RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 LY6G6DO95868 133 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 GFI1BQ5VTD9 330 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 C1orf159Q96HA4 380 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 VPS25Q9BRG1 176 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 PYGO2Q9BRQ0 406 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 SPXQ9BT56 116 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 KLK5Q9Y337 293 aaPredicted RBP8.44□□□□□ -1.06
PTCH1-206ENST00000421141 LSM4Q9Y4Z0 139 aaKnown RBP8.44□□□□□ -1.06
PTCH1-206ENST00000421141 C5orf42Q9H799 3197 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 CGB3P0DN86 165 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 A0A1B0GW64 132 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 M0R2P5 195 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 SSBP2P81877 361 aaPredicted RBP8.44□□□□□ -1.06
PTCH1-206ENST00000421141 S100A7L2Q5SY68 101 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 HIST2H2BCQ6DN03 193 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 ARL6IP6Q8N6S5 226 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 ABCA12Q86UK0 2595 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 TRAV25A0A0B4J276 109 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 ZNF561-AS1K7EIQ3 104 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 FSTL3O95633 263 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 IGHG2P01859 326 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 VWC2Q2TAL6 325 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 PHLDA1Q8WV24 401 aaPredicted RBP8.44□□□□□ -1.06
PTCH1-206ENST00000421141 GFRA4Q9GZZ7 299 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 FASNP49327 2511 aaKnown RBP8.44□□□□□ -1.06
PTCH1-206ENST00000421141 Q6ZSR3 168 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 FABP2P12104 132 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 PLNP26678 52 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 NUP35Q8NFH5 326 aa8.44□□□□□ -1.06
PTCH1-206ENST00000421141 IGHV4OR15-8A0A075B7B6 117 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 A0A087WW49 117 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 ATOH7Q8N100 152 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 Q8N7P7 452 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 LINC00158P58513 81 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 LMO4P61968 165 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 A8MXK9 166 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 C6orf226Q5I0X4 101 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 FGF23Q9GZV9 251 aaPredicted RBP8.43□□□□□ -1.06
PTCH1-206ENST00000421141 LAMTOR2Q9Y2Q5 125 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 PAX4O43316 350 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 SPART-AS1P0CW21 52 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 C8orf49Q96NF6 230 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 MEGF9Q9H1U4 602 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 NOP10Q9NPE3 64 aaKnown RBP8.43□□□□□ -1.06
PTCH1-206ENST00000421141 IGHV3-16A0A0C4DH30 117 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 Q6YL49 198 aa8.43□□□□□ -1.06
PTCH1-206ENST00000421141 PIFOQ8TCI5 191 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 PKIGQ9Y2B9 76 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 ADMP35318 185 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 C16orf74Q96GX8 76 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 C2orf70A6NJV1 201 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 ZNF25P17030 456 aaPredicted RBP8.42□□□□□ -1.06
PTCH1-206ENST00000421141 SHISA2Q6UWI4 295 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 MRPL16Q9NX20 251 aaKnown RBP8.42□□□□□ -1.06
PTCH1-206ENST00000421141 FAM19A2Q8N3H0 131 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 DERL1Q9BUN8 251 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 TMEM242Q9NWH2 141 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 NIT1Q86X76 327 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 IGFBPL1Q8WX77 278 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 AJUBAQ96IF1 538 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 IGLV11-55A0A075B6I3 123 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 RITA1Q96K30 269 aa8.42□□□□□ -1.06
PTCH1-206ENST00000421141 LINC01551Q86U37 167 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 GAGE12JA6NER3 117 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 NCR2O95944 276 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 GAGE1Q13065 139 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 GAGE4Q13068 117 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 GAGE5Q13069 117 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 GAGE13Q4V321 117 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 ZNF491Q8N8L2 437 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 I3L3M4 83 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 MRPL53Q96EL3 112 aaKnown RBP8.41□□□□□ -1.06
PTCH1-206ENST00000421141 C11orf71Q6IPW1 123 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 SH2D6Q7Z4S9 175 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 GPHB5Q86YW7 130 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 TMEM243Q9BU79 118 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 RBAKDNA6NC62 111 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 IGKV1-39P01597 117 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 IGKV1D-39P04432 117 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 APRG1Q8IVJ8 170 aa8.41□□□□□ -1.06
PTCH1-206ENST00000421141 CCL18P55774 89 aa8.4□□□□□ -1.06
PTCH1-206ENST00000421141 RASL10AQ92737 203 aa8.4□□□□□ -1.06
PTCH1-206ENST00000421141 DLX4Q92988 240 aaPredicted RBP8.4□□□□□ -1.06
PTCH1-206ENST00000421141 IGKCP01834 107 aa8.4□□□□□ -1.06
PTCH1-206ENST00000421141 CD300EQ496F6 205 aaPredicted RBP8.4□□□□□ -1.06
PTCH1-206ENST00000421141 CFHR4Q92496 578 aa8.4□□□□□ -1.06
PTCH1-206ENST00000421141 CST9LQ9H4G1 147 aa8.4□□□□□ -1.06
PTCH1-206ENST00000421141 CYTL1Q9NRR1 136 aa8.4□□□□□ -1.06
PTCH1-206ENST00000421141 SMIM13P0DJ93 91 aa8.4□□□□□ -1.06
PTCH1-206ENST00000421141 RHOHQ15669 191 aa8.4□□□□□ -1.06
PTCH1-206ENST00000421141 A6NDX4 124 aa8.4□□□□□ -1.07
PTCH1-206ENST00000421141 IGLV1-47P01700 117 aa8.4□□□□□ -1.07
PTCH1-206ENST00000421141 PRR25Q96S07 402 aa8.4□□□□□ -1.07
PTCH1-206ENST00000421141 JPT2Q9H910 190 aa8.4□□□□□ -1.07
PTCH1-206ENST00000421141 OR2K2Q8NGT1 345 aa8.39□□□□□ -1.07
PTCH1-206ENST00000421141 IGHV3-64A0A075B6Q5 118 aa8.39□□□□□ -1.07
PTCH1-206ENST00000421141 TRAV13-1A0A0B4J241 112 aa8.39□□□□□ -1.07
PTCH1-206ENST00000421141 RPL24P83731 157 aaKnown RBP8.39□□□□□ -1.07
PTCH1-206ENST00000421141 IFI27L1Q96BM0 104 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms