RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 GNPNAT1Q96EK6 184 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-206ENST00000420121 VSIG2Q96IQ7 327 aa7.65□□□□□ -1.18
SSBP3-206ENST00000420121 KRTAP1-5Q9BYS1 174 aa7.65□□□□□ -1.18
SSBP3-206ENST00000420121 AAMDCQ9H7C9 122 aa7.65□□□□□ -1.18
SSBP3-206ENST00000420121 KCNIP2Q9NS61 270 aa7.65□□□□□ -1.18
SSBP3-206ENST00000420121 MBD2Q9UBB5 411 aa7.65□□□□□ -1.18
SSBP3-206ENST00000420121 KLF12Q9Y4X4 402 aa7.65□□□□□ -1.18
SSBP3-206ENST00000420121 C17orf112F2Z3M2 114 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 H3BNG1 76 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 SSNA1O43805 119 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 SPINK4O60575 86 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 GPX1P07203 203 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 RPL12P30050 165 aaKnown RBP7.64□□□□□ -1.19
SSBP3-206ENST00000420121 CCL18P55774 89 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 TCL1AP56279 114 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 SUMO1P63165 101 aaKnown RBP7.64□□□□□ -1.19
SSBP3-206ENST00000420121 ESRGQ1W209 222 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 FFAR4Q5NUL3 377 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 ZNF680Q8NEM1 530 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 SMIM3Q9BZL3 60 aa7.64□□□□□ -1.19
SSBP3-206ENST00000420121 TRBV7-9A0A0J9YWB2 115 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 LOC100996750A0A140TA64 210 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 OR7C2O60412 319 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 ZNF138P52744 262 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 DEFA1P59665 94 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 DEFA3P59666 94 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 RANP62826 216 aaKnown RBP7.63□□□□□ -1.19
SSBP3-206ENST00000420121 IBA57Q5T440 356 aaKnown RBP7.63□□□□□ -1.19
SSBP3-206ENST00000420121 TMEM78Q5T7P6 136 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 ZNF575Q86XF7 245 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 UPK3BQ9BT76 320 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 KRTAP4-6Q9BYQ5 205 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 Q9H3A6 140 aa7.63□□□□□ -1.19
SSBP3-206ENST00000420121 HSPG2P98160 4391 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 PCLOQ9Y6V0 5065 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 IGHV1OR15-1A0A075B7D0 117 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 A0A096LPF7 62 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 RBAKDNA6NC62 111 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 S100A6P06703 90 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 PET100P0DJ07 73 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 MED14OSP0DP75 135 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 UBE2L3P68036 154 aaKnown RBP7.62□□□□□ -1.19
SSBP3-206ENST00000420121 ANKRD39Q53RE8 183 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 SOHLH1Q5JUK2 328 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 LYPD1Q8N2G4 141 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 C6orf223Q8N319 242 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 Q9H8V8 135 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 ALG5Q9Y673 324 aa7.62□□□□□ -1.19
SSBP3-206ENST00000420121 LRP1BQ9NZR2 4599 aa7.61□□□□□ -1.19
SSBP3-206ENST00000420121 TRGV1A0A0A0MS02 117 aa7.61□□□□□ -1.19
SSBP3-206ENST00000420121 DIRC3C9JPN6 131 aa7.61□□□□□ -1.19
SSBP3-206ENST00000420121 ZNF266Q14584 549 aa7.61□□□□□ -1.19
SSBP3-206ENST00000420121 KHDC3LQ587J8 217 aa7.61□□□□□ -1.19
SSBP3-206ENST00000420121 Q6AWC8 147 aa7.61□□□□□ -1.19
SSBP3-206ENST00000420121 MRPL16Q9NX20 251 aaKnown RBP7.61□□□□□ -1.19
SSBP3-206ENST00000420121 MRPS16Q9Y3D3 137 aaKnown RBP7.61□□□□□ -1.19
SSBP3-206ENST00000420121 TRGV2A0A075B6R0 118 aa7.6□□□□□ -1.19
SSBP3-206ENST00000420121 IFNA5P01569 189 aa7.6□□□□□ -1.19
SSBP3-206ENST00000420121 RAB2AP61019 212 aa7.6□□□□□ -1.19
SSBP3-206ENST00000420121 SCGB1C1Q8TD33 95 aa7.6□□□□□ -1.19
SSBP3-206ENST00000420121 ST6GAL2Q96JF0 529 aa7.6□□□□□ -1.19
SSBP3-206ENST00000420121 MDFICQ9P1T7 246 aa7.6□□□□□ -1.19
SSBP3-206ENST00000420121 LENEPQ9Y5L5 61 aa7.6□□□□□ -1.19
SSBP3-206ENST00000420121 RYR1P21817 5038 aa7.59□□□□□ -1.19
SSBP3-206ENST00000420121 CSN1S1P47710 185 aa7.59□□□□□ -1.19
SSBP3-206ENST00000420121 TAS2R45P59539 299 aa7.59□□□□□ -1.19
SSBP3-206ENST00000420121 FHL2Q14192 279 aa7.59□□□□□ -1.19
SSBP3-206ENST00000420121 MUC21Q5SSG8 566 aa7.59□□□□□ -1.19
SSBP3-206ENST00000420121 TVP23CQ96ET8 276 aa7.59□□□□□ -1.19
SSBP3-206ENST00000420121 PGPA6NDG6 321 aa7.58□□□□□ -1.2
SSBP3-206ENST00000420121 IGHV3-53P01767 116 aa7.58□□□□□ -1.2
SSBP3-206ENST00000420121 ACOT6Q3I5F7 207 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-206ENST00000420121 Q5BKY6 102 aa7.58□□□□□ -1.2
SSBP3-206ENST00000420121 CFAP161Q6P656 301 aa7.58□□□□□ -1.2
SSBP3-206ENST00000420121 PQLC2Q6ZP29 291 aa7.58□□□□□ -1.2
SSBP3-206ENST00000420121 TMED6Q8WW62 240 aa7.58□□□□□ -1.2
SSBP3-206ENST00000420121 OTORQ9NRC9 128 aa7.58□□□□□ -1.2
SSBP3-206ENST00000420121 DNAH5Q8TE73 4624 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 TRAV8-1A0A0A6YYK1 113 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 A0A1W2PPQ1 181 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 HMGB3O15347 200 aaKnown RBP7.57□□□□□ -1.2
SSBP3-206ENST00000420121 PTTG1O95997 202 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 CRYBA4P53673 196 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 GNG5P63218 68 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 ZNF415Q09FC8 603 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 TDRG1Q3Y452 100 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 OR2G3Q8NGZ4 309 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 HYLS1Q96M11 299 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 AQP10Q96PS8 301 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
SSBP3-206ENST00000420121 APOBP04114 4563 aaKnown RBP7.56□□□□□ -1.2
SSBP3-206ENST00000420121 PAX4O43316 350 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 STAG3L2P0CL84 134 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 STAG3L3P0CL85 134 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 ARL14EPLP0DKL9 152 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 ATP6V0CP27449 155 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 TMEM183BQ1AE95 376 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 TTC32Q5I0X7 151 aa7.56□□□□□ -1.2
SSBP3-206ENST00000420121 Q6ZRN7 208 aaPredicted RBP7.56□□□□□ -1.2
SSBP3-206ENST00000420121 GOLT1AQ6ZVE7 132 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms