RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SCP2D1Q9UJQ7 156 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 RAB26Q9ULW5 256 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 RABL2BQ9UNT1 228 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 PRELID1Q9Y255 219 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 TIMM9Q9Y5J7 89 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 URGCP-MRPS24S4R325 110 aa1.53□□□□□ -2.16
RNU4-53P-201ENST00000410828 FAT4Q6V0I7 4981 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 TRBV19A0A075B6N1 114 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 A0A087WWC5 75 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 A0A0J9YXV3 536 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 TRBV6-4A0A1B0GX49 114 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 FBLL1A6NHQ2 334 aaKnown RBP1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 FNDC10F2Z333 226 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 AGPAT2O15120 278 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 HOXB5P09067 269 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 AKAIN1P0CW23 69 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 MGST1P10620 155 aaKnown RBP1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 VAMP1P23763 118 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 ZNF138P52744 262 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 RRAS2P62070 204 aaPredicted RBP1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 Q0VG73 95 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 PDE6HQ13956 83 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 ZNF266Q14584 549 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 ODF1Q14990 250 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 ELOBQ15370 118 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 TMEM183BQ1AE95 376 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 TMEM128Q5BJH2 165 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 PRR9Q5T870 116 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 DGAT2L7PQ6IED9 249 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 KCNIP4Q6PIL6 250 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 Q6ZQT7 251 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 DAZ4Q86SG3 579 aaKnown RBP1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 TMEM183AQ8IXX5 376 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 Q8N3U1 123 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 C12orf45Q8N5I9 185 aaPredicted RBP1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 SLC25A29Q8N8R3 303 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 C9orf163Q8N9P6 203 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 OR10G9Q8NGN4 311 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 OR1L4Q8NGR5 311 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 DYNC2LI1Q8TCX1 351 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 RAB2BQ8WUD1 216 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 SMIM4Q8WVI0 70 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 AP3S1Q92572 193 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 UBE2WQ96B02 151 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 DPH3Q96FX2 82 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 ZC2HC1AQ96GY0 325 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 SMIM8Q96KF7 97 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 PFDN5Q99471 154 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 ATP5SQ99766 215 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 Q9H521 79 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 GPN1Q9HCN4 374 aaPredicted RBP1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 VCX3AQ9NNX9 186 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 DAZ3Q9NR90 486 aaKnown RBP1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 MCUBQ9NWR8 336 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 PSENENQ9NZ42 101 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 TMEM14CQ9P0S9 112 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 NAGKQ9UJ70 344 aa1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.52□□□□□ -2.17
RNU4-53P-201ENST00000410828 IGKV2-40A0A087WW87 121 aaPredicted RBP1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 A0A087WX48 190 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 IGHV3-73A0A0B4J1V6 119 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 RBAKDNA6NC62 111 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 PGPA6NDG6 321 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 C5orf51A6NDU8 294 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 GAGE12JA6NER3 117 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 CTDSPLO15194 276 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 GNRH2O43555 120 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 SSSCA1O60232 199 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 TSC22D2O75157 780 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 NDUFB4O95168 129 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 SFT2D2O95562 160 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 IGKV2D-40P01614 121 aaPredicted RBP1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 METTL15P1P0C7V9 234 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 FAUP35544 74 aaKnown RBP1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 CSN1S1P47710 185 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 CAMLGP49069 296 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 INPP1P49441 399 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 FGF8P55075 233 aaPredicted RBP1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 TAS2R30P59541 319 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 KRTAP10-8P60410 259 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 VBP1P61758 197 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 NCS1P62166 190 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 RPL19P84098 196 aaKnown RBP1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 ID3Q02535 119 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 GAGE1Q13065 139 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 GAGE4Q13068 117 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 GAGE5Q13069 117 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 ZNF876PQ49A33 203 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 GAGE13Q4V321 117 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 CFAP126Q5VTH2 177 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 Q6AWC8 147 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 WDR73Q6P4I2 378 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 REG3GQ6UW15 175 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 ATRAIDQ6UW56 229 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 TMEM14EPQ6UXP3 125 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 DPPA3Q6W0C5 159 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 SDIM1Q6ZPB5 146 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 NIT1Q86X76 327 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 EXOC3-AS1Q8N2X6 119 aa1.51□□□□□ -2.17
RNU4-53P-201ENST00000410828 CYB561D1Q8N8Q1 229 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms