RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 CRYGSP22914 178 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 GTF2A1P52655 376 aaPredicted RBP0.43□□□□□ -2.34
LINC00397-201ENST00000422074 SAMD13Q5VXD3 122 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 NABP2Q9BQ15 211 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 SMIM7Q9BQ49 75 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 FAM103A1Q9BTL3 118 aaKnown RBP0.43□□□□□ -2.34
LINC00397-201ENST00000422074 MPC1Q9Y5U8 109 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 FAM135BQ49AJ0 1406 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 CTTNBP2Q8WZ74 1663 aa0.43□□□□□ -2.34
LINC00397-201ENST00000422074 A2MP01023 1474 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 TRBV7-6A0A0J9YX20 115 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 LOC107984640A0A0U1RRK4 108 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 IFITM5A6NNB3 132 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 FXYD1O00168 92 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 IFNA21P01568 189 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 PRH1P02810 166 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 S100A5P33763 92 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 POLR2HP52434 150 aaKnown RBP0.42□□□□□ -2.34
LINC00397-201ENST00000422074 SPINK13Q1W4C9 94 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 CCSMST1Q4G0I0 132 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 CSAG1Q6PB30 78 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 BRK1Q8WUW1 75 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 SMR3AQ99954 134 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 CENPHQ9H3R5 247 aa0.42□□□□□ -2.34
LINC00397-201ENST00000422074 TMEM30CPA0ZSE6 113 aa0.41□□□□□ -2.34
LINC00397-201ENST00000422074 M0QZK8 103 aa0.41□□□□□ -2.34
LINC00397-201ENST00000422074 LY6G6CO95867 125 aa0.41□□□□□ -2.34
LINC00397-201ENST00000422074 S100GP29377 79 aa0.41□□□□□ -2.34
LINC00397-201ENST00000422074 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
LINC00397-201ENST00000422074 GLYATL3Q5SZD4 288 aa0.41□□□□□ -2.34
LINC00397-201ENST00000422074 C10orf99Q6UWK7 81 aa0.41□□□□□ -2.34
LINC00397-201ENST00000422074 SELENOSQ9BQE4 189 aa0.41□□□□□ -2.34
LINC00397-201ENST00000422074 MRPL35Q9NZE8 188 aaKnown RBP0.41□□□□□ -2.34
LINC00397-201ENST00000422074 TMEM189A5PLL7 270 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 TPST1O60507 370 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 SLC25A4P12235 298 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 IL7P13232 177 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 CKS2P33552 79 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 BLCAPP62952 87 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 TFAMQ00059 246 aaKnown RBP0.4□□□□□ -2.35
LINC00397-201ENST00000422074 TOMM20LQ6UXN7 152 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 SMIM15Q7Z3B0 74 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 OR9Q1Q8NGQ5 310 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 C19orf12Q9NSK7 152 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 CBLN4Q9NTU7 201 aa0.4□□□□□ -2.35
LINC00397-201ENST00000422074 MRPL36Q9P0J6 103 aaKnown RBP0.4□□□□□ -2.35
LINC00397-201ENST00000422074 HIGD1CA8MV81 97 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 CDC42EP2O14613 210 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 RPL7P18124 248 aaKnown RBP0.39□□□□□ -2.35
LINC00397-201ENST00000422074 FXYD3Q14802 87 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 IQCJQ1A5X6 159 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 TMEM128Q5BJH2 165 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 IDO2Q6ZQW0 420 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 TMEM35BQ8NCS4 154 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 OR5A2Q8NGI9 324 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 CCDC115Q96NT0 180 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 CDK12Q9NYV4 1490 aaPredicted RBP0.39□□□□□ -2.35
LINC00397-201ENST00000422074 USP24Q9UPU5 2620 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 MUC4Q99102 2169 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 KMT2DO14686 5537 aa0.39□□□□□ -2.35
LINC00397-201ENST00000422074 FER1L6Q2WGJ9 1857 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 IGHV1-24A0A0C4DH33 117 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 PNMA8CA0A1B0GUJ8 204 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 PGRMC1O00264 195 aaKnown RBP0.38□□□□□ -2.35
LINC00397-201ENST00000422074 IGF2P01344 180 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 HBDP02042 147 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 PCBD1P61457 104 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 ZNF56Q15929 161 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 UNQ5815/PRO19632Q6UWF5 114 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 SKA2Q8WVK7 121 aaPredicted RBP0.38□□□□□ -2.35
LINC00397-201ENST00000422074 DMAC1Q96GE9 116 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 LINC00208Q96KT6 92 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 COMMD3Q9UBI1 195 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 SMPXQ9UHP9 88 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
LINC00397-201ENST00000422074 KDM5CP41229 1560 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 ATG2AQ2TAZ0 1938 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 A0A0G2JMM0 328 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 LOC101927531A0A1B0GV80 90 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 TSTD3H0UI37 97 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 IGKCP01834 107 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 RPL22P35268 128 aaKnown RBP0.37□□□□□ -2.35
LINC00397-201ENST00000422074 PSPHP78330 225 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 LYPD5Q6UWN5 251 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 OTOSQ8NHW6 89 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 NAT14Q8WUY8 206 aa0.37□□□□□ -2.35
LINC00397-201ENST00000422074 UQCRQO14949 82 aa0.36□□□□□ -2.35
LINC00397-201ENST00000422074 SDC4P31431 198 aa0.36□□□□□ -2.35
LINC00397-201ENST00000422074 RPL37P61927 97 aaKnown RBP0.36□□□□□ -2.35
LINC00397-201ENST00000422074 RHOHQ15669 191 aa0.36□□□□□ -2.35
LINC00397-201ENST00000422074 C5orf56Q8N8D9 126 aa0.36□□□□□ -2.35
LINC00397-201ENST00000422074 ATG5Q9H1Y0 275 aa0.36□□□□□ -2.35
LINC00397-201ENST00000422074 CALML5Q9NZT1 146 aa0.36□□□□□ -2.35
LINC00397-201ENST00000422074 GPR98Q8WXG9 6306 aa0.35□□□□□ -2.35
LINC00397-201ENST00000422074 TRPM7Q96QT4 1865 aa0.35□□□□□ -2.35
LINC00397-201ENST00000422074 RREB1Q92766 1687 aa0.35□□□□□ -2.35
LINC00397-201ENST00000422074 NBDYA0A0U1RRE5 68 aa0.35□□□□□ -2.35
LINC00397-201ENST00000422074 J3KT08 172 aa0.35□□□□□ -2.35
LINC00397-201ENST00000422074 CD3DP04234 171 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms