RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 AKR1C3P42330 323 aa7.67□□□□□ -1.18
RPAIN-204ENST00000405578 ATP5G3P48201 142 aa7.67□□□□□ -1.18
RPAIN-204ENST00000405578 FLI1Q01543 452 aaPredicted RBP7.67□□□□□ -1.18
RPAIN-204ENST00000405578 MEF2BQ02080 365 aaPredicted RBP7.67□□□□□ -1.18
RPAIN-204ENST00000405578 SAPCD1Q5SSQ6 148 aa7.67□□□□□ -1.18
RPAIN-204ENST00000405578 CCDC28AQ8IWP9 274 aa7.67□□□□□ -1.18
RPAIN-204ENST00000405578 SLC7A5P1Q8MH63 180 aa7.67□□□□□ -1.18
RPAIN-204ENST00000405578 TMEM256Q8N2U0 113 aa7.67□□□□□ -1.18
RPAIN-204ENST00000405578 Q8TAT8 98 aa7.67□□□□□ -1.18
RPAIN-204ENST00000405578 FMC1Q96HJ9 113 aa7.67□□□□□ -1.18
RPAIN-204ENST00000405578 TRAV12-2A0A075B6T6 113 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 TRAV8-1A0A0A6YYK1 113 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 SMIM9A6NGZ8 99 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 H7BYZ3 331 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 J3KRW8 73 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 CRISP2P16562 243 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 RNASE4P34096 147 aaKnown RBP7.66□□□□□ -1.18
RPAIN-204ENST00000405578 IFITM2Q01629 132 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 GFI1BQ5VTD9 330 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 ZNF767PQ75MW2 155 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 PRNTQ86SH4 94 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 CSNK1G2-AS1Q8NCQ2 148 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 LYPD6BQ8NI32 183 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 LINC01587Q99440 93 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 RETNQ9HD89 108 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 TREM1Q9NP99 234 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 PSG8Q9UQ74 426 aa7.66□□□□□ -1.18
RPAIN-204ENST00000405578 TRAV12-3A0A0B4J271 114 aa7.65□□□□□ -1.18
RPAIN-204ENST00000405578 C7orf71A4D174 169 aa7.65□□□□□ -1.18
RPAIN-204ENST00000405578 RBFOX3A6NFN3 312 aa7.65□□□□□ -1.18
RPAIN-204ENST00000405578 KLLNB2CW77 178 aa7.65□□□□□ -1.18
RPAIN-204ENST00000405578 CRXO43186 299 aaPredicted RBP7.65□□□□□ -1.18
RPAIN-204ENST00000405578 MIFP14174 115 aa7.65□□□□□ -1.18
RPAIN-204ENST00000405578 RRN3P1Q2M238 152 aa7.65□□□□□ -1.18
RPAIN-204ENST00000405578 FAM19A4Q96LR4 140 aa7.65□□□□□ -1.18
RPAIN-204ENST00000405578 MUC4Q99102 2169 aa7.65□□□□□ -1.18
RPAIN-204ENST00000405578 NEU1Q99519 415 aa7.65□□□□□ -1.18
RPAIN-204ENST00000405578 EIF5A2Q9GZV4 153 aaKnown RBP7.65□□□□□ -1.18
RPAIN-204ENST00000405578 ZFP30Q9Y2G7 519 aa7.65□□□□□ -1.18
RPAIN-204ENST00000405578 HECTD4Q9Y4D8 3996 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 TRAV34A0A0B4J273 112 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 LOC102723971A0A1B0GUV8 181 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 TMEM189A5PLL7 270 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 TAS2R60P59551 318 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 TMEM183BQ1AE95 376 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 SMUG1Q53HV7 270 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 ZNF705AQ6ZN79 300 aaPredicted RBP7.64□□□□□ -1.19
RPAIN-204ENST00000405578 ZFAND2AQ8N6M9 145 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 SGK494Q96LW2 274 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 LINC00479Q96M42 142 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 KLF12Q9Y4X4 402 aa7.64□□□□□ -1.19
RPAIN-204ENST00000405578 TRAV21A0A0B4J279 112 aa7.63□□□□□ -1.19
RPAIN-204ENST00000405578 TRBV6-1A0A0K0K1D8 114 aa7.63□□□□□ -1.19
RPAIN-204ENST00000405578 SCO2A0A1W2PP80 73 aa7.63□□□□□ -1.19
RPAIN-204ENST00000405578 IGLV2-11P01706 119 aa7.63□□□□□ -1.19
RPAIN-204ENST00000405578 HTN1P15515 57 aa7.63□□□□□ -1.19
RPAIN-204ENST00000405578 BTN1A1Q13410 526 aa7.63□□□□□ -1.19
RPAIN-204ENST00000405578 C1orf158Q8N1D5 194 aa7.63□□□□□ -1.19
RPAIN-204ENST00000405578 C11orf52Q96A22 123 aa7.63□□□□□ -1.19
RPAIN-204ENST00000405578 PYGO2Q9BRQ0 406 aa7.63□□□□□ -1.19
RPAIN-204ENST00000405578 MED9Q9NWA0 146 aa7.63□□□□□ -1.19
RPAIN-204ENST00000405578 TMEM250H0YL14 139 aa7.62□□□□□ -1.19
RPAIN-204ENST00000405578 RPL35P42766 123 aaKnown RBP7.62□□□□□ -1.19
RPAIN-204ENST00000405578 KIR3DS1Q14943 382 aa7.62□□□□□ -1.19
RPAIN-204ENST00000405578 TOR2AQ5JU69 321 aa7.62□□□□□ -1.19
RPAIN-204ENST00000405578 ZNF506Q5JVG8 444 aa7.62□□□□□ -1.19
RPAIN-204ENST00000405578 FAM159AQ6UWV7 190 aa7.62□□□□□ -1.19
RPAIN-204ENST00000405578 ZNF493Q6ZR52 646 aa7.62□□□□□ -1.19
RPAIN-204ENST00000405578 Q86TA4 180 aa7.62□□□□□ -1.19
RPAIN-204ENST00000405578 BAGE2Q86Y30 109 aa7.62□□□□□ -1.19
RPAIN-204ENST00000405578 C2CD4CQ8TF44 421 aa7.62□□□□□ -1.19
RPAIN-204ENST00000405578 X6R8D5 127 aa7.62□□□□□ -1.19
RPAIN-204ENST00000405578 KMT2AQ03164 3969 aa7.61□□□□□ -1.19
RPAIN-204ENST00000405578 IGHV4-28A0A0C4DH34 117 aa7.61□□□□□ -1.19
RPAIN-204ENST00000405578 TEX48A0A1B0GUV7 120 aa7.61□□□□□ -1.19
RPAIN-204ENST00000405578 NDUFS6O75380 124 aaKnown RBP7.61□□□□□ -1.19
RPAIN-204ENST00000405578 GCGP01275 180 aa7.61□□□□□ -1.19
RPAIN-204ENST00000405578 GNG4P50150 75 aa7.61□□□□□ -1.19
RPAIN-204ENST00000405578 PEA15Q15121 130 aa7.61□□□□□ -1.19
RPAIN-204ENST00000405578 Q6AWC8 147 aa7.61□□□□□ -1.19
RPAIN-204ENST00000405578 EIF4E3Q8N5X7 224 aaKnown RBP7.61□□□□□ -1.19
RPAIN-204ENST00000405578 PCNPQ8WW12 178 aaKnown RBP7.61□□□□□ -1.19
RPAIN-204ENST00000405578 C16orf74Q96GX8 76 aa7.61□□□□□ -1.19
RPAIN-204ENST00000405578 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
RPAIN-204ENST00000405578 SMDT1Q9H4I9 107 aa7.61□□□□□ -1.19
RPAIN-204ENST00000405578 IGHV1OR15-1A0A075B7D0 117 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 A0A0J9YWU9 116 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 CBY3A6NI87 242 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 FABP5P3A8MUU1 101 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 ZNF705GA8MUZ8 300 aaPredicted RBP7.6□□□□□ -1.19
RPAIN-204ENST00000405578 ZNF324O75467 553 aaPredicted RBP7.6□□□□□ -1.19
RPAIN-204ENST00000405578 LTAP01374 205 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 PFN1P07737 140 aaKnown RBP7.6□□□□□ -1.19
RPAIN-204ENST00000405578 CEBPGP53567 150 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 CLLU1Q5K131 121 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 PRR9Q5T870 116 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 TMEM183AQ8IXX5 376 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 Q8NAQ8 132 aa7.6□□□□□ -1.19
RPAIN-204ENST00000405578 TMEM263Q8WUH6 116 aaKnown RBP7.6□□□□□ -1.19
RPAIN-204ENST00000405578 TVP23CQ96ET8 276 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms