RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 YPEL4Q96NS1 127 aa12.5□□□□□ -0.41
CGREF1-206ENST00000405600 VGLL1Q99990 258 aa12.5□□□□□ -0.41
CGREF1-206ENST00000405600 RPP21Q9H633 154 aaKnown RBP12.5□□□□□ -0.41
CGREF1-206ENST00000405600 FAM162BQ5T6X4 162 aa12.49□□□□□ -0.41
CGREF1-206ENST00000405600 TRBV7-9A0A0J9YWB2 115 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 A0A1W2PPQ1 181 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 XKRY2A2RUG3 117 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 C19orf71A6NCJ1 209 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 PRAC2D3DTV9 90 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 NPIPB6E9PJ23 425 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 OR8A1Q8NGG7 326 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 ZC2HC1AQ96GY0 325 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 C20orf173Q96LM9 149 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 PYGO2Q9BRQ0 406 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 AGPAT4-IT1Q9H0P7 198 aa12.48□□□□□ -0.41
CGREF1-206ENST00000405600 TGIF2-C20orf24A0A0A6YYL0 155 aa12.47□□□□□ -0.41
CGREF1-206ENST00000405600 OR4C46A6NHA9 309 aa12.47□□□□□ -0.41
CGREF1-206ENST00000405600 IGLV1-51P01701 117 aa12.47□□□□□ -0.41
CGREF1-206ENST00000405600 TFPI2P48307 235 aa12.47□□□□□ -0.41
CGREF1-206ENST00000405600 ERCC8Q13216 396 aa12.47□□□□□ -0.41
CGREF1-206ENST00000405600 COX19Q49B96 90 aa12.47□□□□□ -0.41
CGREF1-206ENST00000405600 EBLN2Q6P2I7 272 aa12.47□□□□□ -0.41
CGREF1-206ENST00000405600 TMA7Q9Y2S6 64 aaKnown RBP12.47□□□□□ -0.41
CGREF1-206ENST00000405600 SMIM27A0A1W2PRY6 76 aa12.46□□□□□ -0.41
CGREF1-206ENST00000405600 FAM231BA6NCW3 169 aa12.46□□□□□ -0.41
CGREF1-206ENST00000405600 FABP5P3A8MUU1 101 aa12.46□□□□□ -0.41
CGREF1-206ENST00000405600 C1orf196B1AJZ1 125 aa12.46□□□□□ -0.41
CGREF1-206ENST00000405600 DUSP14O95147 198 aaKnown RBP12.46□□□□□ -0.41
CGREF1-206ENST00000405600 RPS10P46783 165 aaKnown RBP12.46□□□□□ -0.41
CGREF1-206ENST00000405600 RPS20P60866 119 aaKnown RBP12.46□□□□□ -0.41
CGREF1-206ENST00000405600 HIST1H1AQ02539 215 aaPredicted RBP12.46□□□□□ -0.41
CGREF1-206ENST00000405600 DEFB114Q30KQ6 69 aa12.46□□□□□ -0.41
CGREF1-206ENST00000405600 ADAMTSL5Q6ZMM2 481 aa12.46□□□□□ -0.41
CGREF1-206ENST00000405600 OR2K2Q8NGT1 345 aa12.46□□□□□ -0.41
CGREF1-206ENST00000405600 TSKUQ8WUA8 353 aa12.46□□□□□ -0.41
CGREF1-206ENST00000405600 C8orf49Q96NF6 230 aa12.46□□□□□ -0.41
CGREF1-206ENST00000405600 SPAG8Q99932 426 aaPredicted RBP12.46□□□□□ -0.41
CGREF1-206ENST00000405600 GFRA4Q9GZZ7 299 aa12.46□□□□□ -0.41
CGREF1-206ENST00000405600 COL7A1Q02388 2944 aa12.45□□□□□ -0.42
CGREF1-206ENST00000405600 CXCL1P09341 107 aa12.45□□□□□ -0.42
CGREF1-206ENST00000405600 ZNF688P0C7X2 276 aa12.45□□□□□ -0.42
CGREF1-206ENST00000405600 CMC4P56277 68 aaPredicted RBP12.45□□□□□ -0.42
CGREF1-206ENST00000405600 FAM3BP58499 235 aaPredicted RBP12.45□□□□□ -0.42
CGREF1-206ENST00000405600 PSMG4Q5JS54 123 aa12.45□□□□□ -0.42
CGREF1-206ENST00000405600 OR2D3Q8NGH3 330 aa12.45□□□□□ -0.42
CGREF1-206ENST00000405600 Q8TAT8 98 aa12.45□□□□□ -0.42
CGREF1-206ENST00000405600 SAV1Q9H4B6 383 aaPredicted RBP12.45□□□□□ -0.42
CGREF1-206ENST00000405600 NAT8BQ9UHF3 227 aa12.45□□□□□ -0.42
CGREF1-206ENST00000405600 TYMSP04818 313 aa12.44□□□□□ -0.42
CGREF1-206ENST00000405600 RAB5BP61020 215 aa12.44□□□□□ -0.42
CGREF1-206ENST00000405600 TMEM61Q8N0U2 210 aa12.44□□□□□ -0.42
CGREF1-206ENST00000405600 SRD5A3Q9H8P0 318 aa12.44□□□□□ -0.42
CGREF1-206ENST00000405600 TMEM189A5PLL7 270 aa12.43□□□□□ -0.42
CGREF1-206ENST00000405600 IZUMO1RA6ND01 250 aa12.43□□□□□ -0.42
CGREF1-206ENST00000405600 SH2D1AO60880 128 aa12.43□□□□□ -0.42
CGREF1-206ENST00000405600 Q6AWC8 147 aa12.43□□□□□ -0.42
CGREF1-206ENST00000405600 SELENOKQ9Y6D0 94 aa12.43□□□□□ -0.42
CGREF1-206ENST00000405600 NHLRC4P0CG21 123 aaPredicted RBP12.42□□□□□ -0.42
CGREF1-206ENST00000405600 LINC00322Q6ZN03 302 aaPredicted RBP12.42□□□□□ -0.42
CGREF1-206ENST00000405600 FOXI2Q6ZQN5 318 aa12.42□□□□□ -0.42
CGREF1-206ENST00000405600 WWC2-AS2Q96NR7 200 aa12.42□□□□□ -0.42
CGREF1-206ENST00000405600 ODF3Q96PU9 254 aa12.42□□□□□ -0.42
CGREF1-206ENST00000405600 U3KQK5 164 aa12.42□□□□□ -0.42
CGREF1-206ENST00000405600 PRB4P10163 310 aaPredicted RBP12.41□□□□□ -0.42
CGREF1-206ENST00000405600 TSPOP30536 169 aa12.41□□□□□ -0.42
CGREF1-206ENST00000405600 LEPP41159 167 aa12.41□□□□□ -0.42
CGREF1-206ENST00000405600 CD300EQ496F6 205 aaPredicted RBP12.41□□□□□ -0.42
CGREF1-206ENST00000405600 WDR73Q6P4I2 378 aa12.41□□□□□ -0.42
CGREF1-206ENST00000405600 RASL11AQ6T310 242 aa12.41□□□□□ -0.42
CGREF1-206ENST00000405600 BORCS7Q96B45 105 aa12.41□□□□□ -0.42
CGREF1-206ENST00000405600 A0A0J9YX75 114 aa12.4□□□□□ -0.42
CGREF1-206ENST00000405600 CRISP2P16562 243 aa12.4□□□□□ -0.42
CGREF1-206ENST00000405600 CRIP1P50238 77 aa12.4□□□□□ -0.42
CGREF1-206ENST00000405600 ATP5L2Q7Z4Y8 100 aa12.4□□□□□ -0.42
CGREF1-206ENST00000405600 GTSCR1Q86UQ5 136 aa12.4□□□□□ -0.42
CGREF1-206ENST00000405600 SORL1Q92673 2214 aa12.4□□□□□ -0.43
CGREF1-206ENST00000405600 HIGD1CA8MV81 97 aa12.39□□□□□ -0.43
CGREF1-206ENST00000405600 GPX1P07203 203 aa12.39□□□□□ -0.43
CGREF1-206ENST00000405600 ZNF705DP0CH99 300 aaPredicted RBP12.39□□□□□ -0.43
CGREF1-206ENST00000405600 ZNF705BP0CI00 300 aaPredicted RBP12.39□□□□□ -0.43
CGREF1-206ENST00000405600 TCL1AP56279 114 aa12.39□□□□□ -0.43
CGREF1-206ENST00000405600 NEU1Q99519 415 aa12.39□□□□□ -0.43
CGREF1-206ENST00000405600 TRAV21A0A0B4J279 112 aa12.38□□□□□ -0.43
CGREF1-206ENST00000405600 F6UB75 175 aa12.38□□□□□ -0.43
CGREF1-206ENST00000405600 CA1P00915 261 aaPredicted RBP12.38□□□□□ -0.43
CGREF1-206ENST00000405600 ORM1P02763 201 aa12.38□□□□□ -0.43
CGREF1-206ENST00000405600 MT-ND6P03923 174 aa12.38□□□□□ -0.43
CGREF1-206ENST00000405600 S100A8P05109 93 aa12.38□□□□□ -0.43
CGREF1-206ENST00000405600 NUP35Q8NFH5 326 aa12.38□□□□□ -0.43
CGREF1-206ENST00000405600 FAM19A4Q96LR4 140 aa12.38□□□□□ -0.43
CGREF1-206ENST00000405600 DNAH9Q9NYC9 4486 aa12.38□□□□□ -0.43
CGREF1-206ENST00000405600 FRMD6-AS1P0C7T7 363 aa12.37□□□□□ -0.43
CGREF1-206ENST00000405600 FOXA3P55318 350 aaPredicted RBP12.37□□□□□ -0.43
CGREF1-206ENST00000405600 DEFB131AP59861 70 aa12.37□□□□□ -0.43
CGREF1-206ENST00000405600 LINC01559Q495D7 138 aa12.37□□□□□ -0.43
CGREF1-206ENST00000405600 APRG1Q8IVJ8 170 aa12.37□□□□□ -0.43
CGREF1-206ENST00000405600 SBSPONQ8IVN8 264 aa12.37□□□□□ -0.43
CGREF1-206ENST00000405600 TRAPPC1Q9Y5R8 145 aa12.37□□□□□ -0.43
CGREF1-206ENST00000405600 A0A1B0GW15 77 aa12.37□□□□□ -0.43
CGREF1-206ENST00000405600 ZNF80P51504 273 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms