 M0R2P5 195 aa11□□□□□ -0.65
CHCHD3-202ENST00000423635 FAM159AQ6UWV7 190 aa11□□□□□ -0.65
CHCHD3-202ENST00000423635 Q8TAT8 98 aa11□□□□□ -0.65
CHCHD3-202ENST00000423635 CIRBP-AS1Q8TBR5 109 aa11□□□□□ -0.65
CHCHD3-202ENST00000423635 GPN1Q9HCN4 374 aaPredicted RBP11□□□□□ -0.65
CHCHD3-202ENST00000423635 FLVCR2Q9UPI3 526 aa11□□□□□ -0.65
CHCHD3-202ENST00000423635 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
CHCHD3-202ENST00000423635 RBAKDNA6NC62 111 aa10.99□□□□□ -0.65
CHCHD3-202ENST00000423635 L7N2F9 121 aa10.99□□□□□ -0.65
CHCHD3-202ENST00000423635 CST7O76096 145 aa10.99□□□□□ -0.65
CHCHD3-202ENST00000423635 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
CHCHD3-202ENST00000423635 VAMP2P63027 116 aa10.99□□□□□ -0.65
CHCHD3-202ENST00000423635 LINC01620Q4KN68 170 aa10.99□□□□□ -0.65
CHCHD3-202ENST00000423635 FAM167A-AS1Q96KT0 104 aa10.99□□□□□ -0.65
CHCHD3-202ENST00000423635 SLC25A2Q9BXI2 301 aa10.99□□□□□ -0.65
CHCHD3-202ENST00000423635 MRPS26Q9BYN8 205 aaKnown RBP10.99□□□□□ -0.65
CHCHD3-202ENST00000423635 TRAV8-3A0A0A6YYJ7 113 aa10.98□□□□□ -0.65
CHCHD3-202ENST00000423635 IGHV3-16A0A0C4DH30 117 aa10.98□□□□□ -0.65
CHCHD3-202ENST00000423635 LECT2O14960 151 aa10.98□□□□□ -0.65
CHCHD3-202ENST00000423635 BCAP31P51572 246 aa10.98□□□□□ -0.65
CHCHD3-202ENST00000423635 BAK1Q16611 211 aa10.98□□□□□ -0.65
CHCHD3-202ENST00000423635 ACOT6Q3I5F7 207 aaPredicted RBP10.98□□□□□ -0.65
CHCHD3-202ENST00000423635 SLC25A29Q8N8R3 303 aa10.98□□□□□ -0.65
CHCHD3-202ENST00000423635 MITD1Q8WV92 249 aa10.98□□□□□ -0.65
CHCHD3-202ENST00000423635 C11orf1Q9H5F2 150 aa10.98□□□□□ -0.65
CHCHD3-202ENST00000423635 LENEPQ9Y5L5 61 aa10.98□□□□□ -0.65
CHCHD3-202ENST00000423635 IGLV2-8P01709 118 aa10.97□□□□□ -0.65
CHCHD3-202ENST00000423635 GTSF1LQ9H1H1 148 aa10.97□□□□□ -0.65
CHCHD3-202ENST00000423635 LRP2P98164 4655 aa10.97□□□□□ -0.65
CHCHD3-202ENST00000423635 TRBV6-4A0A1B0GX49 114 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 NAP1L6A6NFF2 107 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 FAM24AA6NFZ4 105 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 GNRH2O43555 120 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 CIDEAO60543 219 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 S100A11P31949 105 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 CAV2P51636 162 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 BAXQ07812 192 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 PRADC1Q9BSG0 188 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 KRTAP3-2Q9BYR7 98 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 OR51M1Q9H341 326 aa10.96□□□□□ -0.65
CHCHD3-202ENST00000423635 UBE2L5PA0A1B0GUS4 154 aa10.95□□□□□ -0.66
CHCHD3-202ENST00000423635 RNF222A6NCQ9 220 aa10.95□□□□□ -0.66
CHCHD3-202ENST00000423635 RBFOX3A6NFN3 312 aa10.95□□□□□ -0.66
CHCHD3-202ENST00000423635 FBLL1A6NHQ2 334 aaKnown RBP10.95□□□□□ -0.66
CHCHD3-202ENST00000423635 RS1O15537 224 aa10.95□□□□□ -0.66
CHCHD3-202ENST00000423635 GCSAMLQ5JQS6 135 aa10.95□□□□□ -0.66
CHCHD3-202ENST00000423635 BAALCQ8WXS3 180 aa10.95□□□□□ -0.66
CHCHD3-202ENST00000423635 COX11Q9Y6N1 276 aa10.95□□□□□ -0.66
CHCHD3-202ENST00000423635 CSN1S1P47710 185 aa10.94□□□□□ -0.66
CHCHD3-202ENST00000423635 SULT1A1P50225 295 aa10.94□□□□□ -0.66
CHCHD3-202ENST00000423635 RHOHQ15669 191 aa10.94□□□□□ -0.66
CHCHD3-202ENST00000423635 MIR17HGQ75NE6 70 aa10.94□□□□□ -0.66
CHCHD3-202ENST00000423635 Q8N976 141 aa10.94□□□□□ -0.66
CHCHD3-202ENST00000423635 FXYD5Q96DB9 178 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms