RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 GNG4P50150 75 aa14.96□□□□□ -0.01
VSX1-203ENST00000409285 CENPWQ5EE01 88 aa14.96□□□□□ -0.01
VSX1-203ENST00000409285 C20orf144Q9BQM9 153 aa14.96□□□□□ -0.01
VSX1-203ENST00000409285 COL7A1Q02388 2944 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 BAGE2Q86Y30 109 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 CSNK1G2-AS1Q8NCQ2 148 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 INSP01308 110 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 GPX1P07203 203 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 PRR9Q5T870 116 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 GFI1BQ5VTD9 330 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 Q6AWC8 147 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 Q6ZWC4 215 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 MRAPQ8TCY5 172 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 SMIM7Q9BQ49 75 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 LY96Q9Y6Y9 160 aa14.95□□□□□ -0.02
VSX1-203ENST00000409285 C7orf71A4D174 169 aa14.94□□□□□ -0.02
VSX1-203ENST00000409285 FXYD7P58549 80 aa14.94□□□□□ -0.02
VSX1-203ENST00000409285 ZNF674Q2M3X9 581 aa14.94□□□□□ -0.02
VSX1-203ENST00000409285 SMUG1Q53HV7 270 aa14.94□□□□□ -0.02
VSX1-203ENST00000409285 SOHLH1Q5JUK2 328 aa14.94□□□□□ -0.02
VSX1-203ENST00000409285 C8orf49Q96NF6 230 aa14.94□□□□□ -0.02
VSX1-203ENST00000409285 ASCL2Q99929 193 aa14.94□□□□□ -0.02
VSX1-203ENST00000409285 XCL2Q9UBD3 114 aa14.94□□□□□ -0.02
VSX1-203ENST00000409285 TRAV12-2A0A075B6T6 113 aa14.93□□□□□ -0.02
VSX1-203ENST00000409285 ZNF727A8MUV8 499 aa14.93□□□□□ -0.02
VSX1-203ENST00000409285 KRBOX1C9JBD0 128 aa14.93□□□□□ -0.02
VSX1-203ENST00000409285 F8W036 122 aa14.93□□□□□ -0.02
VSX1-203ENST00000409285 IGLV2-8P01709 118 aa14.93□□□□□ -0.02
VSX1-203ENST00000409285 KIR3DS1Q14943 382 aa14.93□□□□□ -0.02
VSX1-203ENST00000409285 ZC2HC1AQ96GY0 325 aa14.93□□□□□ -0.02
VSX1-203ENST00000409285 DEFB121Q5J5C9 76 aa14.92□□□□□ -0.02
VSX1-203ENST00000409285 TMEM256Q8N2U0 113 aa14.92□□□□□ -0.02
VSX1-203ENST00000409285 ZNF324O75467 553 aaPredicted RBP14.91□□□□□ -0.02
VSX1-203ENST00000409285 GCGP01275 180 aa14.91□□□□□ -0.02
VSX1-203ENST00000409285 ADCYAP1P18509 176 aa14.91□□□□□ -0.02
VSX1-203ENST00000409285 BTN1A1Q13410 526 aa14.91□□□□□ -0.02
VSX1-203ENST00000409285 TP53TG1Q9Y2A0 90 aa14.91□□□□□ -0.02
VSX1-203ENST00000409285 PFN1P07737 140 aaKnown RBP14.9□□□□□ -0.02
VSX1-203ENST00000409285 ZNF705AQ6ZN79 300 aaPredicted RBP14.9□□□□□ -0.02
VSX1-203ENST00000409285 NHLRC2Q8NBF2 726 aa14.9□□□□□ -0.02
VSX1-203ENST00000409285 SEC11CQ9BY50 192 aa14.9□□□□□ -0.02
VSX1-203ENST00000409285 TENM3Q9P273 2699 aa14.9□□□□□ -0.02
VSX1-203ENST00000409285 RBMY1A1P0DJD3 496 aaKnown RBP14.89□□□□□ -0.03
VSX1-203ENST00000409285 RBMY1CP0DJD4 496 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 RNASE4P34096 147 aaKnown RBP14.89□□□□□ -0.03
VSX1-203ENST00000409285 ZNF80P51504 273 aaPredicted RBP14.89□□□□□ -0.03
VSX1-203ENST00000409285 RBMY1FQ15415 496 aaKnown RBP14.89□□□□□ -0.03
VSX1-203ENST00000409285 NIPSNAP3BQ9BS92 247 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 BIN3Q9NQY0 253 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 TRAV12-3A0A0B4J271 114 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 TRAV21A0A0B4J279 112 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 PGPEP1LA6NFU8 196 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 J3KRW8 73 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 FAM162BQ5T6X4 162 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 C1orf158Q8N1D5 194 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 OCC1Q8TAD7 63 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 RNF183Q96D59 192 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 B9D2Q9BPU9 175 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 NAT8Q9UHE5 227 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 GOLT1BQ9Y3E0 138 aa14.89□□□□□ -0.03
VSX1-203ENST00000409285 H7BYZ3 331 aa14.88□□□□□ -0.03
VSX1-203ENST00000409285 S100A1P23297 94 aa14.88□□□□□ -0.03
VSX1-203ENST00000409285 CRIP1P50238 77 aa14.88□□□□□ -0.03
VSX1-203ENST00000409285 TMEM241Q24JQ0 296 aa14.88□□□□□ -0.03
VSX1-203ENST00000409285 DEFB135Q30KP9 77 aa14.88□□□□□ -0.03
VSX1-203ENST00000409285 LINC01551Q86U37 167 aa14.88□□□□□ -0.03
VSX1-203ENST00000409285 SBSPONQ8IVN8 264 aa14.88□□□□□ -0.03
VSX1-203ENST00000409285 RCHY1Q96PM5 261 aa14.88□□□□□ -0.03
VSX1-203ENST00000409285 TM2D3Q9BRN9 247 aa14.88□□□□□ -0.03
VSX1-203ENST00000409285 LINC00467Q9BRT7 94 aa14.88□□□□□ -0.03
VSX1-203ENST00000409285 FABP5P3A8MUU1 101 aa14.87□□□□□ -0.03
VSX1-203ENST00000409285 PYGO2Q9BRQ0 406 aa14.87□□□□□ -0.03
VSX1-203ENST00000409285 K7EN84 100 aa14.86□□□□□ -0.03
VSX1-203ENST00000409285 TDRG1Q3Y452 100 aa14.86□□□□□ -0.03
VSX1-203ENST00000409285 C10orf91Q5T1B1 145 aa14.86□□□□□ -0.03
VSX1-203ENST00000409285 CARHSP1Q9Y2V2 147 aaKnown RBP14.86□□□□□ -0.03
VSX1-203ENST00000409285 DNAH9Q9NYC9 4486 aa14.86□□□□□ -0.03
VSX1-203ENST00000409285 MGST1P10620 155 aaKnown RBP14.85□□□□□ -0.03
VSX1-203ENST00000409285 NEU1Q99519 415 aa14.85□□□□□ -0.03
VSX1-203ENST00000409285 SDF2L1Q9HCN8 221 aa14.85□□□□□ -0.03
VSX1-203ENST00000409285 C19orf71A6NCJ1 209 aa14.84□□□□□ -0.03
VSX1-203ENST00000409285 SH2D1AO60880 128 aa14.84□□□□□ -0.03
VSX1-203ENST00000409285 TGP01266 2768 aa14.84□□□□□ -0.03
VSX1-203ENST00000409285 APOC3P02656 99 aa14.84□□□□□ -0.03
VSX1-203ENST00000409285 PNRC1Q12796 327 aaPredicted RBP14.84□□□□□ -0.03
VSX1-203ENST00000409285 Q6ZQT7 251 aa14.84□□□□□ -0.03
VSX1-203ENST00000409285 SPATA25Q9BR10 227 aa14.84□□□□□ -0.03
VSX1-203ENST00000409285 TMEM208Q9BTX3 173 aa14.84□□□□□ -0.03
VSX1-203ENST00000409285 SPRY2O43597 315 aa14.83□□□□□ -0.03
VSX1-203ENST00000409285 RPL23P62829 140 aaKnown RBP14.83□□□□□ -0.03
VSX1-203ENST00000409285 OVOL2Q9BRP0 275 aa14.83□□□□□ -0.03
VSX1-203ENST00000409285 SMIM9A6NGZ8 99 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 PRR27Q6MZM9 219 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 FAM231DQ6ZW35 169 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 LINC01587Q99440 93 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 X6R8D5 127 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 IGHV1OR15-1A0A075B7D0 117 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 OR5I1Q13606 314 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 LINC01559Q495D7 138 aa14.82□□□□□ -0.04
VSX1-203ENST00000409285 FAM159AQ6UWV7 190 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms