RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 DPM2O94777 84 aa7.14□□□□□ -1.27
HPS4-203ENST00000402105 CEACAM3P40198 252 aa7.14□□□□□ -1.27
HPS4-203ENST00000402105 ARL17AQ8IVW1 177 aa7.14□□□□□ -1.27
HPS4-203ENST00000402105 LYPD1Q8N2G4 141 aa7.14□□□□□ -1.27
HPS4-203ENST00000402105 TSSC4Q9Y5U2 329 aaPredicted RBP7.14□□□□□ -1.27
HPS4-203ENST00000402105 UFSP1Q6NVU6 142 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 SCGB1D4Q6XE38 83 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 MAPKAPK5-AS1Q8N8E1 139 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 ZNF502Q8TBZ5 544 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 ZNF479Q96JC4 524 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 COL27A1Q8IZC6 1860 aaPredicted RBP7.13□□□□□ -1.27
HPS4-203ENST00000402105 B9A039 149 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 G3V318 75 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 OVOL3O00110 214 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 TMEM78Q5T7P6 136 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 AZU1P20160 251 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 ODF1Q14990 250 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 ZNF493Q6ZR52 646 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 NEGR1Q7Z3B1 354 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 TIMD4Q96H15 378 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 KAAG1Q9UBP8 84 aa7.13□□□□□ -1.27
HPS4-203ENST00000402105 WI2-2373I1.2A0A1W2PRP0 233 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.12□□□□□ -1.27
HPS4-203ENST00000402105 C3orf36Q3SXR2 165 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 ZNF562Q6V9R5 426 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 TNFRSF14Q92956 283 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 VKORC1Q9BQB6 163 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 SMAD5-AS1Q9Y6J3 95 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 NOTCH3Q9UM47 2321 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 CTSGP08311 255 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 SRSF9Q13242 221 aaKnown RBP eCLIP7.12□□□□□ -1.27
HPS4-203ENST00000402105 OR5A1Q8NGJ0 315 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 ZNF418Q8TF45 676 aaPredicted RBP7.12□□□□□ -1.27
HPS4-203ENST00000402105 AGRNO00468 2067 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 TNFRSF13BO14836 293 aaPredicted RBP7.12□□□□□ -1.27
HPS4-203ENST00000402105 SCGB2A1O75556 95 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 RPS20P60866 119 aaKnown RBP7.12□□□□□ -1.27
HPS4-203ENST00000402105 C8orf31Q8N9H6 132 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 RNF185Q96GF1 192 aa7.12□□□□□ -1.27
HPS4-203ENST00000402105 A0A1B0GWB2 263 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 MRPS12O15235 138 aaKnown RBP7.11□□□□□ -1.27
HPS4-203ENST00000402105 CEACAM4O75871 244 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 APOMO95445 188 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 FOXC1Q12948 553 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 PIP4P1Q86T03 277 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 TTC9CQ8N5M4 171 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 C16orf92Q96LL3 132 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 NXT2Q9NPJ8 142 aaKnown RBP7.11□□□□□ -1.27
HPS4-203ENST00000402105 CCL21O00585 134 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 IGF1P05019 195 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 HOXB4P17483 251 aaPredicted RBP7.11□□□□□ -1.27
HPS4-203ENST00000402105 SRD5A1P18405 259 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 C16orf54Q6UWD8 224 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 TMEM219Q86XT9 240 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 AGPAT4-IT1Q9H0P7 198 aa7.11□□□□□ -1.27
HPS4-203ENST00000402105 IGFL3Q6UXB1 125 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 C14orf178Q8N769 122 aaPredicted RBP7.1□□□□□ -1.27
HPS4-203ENST00000402105 SCGB3A1Q96QR1 104 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 PTPRQQ9UMZ3 2332 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 IGLV11-55A0A075B6I3 123 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 LINC01548A6NM66 108 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 ATP5G2Q06055 141 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 PDE6HQ13956 83 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 LAGE3Q14657 143 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 VMO1Q7Z5L0 202 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 CEND1Q8N111 149 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 C11orf21Q9P2W6 132 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 HHLA3Q9XRX5 114 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 IGKV3D-20A0A0C4DH25 116 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 H7C2G1 150 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 SIGMAR1Q99720 223 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 SORL1Q92673 2214 aa7.1□□□□□ -1.27
HPS4-203ENST00000402105 OR11H12B2RN74 326 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 INSL3P51460 131 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 TCF15Q12870 199 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 CD300EQ496F6 205 aaPredicted RBP7.09□□□□□ -1.27
HPS4-203ENST00000402105 OR11H1Q8NG94 326 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 OR11H2Q8NH07 326 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 MRPL16Q9NX20 251 aaKnown RBP7.09□□□□□ -1.27
HPS4-203ENST00000402105 U3KQK5 164 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 CACNA1AO00555 2505 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 F5H697 171 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 CLEC2AQ6UVW9 174 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 UBTD1Q9HAC8 227 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 DOPEY2Q9Y3R5 2298 aa7.09□□□□□ -1.27
HPS4-203ENST00000402105 F8W735 103 aaPredicted RBP7.09□□□□□ -1.28
HPS4-203ENST00000402105 J3QR89 54 aa7.09□□□□□ -1.28
HPS4-203ENST00000402105 IGHV3-11P01762 117 aa7.09□□□□□ -1.28
HPS4-203ENST00000402105 PSMB2P49721 201 aa7.09□□□□□ -1.28
HPS4-203ENST00000402105 C12orf74Q32Q52 190 aa7.09□□□□□ -1.28
HPS4-203ENST00000402105 ZNF292O60281 2723 aa7.08□□□□□ -1.28
HPS4-203ENST00000402105 IGLL5B9A064 214 aa7.08□□□□□ -1.28
HPS4-203ENST00000402105 ATP6V0E1O15342 81 aa7.08□□□□□ -1.28
HPS4-203ENST00000402105 ATP5LO75964 103 aa7.08□□□□□ -1.28
HPS4-203ENST00000402105 IGLC6P0CF74 106 aa7.08□□□□□ -1.28
HPS4-203ENST00000402105 RPL39LQ96EH5 51 aaKnown RBP7.08□□□□□ -1.28
HPS4-203ENST00000402105 F6UB75 175 aa7.08□□□□□ -1.28
HPS4-203ENST00000402105 SIVA1O15304 175 aa7.08□□□□□ -1.28
HPS4-203ENST00000402105 SRSF1Q07955 248 aaKnown RBP eCLIP7.08□□□□□ -1.28
HPS4-203ENST00000402105 GAGE13Q4V321 117 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms