RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CRIP1P50238 77 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 INSL3P51460 131 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 ZNF80P51504 273 aaPredicted RBP4.94□□□□□ -1.62
VPS41-204ENST00000413141 SMUG1Q53HV7 270 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 CT83Q5H943 113 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 FAM162BQ5T6X4 162 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 PRR9Q5T870 116 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 C9orf66Q5T8R8 295 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 EBLN2Q6P2I7 272 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 APRG1Q8IVJ8 170 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 ZFAND2AQ8N6M9 145 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.94□□□□□ -1.62
VPS41-204ENST00000413141 OR4B1Q8NGF8 309 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 ODF3Q96PU9 254 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 IMMP2LQ96T52 175 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 RPP21Q9H633 154 aaKnown RBP4.94□□□□□ -1.62
VPS41-204ENST00000413141 IL36BQ9NZH7 164 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 URGCP-MRPS24S4R325 110 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 HLA-DRB4X5D2U9 266 aa4.94□□□□□ -1.62
VPS41-204ENST00000413141 A6NJY4 79 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 KNCNA6PVL3 124 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 COLCA2A8K830 154 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 A8MTW9 85 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 KLLNB2CW77 178 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 OR11H12B2RN74 326 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 PFN1P07737 140 aaKnown RBP4.93□□□□□ -1.62
VPS41-204ENST00000413141 S100PP25815 95 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 ELOBQ15370 118 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 ZNF124Q15973 351 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 BEAN1Q3B7T3 259 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 ACTL10Q5JWF8 245 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 KCNIP4Q6PIL6 250 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 AMTNQ6UX39 209 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 WFDC9Q8NEX5 89 aa4.93□□□□□ -1.62
VPS41-204ENST00000413141 DAZAP1Q96EP5 407 aaKnown RBP4.93□□□□□ -1.62
VPS41-204ENST00000413141 MCRIP2Q9BUT9 160 aaKnown RBP4.93□□□□□ -1.62
VPS41-204ENST00000413141 TGIF2-C20orf24A0A0A6YYL0 155 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 A0A1W2PPQ1 181 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 SMIM27A0A1W2PRY6 76 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 RBMY1BA6NDE4 496 aaKnown RBP4.92□□□□□ -1.62
VPS41-204ENST00000413141 RBMY1EA6NEQ0 496 aaKnown RBP4.92□□□□□ -1.62
VPS41-204ENST00000413141 H3BMM0 161 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 J3KRW8 73 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 IGKV3-20P01619 116 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 CXCL1P09341 107 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 RBMY1DP0C7P1 496 aaKnown RBP4.92□□□□□ -1.62
VPS41-204ENST00000413141 LEPP41159 167 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 TCL1AP56279 114 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 FAM3BP58499 235 aaPredicted RBP4.92□□□□□ -1.62
VPS41-204ENST00000413141 RPL19P84098 196 aaKnown RBP4.92□□□□□ -1.62
VPS41-204ENST00000413141 Q6AWC8 147 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 OR2D3Q8NGH3 330 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 TSKUQ8WUA8 353 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 NEU1Q99519 415 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 FAM110AQ9BQ89 295 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 PYGO2Q9BRQ0 406 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 C19orf73Q9NVV2 129 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 VWFP04275 2813 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 ANK2Q01484 3957 aa4.92□□□□□ -1.62
VPS41-204ENST00000413141 TRBV24-1A0A075B6N3 115 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 TRAV9-1A0A075B6T8 112 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 TRAV21A0A0B4J279 112 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 C7orf71A4D174 169 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 TMEM189A5PLL7 270 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 FABP5P3A8MUU1 101 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 A8MWL6 223 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 M0R2Z0 102 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 GPX1P07203 203 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 CD7P09564 240 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 IGLL1P15814 213 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 RAB5AP20339 215 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 TSPOP30536 169 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 CDKN1BP46527 198 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 CMC4P56277 68 aaPredicted RBP4.91□□□□□ -1.62
VPS41-204ENST00000413141 KIR3DS1Q14943 382 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 SPINK13Q1W4C9 94 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 GFI1BQ5VTD9 330 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 Q6ZQT7 251 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 GTSF1Q8WW33 167 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 CLUHP3Q96NS8 147 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 GFRA4Q9GZZ7 299 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 WFDC10AQ9H1F0 79 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 C11orf21Q9P2W6 132 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 NAT8BQ9UHF3 227 aa4.91□□□□□ -1.62
VPS41-204ENST00000413141 TRAV12-2A0A075B6T6 113 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 TMSB15BA0A087X1C1 80 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 IGKV3D-20A0A0C4DH25 116 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 XKRY2A2RUG3 117 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 FAM231BA6NCW3 169 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 HIGD1CA8MV81 97 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 ORM1P02763 201 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 TYMSP04818 313 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 GZMBP10144 247 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 RNASE4P34096 147 aaKnown RBP4.9□□□□□ -1.63
VPS41-204ENST00000413141 RPS20P60866 119 aaKnown RBP4.9□□□□□ -1.63
VPS41-204ENST00000413141 TRPT1Q86TN4 253 aaKnown RBP4.9□□□□□ -1.63
VPS41-204ENST00000413141 GTSCR1Q86UQ5 136 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 STHQ8IWL8 128 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 NUP35Q8NFH5 326 aa4.9□□□□□ -1.63
VPS41-204ENST00000413141 BTF3L4Q96K17 158 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms