RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 GCSHP23434 173 aa11.52□□□□□ -0.57
SEMA4D-204ENST00000420101 FCGR2BP31994 310 aaPredicted RBP11.52□□□□□ -0.57
SEMA4D-204ENST00000420101 S100A7AQ86SG5 101 aa11.52□□□□□ -0.57
SEMA4D-204ENST00000420101 PRNTQ86SH4 94 aa11.52□□□□□ -0.57
SEMA4D-204ENST00000420101 LRRC75A-AS1Q8N1F1 130 aa11.52□□□□□ -0.57
SEMA4D-204ENST00000420101 TTC9CQ8N5M4 171 aa11.52□□□□□ -0.57
SEMA4D-204ENST00000420101 PSMG3-AS1Q96PY0 264 aa11.52□□□□□ -0.57
SEMA4D-204ENST00000420101 MRPL16Q9NX20 251 aaKnown RBP11.52□□□□□ -0.57
SEMA4D-204ENST00000420101 C5orf64Q2M2E5 130 aa11.51□□□□□ -0.57
SEMA4D-204ENST00000420101 PCP2Q8IVA1 136 aa11.51□□□□□ -0.57
SEMA4D-204ENST00000420101 SGK494Q96LW2 274 aa11.51□□□□□ -0.57
SEMA4D-204ENST00000420101 PRSS47A8MTI9 375 aa11.51□□□□□ -0.57
SEMA4D-204ENST00000420101 D6R8Y8 96 aa11.51□□□□□ -0.57
SEMA4D-204ENST00000420101 NDUFA3O95167 84 aa11.51□□□□□ -0.57
SEMA4D-204ENST00000420101 TGFAP01135 160 aa11.51□□□□□ -0.57
SEMA4D-204ENST00000420101 COX8CQ7Z4L0 72 aa11.51□□□□□ -0.57
SEMA4D-204ENST00000420101 CLUHP3Q96NS8 147 aa11.51□□□□□ -0.57
SEMA4D-204ENST00000420101 MED13LQ71F56 2210 aa11.5□□□□□ -0.57
SEMA4D-204ENST00000420101 IGLL5B9A064 214 aa11.5□□□□□ -0.57
SEMA4D-204ENST00000420101 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
SEMA4D-204ENST00000420101 GATA3P23771 443 aa11.5□□□□□ -0.57
SEMA4D-204ENST00000420101 FXYD2P54710 66 aa11.5□□□□□ -0.57
SEMA4D-204ENST00000420101 Q96MF0 132 aa11.5□□□□□ -0.57
SEMA4D-204ENST00000420101 RASL11BQ9BPW5 248 aa11.5□□□□□ -0.57
SEMA4D-204ENST00000420101 NAA38Q9BRA0 125 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-204ENST00000420101 ZNF785A8K8V0 405 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 SRSF2Q01130 221 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 EBI3Q14213 229 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 GAGE13Q4V321 117 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 KLF17Q5JT82 389 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 ZNF562Q6V9R5 426 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 GOLT1AQ6ZVE7 132 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 ZNF479Q96JC4 524 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 NXT2Q9NPJ8 142 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 PSG8Q9UQ74 426 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 CYSLTR1Q9Y271 337 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 WNK2Q9Y3S1 2297 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 SPG11Q96JI7 2443 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 TEX22C9J3V5 150 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 LOXL1Q08397 574 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 TWIST1Q15672 202 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 ARPC1AQ92747 370 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 AJUBAQ96IF1 538 aa11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 SPAG8Q99932 426 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-204ENST00000420101 IGHV3-48P01763 117 aa11.48□□□□□ -0.57
SEMA4D-204ENST00000420101 IGKCP01834 107 aa11.48□□□□□ -0.57
SEMA4D-204ENST00000420101 FCER1GP30273 86 aa11.48□□□□□ -0.57
SEMA4D-204ENST00000420101 Q8N6K4 173 aa11.48□□□□□ -0.57
SEMA4D-204ENST00000420101 ZNF418Q8TF45 676 aaPredicted RBP11.48□□□□□ -0.57
SEMA4D-204ENST00000420101 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
SEMA4D-204ENST00000420101 HHLA3Q9XRX5 114 aa11.48□□□□□ -0.57
SEMA4D-204ENST00000420101 LRRK2Q5S007 2527 aa11.48□□□□□ -0.57
SEMA4D-204ENST00000420101 KMT2BQ9UMN6 2715 aaPredicted RBP11.47□□□□□ -0.57
SEMA4D-204ENST00000420101 TRBV25-1A0A075B6N4 114 aa11.47□□□□□ -0.57
SEMA4D-204ENST00000420101 IGHV3-21A0A0B4J1V1 117 aa11.47□□□□□ -0.57
SEMA4D-204ENST00000420101 PDE6HQ13956 83 aa11.47□□□□□ -0.57
SEMA4D-204ENST00000420101 ODF1Q14990 250 aa11.47□□□□□ -0.57
SEMA4D-204ENST00000420101 MRPL51Q4U2R6 128 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-204ENST00000420101 F11RQ9Y624 299 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-204ENST00000420101 TRBV19A0A075B6N1 114 aa11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 A0A096LNT2 108 aa11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 A0A1B0GWB2 263 aa11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 OR11H12B2RN74 326 aa11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 DPM2O94777 84 aa11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 CKS2P33552 79 aa11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 OR11H1Q8NG94 326 aa11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 OR11H2Q8NH07 326 aa11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 SRSF8Q9BRL6 282 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 GEMIN7Q9H840 131 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 MRPL36Q9P0J6 103 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 TNCP24821 2201 aa11.46□□□□□ -0.57
SEMA4D-204ENST00000420101 LOC389332A0A1B0GUA5 103 aa11.46□□□□□ -0.58
SEMA4D-204ENST00000420101 WI2-2373I1.2A0A1W2PRP0 233 aa11.46□□□□□ -0.58
SEMA4D-204ENST00000420101 WFDC2Q14508 124 aa11.46□□□□□ -0.58
SEMA4D-204ENST00000420101 FAM106AQ4KMX7 169 aa11.46□□□□□ -0.58
SEMA4D-204ENST00000420101 TMEM219Q86XT9 240 aa11.46□□□□□ -0.58
SEMA4D-204ENST00000420101 Q8N9W7 124 aa11.46□□□□□ -0.58
SEMA4D-204ENST00000420101 NHP2Q9NX24 153 aaKnown RBP11.46□□□□□ -0.58
SEMA4D-204ENST00000420101 NPIPB5A8MRT5 1133 aa11.45□□□□□ -0.58
SEMA4D-204ENST00000420101 AVPP01185 164 aa11.45□□□□□ -0.58
SEMA4D-204ENST00000420101 IGHV4-31P0DP07 118 aa11.45□□□□□ -0.58
SEMA4D-204ENST00000420101 RRN3P1Q2M238 152 aa11.45□□□□□ -0.58
SEMA4D-204ENST00000420101 TRAV8-1A0A0A6YYK1 113 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 H3BMG7 143 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 J3QLI3 93 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 CRYBA4P53673 196 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 C12orf74Q32Q52 190 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 PRR31Q5SQ13 230 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 LYZL1Q6UWQ5 148 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 DKK2Q9UBU2 259 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 PRO0461Q9UI25 63 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 UTP20O75691 2785 aaKnown RBP11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 LY6EQ16553 131 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 LYRM7Q5U5X0 104 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 AMN1Q8IY45 258 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 SHANK2-AS3Q9BTD1 123 aa11.44□□□□□ -0.58
SEMA4D-204ENST00000420101 TRAV26-1A0A087WT03 109 aa11.43□□□□□ -0.58
SEMA4D-204ENST00000420101 ETDBQ3ZM63 59 aa11.43□□□□□ -0.58
SEMA4D-204ENST00000420101 SIGLEC15Q6ZMC9 328 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms