RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 C14orf166Q9Y224 244 aaKnown RBP5.6□□□□□ -1.51
TRIM39-206ENST00000420746 PRELID1Q9Y255 219 aa5.6□□□□□ -1.51
TRIM39-206ENST00000420746 TRAV26-2A0A0B4J265 109 aa5.59□□□□□ -1.51
TRIM39-206ENST00000420746 H3BQ15 152 aa5.59□□□□□ -1.51
TRIM39-206ENST00000420746 H3BTX0 84 aa5.59□□□□□ -1.51
TRIM39-206ENST00000420746 MGST1P10620 155 aaKnown RBP5.59□□□□□ -1.51
TRIM39-206ENST00000420746 UBE2MP61081 183 aaKnown RBP5.59□□□□□ -1.51
TRIM39-206ENST00000420746 SURF2Q15527 256 aaPredicted RBP5.59□□□□□ -1.51
TRIM39-206ENST00000420746 PRR4Q16378 134 aa5.59□□□□□ -1.51
TRIM39-206ENST00000420746 CYB561D1Q8N8Q1 229 aa5.59□□□□□ -1.51
TRIM39-206ENST00000420746 CLRN3Q8NCR9 226 aa5.59□□□□□ -1.51
TRIM39-206ENST00000420746 MARCH1Q8TCQ1 289 aa5.59□□□□□ -1.51
TRIM39-206ENST00000420746 RTBDNQ9BSG5 229 aaPredicted RBP5.59□□□□□ -1.51
TRIM39-206ENST00000420746 VCXQ9H320 206 aa5.59□□□□□ -1.51
TRIM39-206ENST00000420746 IGHV3-64A0A075B6Q5 118 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 PIGBOS1A0A0B4J2F0 54 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 TMEM238LA0A1B0GVL6 79 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 M0R3E3 92 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 MED6O75586 246 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 IAPPP10997 89 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 VAMP1P23763 118 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 TMEM183BQ1AE95 376 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 TMEM78Q5T7P6 136 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 TMEM183AQ8IXX5 376 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 SAMD12Q8N8I0 201 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 GTSF1Q8WW33 167 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 ZNF492Q9P255 531 aa5.58□□□□□ -1.52
TRIM39-206ENST00000420746 A0A087WX48 190 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 SMIM31A0A1B0GVY4 71 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 CD3DP04234 171 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 CHTF8P0CG12 524 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 SMIM18P0DKX4 95 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 HIST1H1EP10412 219 aaKnown RBP5.57□□□□□ -1.52
TRIM39-206ENST00000420746 INPP1P49441 399 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 ZNF266Q14584 549 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 MUC21Q5SSG8 566 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 Q6AWC8 147 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 FAM159AQ6UWV7 190 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 LINC00479Q96M42 142 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 BLOC1S6Q9UL45 172 aa5.57□□□□□ -1.52
TRIM39-206ENST00000420746 TRBV19A0A075B6N1 114 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 SMCO3A2RU48 225 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 PGPA6NDG6 321 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 FNDC10F2Z333 226 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 WRBO00258 174 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 HLA-DQA1P01909 254 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 PDE6HQ13956 83 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 SCGB2B2Q4G0G5 96 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 CFAP126Q5VTH2 177 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 KCNIP4Q6PIL6 250 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 LYZL2Q7Z4W2 148 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 SNX29P2Q8IUI4 249 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 SLC39A9Q9NUM3 307 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 KCNIP3Q9Y2W7 256 aa5.56□□□□□ -1.52
TRIM39-206ENST00000420746 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.55□□□□□ -1.52
TRIM39-206ENST00000420746 DUXBA0A1W2PPF3 345 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 C5orf51A6NDU8 294 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 COX7A2P2O60397 106 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 CRPP02741 224 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 HOXB5P09067 269 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 SLC25A6P12236 298 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 ZNF138P52744 262 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 SRPXP78539 464 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 ENHOQ6UWT2 76 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 Q6ZRP5 223 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 ATP5SQ99766 215 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 GPR132Q9UNW8 380 aa5.55□□□□□ -1.52
TRIM39-206ENST00000420746 STRAPQ9Y3F4 350 aaKnown RBP5.55□□□□□ -1.52
TRIM39-206ENST00000420746 IGKV2-40A0A087WW87 121 aaPredicted RBP5.54□□□□□ -1.52
TRIM39-206ENST00000420746 SYNGR2O43760 224 aa5.54□□□□□ -1.52
TRIM39-206ENST00000420746 IGKV2D-40P01614 121 aaPredicted RBP5.54□□□□□ -1.52
TRIM39-206ENST00000420746 APOA1P02647 267 aa5.54□□□□□ -1.52
TRIM39-206ENST00000420746 FGF8P55075 233 aaPredicted RBP5.54□□□□□ -1.52
TRIM39-206ENST00000420746 CACNG7P62955 275 aa5.54□□□□□ -1.52
TRIM39-206ENST00000420746 SPANXN5Q5MJ07 72 aa5.54□□□□□ -1.52
TRIM39-206ENST00000420746 NPVFQ9HCQ7 196 aa5.54□□□□□ -1.52
TRIM39-206ENST00000420746 GAGE12JA6NER3 117 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 GOSR2O14653 212 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 CTDSPLO15194 276 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 NDUFB4O95168 129 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 RAB3DO95716 219 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 TAS2R19P59542 299 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 SLC38A11Q08AI6 406 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 GAGE1Q13065 139 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 GAGE4Q13068 117 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 GAGE5Q13069 117 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 MIAQ16674 131 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 GAGE13Q4V321 117 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 C10orf113Q5VZT2 155 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 TMEM229BQ8NBD8 167 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 MRPL18Q9H0U6 180 aaKnown RBP5.53□□□□□ -1.52
TRIM39-206ENST00000420746 MTFP1Q9UDX5 166 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 LENEPQ9Y5L5 61 aa5.53□□□□□ -1.52
TRIM39-206ENST00000420746 LOC100506127A0A0U1RQW1 187 aa5.52□□□□□ -1.53
TRIM39-206ENST00000420746 DIRC3C9JPN6 131 aa5.52□□□□□ -1.53
TRIM39-206ENST00000420746 EIF4EBP3O60516 100 aaPredicted RBP5.52□□□□□ -1.53
TRIM39-206ENST00000420746 TCRBP04435 133 aa5.52□□□□□ -1.53
TRIM39-206ENST00000420746 ZNF876PQ49A33 203 aa5.52□□□□□ -1.53
TRIM39-206ENST00000420746 PTH2Q96A98 100 aa5.52□□□□□ -1.53
TRIM39-206ENST00000420746 AAMDCQ9H7C9 122 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms