RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 TTC9CQ8N5M4 171 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 LY6G5BQ8NDX9 201 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 A0A1W2PPR1 153 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 LINC01546A6NGU7 62 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 NCBP2LA6PVI3 153 aaKnown RBP9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 EVI2AP22794 236 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 LINC01559Q495D7 138 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 SAMD5Q5TGI4 173 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 HIGD1BQ9P298 99 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 IGKCP01834 107 aa9.93□□□□□ -0.82
LRRTM1-205ENST00000417012 NDPQ00604 133 aa9.93□□□□□ -0.82
LRRTM1-205ENST00000417012 CHAC1Q9BUX1 264 aa9.93□□□□□ -0.82
LRRTM1-205ENST00000417012 SMAD5-AS1Q9Y6J3 95 aa9.93□□□□□ -0.82
LRRTM1-205ENST00000417012 IGKV2D-26A0A0A0MRZ7 120 aa9.93□□□□□ -0.82
LRRTM1-205ENST00000417012 GAS8-AS1O95177 125 aa9.93□□□□□ -0.82
LRRTM1-205ENST00000417012 IGHG4P01861 327 aa9.93□□□□□ -0.82
LRRTM1-205ENST00000417012 FOXC2Q99958 501 aa9.93□□□□□ -0.82
LRRTM1-205ENST00000417012 ZMAT4Q9H898 229 aa9.93□□□□□ -0.82
LRRTM1-205ENST00000417012 ATP5LO75964 103 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 FXYD2P54710 66 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 GTSF1LQ9H1H1 148 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 HHLA3Q9XRX5 114 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 IGHV3OR16-8A0A075B7F1 116 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 DPM2O94777 84 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 CTSGP08311 255 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 C11orf71Q6IPW1 123 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 DYNAPQ8N1N2 210 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 TMEM158Q8WZ71 300 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 SMPXQ9UHP9 88 aa9.92□□□□□ -0.82
LRRTM1-205ENST00000417012 ERCC8Q13216 396 aa9.91□□□□□ -0.82
LRRTM1-205ENST00000417012 ZNF575Q86XF7 245 aa9.91□□□□□ -0.82
LRRTM1-205ENST00000417012 TIMD4Q96H15 378 aa9.91□□□□□ -0.82
LRRTM1-205ENST00000417012 TTTY13Q9BZ97 58 aa9.91□□□□□ -0.82
LRRTM1-205ENST00000417012 CACNA1BQ00975 2339 aa9.91□□□□□ -0.82
LRRTM1-205ENST00000417012 MAP1AP78559 2803 aaPredicted RBP9.91□□□□□ -0.82
LRRTM1-205ENST00000417012 SMIM17P0DL12 118 aa9.91□□□□□ -0.82
LRRTM1-205ENST00000417012 PPIFP30405 207 aaKnown RBP9.91□□□□□ -0.82
LRRTM1-205ENST00000417012 CCDC144NLQ6NUI1 221 aa9.91□□□□□ -0.82
LRRTM1-205ENST00000417012 IGHV3-35A0A0C4DH35 117 aa9.9□□□□□ -0.82
LRRTM1-205ENST00000417012 ODF3BA8MYP8 253 aa9.9□□□□□ -0.82
LRRTM1-205ENST00000417012 M0R1W7 72 aa9.9□□□□□ -0.82
LRRTM1-205ENST00000417012 ZC2HC1BQ5TFG8 222 aa9.9□□□□□ -0.82
LRRTM1-205ENST00000417012 GTSCR1Q86UQ5 136 aa9.9□□□□□ -0.82
LRRTM1-205ENST00000417012 Q8N8P6 123 aa9.9□□□□□ -0.82
LRRTM1-205ENST00000417012 TRAV26-1A0A087WT03 109 aa9.9□□□□□ -0.82
LRRTM1-205ENST00000417012 GATA1P15976 413 aaPredicted RBP9.9□□□□□ -0.82
LRRTM1-205ENST00000417012 DTX2Q86UW9 622 aa9.9□□□□□ -0.82
LRRTM1-205ENST00000417012 TRBV25-1A0A075B6N4 114 aa9.9□□□□□ -0.83
LRRTM1-205ENST00000417012 PRTN3P24158 256 aa9.9□□□□□ -0.83
LRRTM1-205ENST00000417012 TMEM8BA6NDV4 472 aa9.89□□□□□ -0.83
LRRTM1-205ENST00000417012 IL17RELQ6ZVW7 336 aa9.89□□□□□ -0.83
LRRTM1-205ENST00000417012 PRAC2D3DTV9 90 aa9.89□□□□□ -0.83
LRRTM1-205ENST00000417012 K7ERJ3 54 aa9.89□□□□□ -0.83
LRRTM1-205ENST00000417012 ZFP36P26651 326 aaKnown RBP9.89□□□□□ -0.83
LRRTM1-205ENST00000417012 RAB9AP51151 201 aa9.89□□□□□ -0.83
LRRTM1-205ENST00000417012 CRYBA4P53673 196 aa9.89□□□□□ -0.83
LRRTM1-205ENST00000417012 RPL24P83731 157 aaKnown RBP9.89□□□□□ -0.83
LRRTM1-205ENST00000417012 NHP2Q9NX24 153 aaKnown RBP9.89□□□□□ -0.83
LRRTM1-205ENST00000417012 RBAKDNA6NC62 111 aa9.88□□□□□ -0.83
LRRTM1-205ENST00000417012 HLA-DRB4P13762 266 aa9.88□□□□□ -0.83
LRRTM1-205ENST00000417012 RNF182Q8N6D2 247 aa9.88□□□□□ -0.83
LRRTM1-205ENST00000417012 PSMG3-AS1Q96PY0 264 aa9.88□□□□□ -0.83
LRRTM1-205ENST00000417012 TMEM160Q9NX00 188 aa9.88□□□□□ -0.83
LRRTM1-205ENST00000417012 HLA-DRB4X5D2U9 266 aa9.88□□□□□ -0.83
LRRTM1-205ENST00000417012 CEND1Q8N111 149 aa9.88□□□□□ -0.83
LRRTM1-205ENST00000417012 MYOZ3Q8TDC0 251 aa9.88□□□□□ -0.83
LRRTM1-205ENST00000417012 SLC50A1Q9BRV3 221 aa9.88□□□□□ -0.83
LRRTM1-205ENST00000417012 VMO1Q7Z5L0 202 aa9.88□□□□□ -0.83
LRRTM1-205ENST00000417012 Q8N6K4 173 aa9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 TM2D2Q9BX73 214 aa9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 UBTD1Q9HAC8 227 aa9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 UFC1Q9Y3C8 167 aa9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 IGLV2-18A0A075B6J9 118 aa9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 TRAV40A0A0B4J280 105 aa9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 IGKV3D-20A0A0C4DH25 116 aa9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 TRGV3P03979 118 aa9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 LAGE3Q14657 143 aa9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 MRPL35Q9NZE8 188 aaKnown RBP9.87□□□□□ -0.83
LRRTM1-205ENST00000417012 IGHV7-81A0A0B4J1V7 117 aa9.86□□□□□ -0.83
LRRTM1-205ENST00000417012 OOSP1A8MZH6 123 aa9.86□□□□□ -0.83
LRRTM1-205ENST00000417012 BUB3O43684 328 aa9.86□□□□□ -0.83
LRRTM1-205ENST00000417012 AZU1P20160 251 aa9.86□□□□□ -0.83
LRRTM1-205ENST00000417012 C15orf32Q32M92 178 aa9.86□□□□□ -0.83
LRRTM1-205ENST00000417012 PHLDA1Q8WV24 401 aaPredicted RBP9.86□□□□□ -0.83
LRRTM1-205ENST00000417012 SRSF1Q07955 248 aaKnown RBP eCLIP9.86□□□□□ -0.83
LRRTM1-205ENST00000417012 TMEM78Q5T7P6 136 aa9.86□□□□□ -0.83
LRRTM1-205ENST00000417012 PKD1L2Q7Z442 2459 aa9.86□□□□□ -0.83
LRRTM1-205ENST00000417012 TEX48A0A1B0GUV7 120 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 ATP6V0BQ99437 205 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 ZFAND3Q9H8U3 227 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 CSMD2Q7Z408 3487 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 IGHV3-66A0A0C4DH42 116 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 CKS1BP61024 79 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 ZNF502Q8TBZ5 544 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 AGPAT4-IT1Q9H0P7 198 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 EBI3Q14213 229 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 ECSCRQ19T08 205 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 C11orf21Q9P2W6 132 aa9.85□□□□□ -0.83
LRRTM1-205ENST00000417012 A0A087WX48 190 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms