RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 CDPF1Q6NVV7 123 aa15.81■□□□□ 0.12
GPC1-202ENST00000420138 HAX1O00165 279 aa15.8■□□□□ 0.12
GPC1-202ENST00000420138 ESDP10768 282 aa15.8■□□□□ 0.12
GPC1-202ENST00000420138 FAM231BA6NCW3 169 aa15.8■□□□□ 0.12
GPC1-202ENST00000420138 BMI1P35226 326 aa15.8■□□□□ 0.12
GPC1-202ENST00000420138 BAGE3Q86Y29 109 aa15.8■□□□□ 0.12
GPC1-202ENST00000420138 KIAA1644Q3SXP7 199 aa15.79■□□□□ 0.12
GPC1-202ENST00000420138 C9orf47Q6ZRZ4 202 aa15.79■□□□□ 0.12
GPC1-202ENST00000420138 CITED2Q99967 270 aaPredicted RBP15.79■□□□□ 0.12
GPC1-202ENST00000420138 RNF114Q9Y508 228 aa15.79■□□□□ 0.12
GPC1-202ENST00000420138 ZNF80P51504 273 aaPredicted RBP15.78■□□□□ 0.12
GPC1-202ENST00000420138 PROK1P58294 105 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 OR10J3Q5JRS4 329 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 DPF1Q92782 380 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 DLX4Q92988 240 aaPredicted RBP15.78■□□□□ 0.12
GPC1-202ENST00000420138 RAX2Q96IS3 184 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 A0A1B0GXF2 115 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 SERF1AO75920 110 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 GZMBP10144 247 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 DEFB1P60022 68 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 PAFAH1B2P68402 229 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 FHL3Q13643 280 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 GDF5OSQ5U4N7 250 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 ZNF738Q8NE65 137 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 GTSF1Q8WW33 167 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 MS4A6AQ9H2W1 248 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 PPP1R14DQ9NXH3 145 aa15.78■□□□□ 0.12
GPC1-202ENST00000420138 ZNF705DP0CH99 300 aaPredicted RBP15.77■□□□□ 0.11
GPC1-202ENST00000420138 ZNF705BP0CI00 300 aaPredicted RBP15.77■□□□□ 0.11
GPC1-202ENST00000420138 LINC00310P59036 64 aa15.77■□□□□ 0.11
GPC1-202ENST00000420138 RBPMS2Q6ZRY4 209 aaKnown RBP15.77■□□□□ 0.11
GPC1-202ENST00000420138 OR2D3Q8NGH3 330 aa15.77■□□□□ 0.11
GPC1-202ENST00000420138 OR9G4Q8NGQ1 327 aa15.77■□□□□ 0.11
GPC1-202ENST00000420138 SRIP30626 198 aa15.76■□□□□ 0.11
GPC1-202ENST00000420138 ZNF138P52744 262 aa15.76■□□□□ 0.11
GPC1-202ENST00000420138 SLAQ13239 276 aa15.76■□□□□ 0.11
GPC1-202ENST00000420138 SH2D1AO60880 128 aa15.75■□□□□ 0.11
GPC1-202ENST00000420138 CT45A10P0DMU9 189 aa15.75■□□□□ 0.11
GPC1-202ENST00000420138 HBBP68871 147 aa15.75■□□□□ 0.11
GPC1-202ENST00000420138 PGLYRP4Q96LB8 373 aa15.75■□□□□ 0.11
GPC1-202ENST00000420138 TSSC4Q9Y5U2 329 aaPredicted RBP15.75■□□□□ 0.11
GPC1-202ENST00000420138 A0A1W2PRX2 142 aa15.75■□□□□ 0.11
GPC1-202ENST00000420138 F2Z2F3 143 aa15.75■□□□□ 0.11
GPC1-202ENST00000420138 CAMPP49913 170 aa15.75■□□□□ 0.11
GPC1-202ENST00000420138 OVOL1O14753 267 aa15.74■□□□□ 0.11
GPC1-202ENST00000420138 FOXA3P55318 350 aaPredicted RBP15.74■□□□□ 0.11
GPC1-202ENST00000420138 FAM162BQ5T6X4 162 aa15.74■□□□□ 0.11
GPC1-202ENST00000420138 TMEM78Q5T7P6 136 aa15.74■□□□□ 0.11
GPC1-202ENST00000420138 ZNF575Q86XF7 245 aa15.74■□□□□ 0.11
GPC1-202ENST00000420138 WFDC3Q8IUB2 231 aa15.74■□□□□ 0.11
GPC1-202ENST00000420138 NDFIP1Q9BT67 221 aa15.74■□□□□ 0.11
GPC1-202ENST00000420138 F6UB75 175 aa15.73■□□□□ 0.11
GPC1-202ENST00000420138 K7EQG2 157 aa15.73■□□□□ 0.11
GPC1-202ENST00000420138 CSN3P07498 182 aa15.73■□□□□ 0.11
GPC1-202ENST00000420138 SAMD13Q5VXD3 122 aa15.73■□□□□ 0.11
GPC1-202ENST00000420138 PEMTQ9UBM1 199 aa15.73■□□□□ 0.11
GPC1-202ENST00000420138 ADARB2-AS1A8MUL3 147 aa15.72■□□□□ 0.11
GPC1-202ENST00000420138 LINC00587B1AMM8 73 aa15.72■□□□□ 0.11
GPC1-202ENST00000420138 CCL24O00175 119 aa15.72■□□□□ 0.11
GPC1-202ENST00000420138 TFPI2P48307 235 aa15.72■□□□□ 0.11
GPC1-202ENST00000420138 OR8A1Q8NGG7 326 aa15.72■□□□□ 0.11
GPC1-202ENST00000420138 KRTAP10-3P60369 221 aa15.71■□□□□ 0.11
GPC1-202ENST00000420138 LINC00477Q96M19 166 aa15.71■□□□□ 0.11
GPC1-202ENST00000420138 NIPBLQ6KC79 2804 aaeCLIP15.71■□□□□ 0.11
GPC1-202ENST00000420138 M0QZ24 198 aa15.71■□□□□ 0.1
GPC1-202ENST00000420138 ID1P41134 155 aa15.71■□□□□ 0.1
GPC1-202ENST00000420138 FAM19A4Q96LR4 140 aa15.71■□□□□ 0.1
GPC1-202ENST00000420138 SSBP4Q9BWG4 385 aaPredicted RBP15.71■□□□□ 0.1
GPC1-202ENST00000420138 LENEPQ9Y5L5 61 aa15.71■□□□□ 0.1
GPC1-202ENST00000420138 C2CD3Q4AC94 2353 aa15.7■□□□□ 0.1
GPC1-202ENST00000420138 IQCJQ1A5X6 159 aa15.7■□□□□ 0.1
GPC1-202ENST00000420138 OR10J6PQ8NGY7 276 aa15.7■□□□□ 0.1
GPC1-202ENST00000420138 SAMD10Q9BYL1 202 aa15.7■□□□□ 0.1
GPC1-202ENST00000420138 C18orf32Q8TCD1 76 aa15.69■□□□□ 0.1
GPC1-202ENST00000420138 ZNF688P0C7X2 276 aa15.68■□□□□ 0.1
GPC1-202ENST00000420138 HIST1H1AQ02539 215 aaPredicted RBP15.68■□□□□ 0.1
GPC1-202ENST00000420138 PRR9Q5T870 116 aa15.68■□□□□ 0.1
GPC1-202ENST00000420138 ZFAND2AQ8N6M9 145 aa15.68■□□□□ 0.1
GPC1-202ENST00000420138 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.68■□□□□ 0.1
GPC1-202ENST00000420138 KCNS1Q96KK3 526 aa15.68■□□□□ 0.1
GPC1-202ENST00000420138 ALKBH7Q9BT30 221 aaPredicted RBP15.68■□□□□ 0.1
GPC1-202ENST00000420138 SETD2Q9BYW2 2564 aaPredicted RBP15.68■□□□□ 0.1
GPC1-202ENST00000420138 FABP5P3A8MUU1 101 aa15.68■□□□□ 0.1
GPC1-202ENST00000420138 RCHY1Q96PM5 261 aa15.68■□□□□ 0.1
GPC1-202ENST00000420138 TMEM189A5PLL7 270 aa15.67■□□□□ 0.1
GPC1-202ENST00000420138 GPX1P07203 203 aa15.67■□□□□ 0.1
GPC1-202ENST00000420138 PKIAP61925 76 aa15.67■□□□□ 0.1
GPC1-202ENST00000420138 PSMG4Q5JS54 123 aa15.67■□□□□ 0.1
GPC1-202ENST00000420138 Q6AWC8 147 aa15.67■□□□□ 0.1
GPC1-202ENST00000420138 Q6ZQT7 251 aa15.67■□□□□ 0.1
GPC1-202ENST00000420138 C11orf21Q9P2W6 132 aa15.67■□□□□ 0.1
GPC1-202ENST00000420138 TEP1Q99973 2627 aaKnown RBP15.67■□□□□ 0.1
GPC1-202ENST00000420138 A0A1B0GUT8 65 aa15.66■□□□□ 0.1
GPC1-202ENST00000420138 SCGB1D1O95968 90 aa15.66■□□□□ 0.1
GPC1-202ENST00000420138 RIGQ13278 110 aa15.66■□□□□ 0.1
GPC1-202ENST00000420138 DEFB114Q30KQ6 69 aa15.66■□□□□ 0.1
GPC1-202ENST00000420138 Q6ZWC4 215 aa15.66■□□□□ 0.1
GPC1-202ENST00000420138 TMEM61Q8N0U2 210 aa15.66■□□□□ 0.1
GPC1-202ENST00000420138 TMSB15BA0A087X1C1 80 aa15.66■□□□□ 0.1
GPC1-202ENST00000420138 MAST4O15021 2626 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms