RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 ATP5J2P56134 94 aa18.27■□□□□ 0.52
PMS1-205ENST00000409985 LGALS9BQ3B8N2 356 aa18.27■□□□□ 0.52
PMS1-205ENST00000409985 IGFL4Q6B9Z1 124 aa18.27■□□□□ 0.52
PMS1-205ENST00000409985 LGALS9CQ6DKI2 356 aa18.27■□□□□ 0.52
PMS1-205ENST00000409985 LENEPQ9Y5L5 61 aa18.27■□□□□ 0.52
PMS1-205ENST00000409985 IGHV3-35A0A0C4DH35 117 aa18.26■□□□□ 0.51
PMS1-205ENST00000409985 PRAC2D3DTV9 90 aa18.26■□□□□ 0.51
PMS1-205ENST00000409985 H3BUA1 57 aa18.26■□□□□ 0.51
PMS1-205ENST00000409985 HBDP02042 147 aa18.26■□□□□ 0.51
PMS1-205ENST00000409985 PRB4P10163 310 aaPredicted RBP18.26■□□□□ 0.51
PMS1-205ENST00000409985 HINT1P49773 126 aaPredicted RBP18.26■□□□□ 0.51
PMS1-205ENST00000409985 DEFB113Q30KQ7 82 aa18.26■□□□□ 0.51
PMS1-205ENST00000409985 PIFOQ8TCI5 191 aa18.26■□□□□ 0.51
PMS1-205ENST00000409985 PIMREGQ9BSJ6 248 aa18.26■□□□□ 0.51
PMS1-205ENST00000409985 CELSR1Q9NYQ6 3014 aa18.26■□□□□ 0.51
PMS1-205ENST00000409985 TRAV8-2A0A0B4J237 113 aa18.25■□□□□ 0.51
PMS1-205ENST00000409985 TCF21O43680 179 aa18.25■□□□□ 0.51
PMS1-205ENST00000409985 IGF1P05019 195 aa18.25■□□□□ 0.51
PMS1-205ENST00000409985 ERCC8Q13216 396 aa18.25■□□□□ 0.51
PMS1-205ENST00000409985 TMEM78Q5T7P6 136 aa18.25■□□□□ 0.51
PMS1-205ENST00000409985 AGPAT4-IT1Q9H0P7 198 aa18.25■□□□□ 0.51
PMS1-205ENST00000409985 IGHV3OR16-8A0A075B7F1 116 aa18.24■□□□□ 0.51
PMS1-205ENST00000409985 RNF185Q96GF1 192 aa18.24■□□□□ 0.51
PMS1-205ENST00000409985 C12orf54Q6X4T0 127 aa18.24■□□□□ 0.51
PMS1-205ENST00000409985 C8orf86Q6ZUL3 223 aa18.24■□□□□ 0.51
PMS1-205ENST00000409985 KRTAP1-3Q8IUG1 177 aa18.24■□□□□ 0.51
PMS1-205ENST00000409985 OR1N2Q8NGR9 330 aa18.24■□□□□ 0.51
PMS1-205ENST00000409985 PRRC2AP48634 2157 aaKnown RBP18.24■□□□□ 0.51
PMS1-205ENST00000409985 PSMG4Q5JS54 123 aa18.23■□□□□ 0.51
PMS1-205ENST00000409985 MAP1LC3AQ9H492 121 aa18.23■□□□□ 0.51
PMS1-205ENST00000409985 MED13LQ71F56 2210 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 NPYP01303 97 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 COX8AP10176 69 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 C9orf139Q6ZV77 190 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 IL17RELQ6ZVW7 336 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 SVEP1Q4LDE5 3571 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 LOC389332A0A1B0GUA5 103 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 NPSP0C0P6 89 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 RNF182Q8N6D2 247 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 C10orf105Q8TEF2 133 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 GLMPQ8WWB7 406 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 USMG5Q96IX5 58 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 NXT2Q9NPJ8 142 aaKnown RBP18.22■□□□□ 0.51
PMS1-205ENST00000409985 BEX4Q9NWD9 120 aaPredicted RBP18.22■□□□□ 0.51
PMS1-205ENST00000409985 COX11Q9Y6N1 276 aa18.22■□□□□ 0.51
PMS1-205ENST00000409985 FAM106AQ4KMX7 169 aa18.21■□□□□ 0.51
PMS1-205ENST00000409985 DEFB125Q8N687 156 aa18.21■□□□□ 0.51
PMS1-205ENST00000409985 ZNF738Q8NE65 137 aa18.21■□□□□ 0.51
PMS1-205ENST00000409985 ZANQ9Y493 2812 aa18.21■□□□□ 0.5
PMS1-205ENST00000409985 IGHV4-4A0A075B6R2 117 aa18.2■□□□□ 0.5
PMS1-205ENST00000409985 NDUFA4O00483 81 aa18.2■□□□□ 0.5
PMS1-205ENST00000409985 LOXL1Q08397 574 aaPredicted RBP18.2■□□□□ 0.5
PMS1-205ENST00000409985 WNK2Q9Y3S1 2297 aa18.2■□□□□ 0.5
PMS1-205ENST00000409985 OTOGQ6ZRI0 2925 aa18.2■□□□□ 0.5
PMS1-205ENST00000409985 FOSL1P15407 271 aa18.2■□□□□ 0.5
PMS1-205ENST00000409985 IGHV4-30-2A0A087WSY4 118 aa18.19■□□□□ 0.5
PMS1-205ENST00000409985 IGKV3D-20A0A0C4DH25 116 aa18.19■□□□□ 0.5
PMS1-205ENST00000409985 PRSS47A8MTI9 375 aa18.19■□□□□ 0.5
PMS1-205ENST00000409985 TRGV3P03979 118 aa18.19■□□□□ 0.5
PMS1-205ENST00000409985 IGHG2P01859 326 aa18.18■□□□□ 0.5
PMS1-205ENST00000409985 ARL3P36405 182 aa18.18■□□□□ 0.5
PMS1-205ENST00000409985 CYSRT1A8MQ03 144 aa18.18■□□□□ 0.5
PMS1-205ENST00000409985 NCR2O95944 276 aa18.18■□□□□ 0.5
PMS1-205ENST00000409985 CACNG7P62955 275 aa18.18■□□□□ 0.5
PMS1-205ENST00000409985 TMEM219Q86XT9 240 aa18.18■□□□□ 0.5
PMS1-205ENST00000409985 IFI27L1Q96BM0 104 aa18.18■□□□□ 0.5
PMS1-205ENST00000409985 MYO9AB2RTY4 2548 aa18.17■□□□□ 0.5
PMS1-205ENST00000409985 ITPR3Q14573 2671 aa18.17■□□□□ 0.5
PMS1-205ENST00000409985 IGHV3-66A0A0C4DH42 116 aa18.17■□□□□ 0.5
PMS1-205ENST00000409985 LRRC75A-AS1Q8N1F1 130 aa18.17■□□□□ 0.5
PMS1-205ENST00000409985 LINC00477Q96M19 166 aa18.17■□□□□ 0.5
PMS1-205ENST00000409985 MSRB1Q9NZV6 116 aa18.17■□□□□ 0.5
PMS1-205ENST00000409985 TEX15Q9BXT5 2789 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 IGHV4-61A0A0C4DH41 118 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 MUC21A0A0G2JKD1 596 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 MUC21A0A140T8X8 626 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 H0Y8G0 127 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 SNAI2O43623 268 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 PPIFP30405 207 aaKnown RBP18.16■□□□□ 0.5
PMS1-205ENST00000409985 MUC21Q5SSG8 566 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 BVES-AS1Q5T3Y7 98 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 PRSS57Q6UWY2 283 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 SMIM15Q7Z3B0 74 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 OR8A1Q8NGG7 326 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 A6NDX4 124 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 MPV17L2Q567V2 206 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 C16orf92Q96LL3 132 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 TIMM8BQ9Y5J9 83 aaPredicted RBP18.16■□□□□ 0.5
PMS1-205ENST00000409985 ABCA2Q9BZC7 2435 aa18.16■□□□□ 0.5
PMS1-205ENST00000409985 TRAV40A0A0B4J280 105 aa18.15■□□□□ 0.5
PMS1-205ENST00000409985 TNFRSF6BO95407 300 aa18.15■□□□□ 0.5
PMS1-205ENST00000409985 FCER1GP30273 86 aa18.15■□□□□ 0.5
PMS1-205ENST00000409985 MCRIP2Q9BUT9 160 aaKnown RBP18.15■□□□□ 0.5
PMS1-205ENST00000409985 C11orf21Q9P2W6 132 aa18.15■□□□□ 0.5
PMS1-205ENST00000409985 ZNF580Q9UK33 172 aa18.15■□□□□ 0.5
PMS1-205ENST00000409985 SMKR1H3BMG3 65 aa18.14■□□□□ 0.49
PMS1-205ENST00000409985 OVOL1O14753 267 aa18.14■□□□□ 0.49
PMS1-205ENST00000409985 NUDT3O95989 172 aa18.14■□□□□ 0.49
PMS1-205ENST00000409985 Q5PR19 223 aa18.14■□□□□ 0.49
PMS1-205ENST00000409985 CLEC2AQ6UVW9 174 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms