RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 MED9Q9NWA0 146 aa12.75□□□□□ -0.37
LINC00271-201ENST00000421378 TRAV12-3A0A0B4J271 114 aa12.74□□□□□ -0.37
LINC00271-201ENST00000421378 TRBV6-1A0A0K0K1D8 114 aa12.74□□□□□ -0.37
LINC00271-201ENST00000421378 C7orf71A4D174 169 aa12.74□□□□□ -0.37
LINC00271-201ENST00000421378 TMEM250H0YL14 139 aa12.74□□□□□ -0.37
LINC00271-201ENST00000421378 LTAP01374 205 aa12.74□□□□□ -0.37
LINC00271-201ENST00000421378 RBMY1A1P0DJD3 496 aaKnown RBP12.74□□□□□ -0.37
LINC00271-201ENST00000421378 RBMY1CP0DJD4 496 aa12.74□□□□□ -0.37
LINC00271-201ENST00000421378 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
LINC00271-201ENST00000421378 RBMY1FQ15415 496 aaKnown RBP12.74□□□□□ -0.37
LINC00271-201ENST00000421378 C1orf158Q8N1D5 194 aa12.74□□□□□ -0.37
LINC00271-201ENST00000421378 C20orf144Q9BQM9 153 aa12.74□□□□□ -0.37
LINC00271-201ENST00000421378 COL7A1Q02388 2944 aa12.74□□□□□ -0.37
LINC00271-201ENST00000421378 TMEM256Q8N2U0 113 aa12.73□□□□□ -0.37
LINC00271-201ENST00000421378 OR11H2Q8NH07 326 aa12.73□□□□□ -0.37
LINC00271-201ENST00000421378 C8orf49Q96NF6 230 aa12.73□□□□□ -0.37
LINC00271-201ENST00000421378 NIPSNAP3BQ9BS92 247 aa12.73□□□□□ -0.37
LINC00271-201ENST00000421378 ZFP30Q9Y2G7 519 aa12.73□□□□□ -0.37
LINC00271-201ENST00000421378 DNAH9Q9NYC9 4486 aa12.73□□□□□ -0.37
LINC00271-201ENST00000421378 H7BYZ3 331 aa12.72□□□□□ -0.37
LINC00271-201ENST00000421378 NDUFS6O75380 124 aaKnown RBP12.72□□□□□ -0.37
LINC00271-201ENST00000421378 TAS2R60P59551 318 aa12.72□□□□□ -0.37
LINC00271-201ENST00000421378 SMUG1Q53HV7 270 aa12.72□□□□□ -0.37
LINC00271-201ENST00000421378 ZNF324O75467 553 aaPredicted RBP12.71□□□□□ -0.37
LINC00271-201ENST00000421378 GCGP01275 180 aa12.71□□□□□ -0.37
LINC00271-201ENST00000421378 CEBPGP53567 150 aa12.71□□□□□ -0.37
LINC00271-201ENST00000421378 PEA15Q15121 130 aa12.71□□□□□ -0.37
LINC00271-201ENST00000421378 Q6AWC8 147 aa12.71□□□□□ -0.37
LINC00271-201ENST00000421378 BAGE2Q86Y30 109 aa12.71□□□□□ -0.37
LINC00271-201ENST00000421378 LINC01587Q99440 93 aa12.71□□□□□ -0.37
LINC00271-201ENST00000421378 X6R8D5 127 aa12.71□□□□□ -0.37
LINC00271-201ENST00000421378 SRSF3P84103 164 aaKnown RBP12.7□□□□□ -0.38
LINC00271-201ENST00000421378 CENPWQ5EE01 88 aa12.7□□□□□ -0.38
LINC00271-201ENST00000421378 TMEM183AQ8IXX5 376 aa12.7□□□□□ -0.38
LINC00271-201ENST00000421378 NHLRC2Q8NBF2 726 aa12.7□□□□□ -0.38
LINC00271-201ENST00000421378 PARLQ9H300 379 aa12.7□□□□□ -0.38
LINC00271-201ENST00000421378 SMDT1Q9H4I9 107 aa12.7□□□□□ -0.38
LINC00271-201ENST00000421378 TENM3Q9P273 2699 aa12.7□□□□□ -0.38
LINC00271-201ENST00000421378 SRP19P09132 144 aaKnown RBP12.69□□□□□ -0.38
LINC00271-201ENST00000421378 GNG4P50150 75 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 ZNF674Q2M3X9 581 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 COX8CQ7Z4L0 72 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 NEU1Q99519 415 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 PYGO2Q9BRQ0 406 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 HUWE1Q7Z6Z7 4374 aaKnown RBP12.69□□□□□ -0.38
LINC00271-201ENST00000421378 TRAV21A0A0B4J279 112 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 RAB19A4D1S5 217 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 PFN1P07737 140 aaKnown RBP12.69□□□□□ -0.38
LINC00271-201ENST00000421378 MIFP14174 115 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 HTN1P15515 57 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 ZNF80P51504 273 aaPredicted RBP12.69□□□□□ -0.38
LINC00271-201ENST00000421378 Q6ZQT7 251 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 ZC2HC1AQ96GY0 325 aa12.69□□□□□ -0.38
LINC00271-201ENST00000421378 TRBV20OR9-2A0A075B6H5 130 aa12.68□□□□□ -0.38
LINC00271-201ENST00000421378 SMIM9A6NGZ8 99 aa12.68□□□□□ -0.38
LINC00271-201ENST00000421378 RRN3P1Q2M238 152 aa12.68□□□□□ -0.38
LINC00271-201ENST00000421378 U3KQK5 164 aa12.68□□□□□ -0.38
LINC00271-201ENST00000421378 C9JQL5 133 aa12.67□□□□□ -0.38
LINC00271-201ENST00000421378 Q8NAQ8 132 aa12.67□□□□□ -0.38
LINC00271-201ENST00000421378 SMIM12Q96EX1 92 aa12.67□□□□□ -0.38
LINC00271-201ENST00000421378 MLST8Q9BVC4 326 aa12.67□□□□□ -0.38
LINC00271-201ENST00000421378 IGHV4-28A0A0C4DH34 117 aa12.66□□□□□ -0.38
LINC00271-201ENST00000421378 ZNF705GA8MUZ8 300 aaPredicted RBP12.66□□□□□ -0.38
LINC00271-201ENST00000421378 C9JCJ5 164 aa12.66□□□□□ -0.38
LINC00271-201ENST00000421378 PRM2P04554 102 aa12.66□□□□□ -0.38
LINC00271-201ENST00000421378 MUC21Q5SSG8 566 aa12.66□□□□□ -0.38
LINC00271-201ENST00000421378 NAGKQ9UJ70 344 aa12.66□□□□□ -0.38
LINC00271-201ENST00000421378 IGHV1OR15-1A0A075B7D0 117 aa12.65□□□□□ -0.38
LINC00271-201ENST00000421378 FAM162BQ5T6X4 162 aa12.65□□□□□ -0.38
LINC00271-201ENST00000421378 FAM159AQ6UWV7 190 aa12.65□□□□□ -0.38
LINC00271-201ENST00000421378 SMIM7Q9BQ49 75 aa12.65□□□□□ -0.38
LINC00271-201ENST00000421378 PGPEP1LA6NFU8 196 aa12.64□□□□□ -0.39
LINC00271-201ENST00000421378 CBY3A6NI87 242 aa12.64□□□□□ -0.39
LINC00271-201ENST00000421378 FABP5P3A8MUU1 101 aa12.64□□□□□ -0.39
LINC00271-201ENST00000421378 EIF4E3Q8N5X7 224 aaKnown RBP12.64□□□□□ -0.39
LINC00271-201ENST00000421378 LINC00467Q9BRT7 94 aa12.64□□□□□ -0.39
LINC00271-201ENST00000421378 ZNF727A8MUV8 499 aa12.64□□□□□ -0.39
LINC00271-201ENST00000421378 DEFB4AO15263 64 aa12.64□□□□□ -0.39
LINC00271-201ENST00000421378 IGLV2-8P01709 118 aa12.64□□□□□ -0.39
LINC00271-201ENST00000421378 MGST1P10620 155 aaKnown RBP12.64□□□□□ -0.39
LINC00271-201ENST00000421378 CRIP1P50238 77 aa12.64□□□□□ -0.39
LINC00271-201ENST00000421378 PRR27Q6MZM9 219 aa12.64□□□□□ -0.39
LINC00271-201ENST00000421378 TMEM263Q8WUH6 116 aaKnown RBP12.64□□□□□ -0.39
LINC00271-201ENST00000421378 C16orf74Q96GX8 76 aa12.64□□□□□ -0.39
LINC00271-201ENST00000421378 C11orf68Q9H3H3 251 aaKnown RBP12.64□□□□□ -0.39
LINC00271-201ENST00000421378 A0A0J9YWU9 116 aa12.63□□□□□ -0.39
LINC00271-201ENST00000421378 SH2D1AO60880 128 aa12.63□□□□□ -0.39
LINC00271-201ENST00000421378 AZU1P20160 251 aa12.63□□□□□ -0.39
LINC00271-201ENST00000421378 TDRG1Q3Y452 100 aa12.63□□□□□ -0.39
LINC00271-201ENST00000421378 RNASE8Q8TDE3 154 aaKnown RBP12.63□□□□□ -0.39
LINC00271-201ENST00000421378 TGP01266 2768 aa12.63□□□□□ -0.39
LINC00271-201ENST00000421378 TMEM189A5PLL7 270 aa12.62□□□□□ -0.39
LINC00271-201ENST00000421378 ANXA2RQ3ZCQ2 193 aa12.62□□□□□ -0.39
LINC00271-201ENST00000421378 ZNF493Q6ZR52 646 aa12.62□□□□□ -0.39
LINC00271-201ENST00000421378 COMMD7Q86VX2 200 aa12.62□□□□□ -0.39
LINC00271-201ENST00000421378 KCNS1Q96KK3 526 aa12.62□□□□□ -0.39
LINC00271-201ENST00000421378 C11orf21Q9P2W6 132 aa12.62□□□□□ -0.39
LINC00271-201ENST00000421378 LINC00862A6NCI5 91 aa12.61□□□□□ -0.39
LINC00271-201ENST00000421378 EMP1P54849 157 aa12.61□□□□□ -0.39
LINC00271-201ENST00000421378 FAM74A3Q4VXF1 159 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms