RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 HERV-K104P61576 105 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 TMEM187Q14656 261 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 CDK5R1Q15078 307 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 CEND1Q8N111 149 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 NUP37Q8NFH4 326 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 EMC6Q9BV81 110 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 CKLFQ9UBR5 152 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 RPUSD1Q9UJJ7 312 aaKnown RBP4.81□□□□□ -1.64
CLIP4-202ENST00000401605 PCNX3Q9H6A9 2034 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 CADP27708 2225 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 LY6HO94772 140 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 HLA-DQA1P01909 254 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 APOHP02749 345 aaPredicted RBP4.81□□□□□ -1.64
CLIP4-202ENST00000401605 IGHV4-31P0DP07 118 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 AQP1P29972 269 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 PSMG4Q5JS54 123 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 FAM19A2Q8N3H0 131 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 TMEM158Q8WZ71 300 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 F11RQ9Y624 299 aaKnown RBP4.81□□□□□ -1.64
CLIP4-202ENST00000401605 PRR14LQ5THK1 2151 aa4.81□□□□□ -1.64
CLIP4-202ENST00000401605 TEX50A0A1B0GTY4 177 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 SRRM4A7MD48 611 aaKnown RBP4.8□□□□□ -1.64
CLIP4-202ENST00000401605 CD7P09564 240 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 CRYBA2P53672 197 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 C12orf74Q32Q52 190 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 SP6Q3SY56 376 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 Q6ZQT7 251 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 AMN1Q8IY45 258 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 LINC01561Q8N1V8 128 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 LINC00311Q8N616 119 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 ZNF645Q8N7E2 425 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 PHLDA1Q8WV24 401 aaPredicted RBP4.8□□□□□ -1.64
CLIP4-202ENST00000401605 FAM19A4Q96LR4 140 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 ZNF665Q9H7R5 613 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 SONP18583 2426 aaKnown RBP4.8□□□□□ -1.64
CLIP4-202ENST00000401605 ATRQ13535 2644 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 ZANQ9Y493 2812 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 TRAV8-2A0A0B4J237 113 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 FAM240AA0A1B0GVK7 77 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 A8MWV9 139 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 BGLAPP02818 100 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 OR5AL1P0C617 328 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 HLA-DRB4P13762 266 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 HLA-DOBP13765 273 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 CFPP27918 469 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 UBE2E1P51965 193 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 ZC2HC1BQ5TFG8 222 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 ZNF627Q7L945 461 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 MDP1Q86V88 176 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 C15orf53Q8NAA6 179 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 UBE2E2Q96LR5 201 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 SHANK2-AS3Q9BTD1 123 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 BPESC1Q9GZL8 116 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 DYNLRB1Q9NP97 96 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 IL36BQ9NZH7 164 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 RNF7Q9UBF6 113 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 ZNF256Q9Y2P7 627 aaPredicted RBP4.8□□□□□ -1.64
CLIP4-202ENST00000401605 HLA-DRB4X5D2U9 266 aa4.8□□□□□ -1.64
CLIP4-202ENST00000401605 IGHV4-61A0A0C4DH41 118 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 NDUFC2-KCTD14E9PQ53 114 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 HLA-DMBP28068 263 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 ZNF493Q6ZR52 646 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 OR2T6Q8NHC8 308 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 C11orf45Q8TAV5 145 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 MYOZ3Q8TDC0 251 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 H1FXQ92522 213 aaKnown RBP4.79□□□□□ -1.64
CLIP4-202ENST00000401605 HIGD1BQ9P298 99 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 ABCA1O95477 2261 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 NUP214P35658 2090 aaPredicted RBP4.79□□□□□ -1.64
CLIP4-202ENST00000401605 TRAV12-2A0A075B6T6 113 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 TRAV2A0A0B4J234 112 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 ZNF503-AS2A6NEH8 195 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 NXPH3O95157 252 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 NDUFB2O95178 105 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 RNASE1P07998 156 aaKnown RBP4.79□□□□□ -1.64
CLIP4-202ENST00000401605 ASAH2BP0C7U1 165 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 SCGB1C2P0DMR2 95 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 ARFRP1Q13795 201 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 Q6ZRU5 148 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 Q6ZS49 121 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 GTSCR1Q86UQ5 136 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 OR10AC1Q8NH08 325 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 FMC1Q96HJ9 113 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 WFDC6Q9BQY6 131 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 FREM1Q5H8C1 2179 aa4.79□□□□□ -1.64
CLIP4-202ENST00000401605 TRAV8-1A0A0A6YYK1 113 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 BMPR1BO00238 502 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 FXYD6P3P58550 94 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 KLF5Q13887 457 aaPredicted RBP4.78□□□□□ -1.64
CLIP4-202ENST00000401605 RTL8BQ17RB0 113 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 Q6ZRM9 215 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 TRAPPC6BQ86SZ2 158 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 SBSPONQ8IVN8 264 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 FGFBP3Q8TAT2 258 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 COPS9Q8WXC6 57 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 RTL8AQ9BWD3 113 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 STAB1Q9NY15 2570 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 COL6A5A8TX70 2615 aa4.78□□□□□ -1.64
CLIP4-202ENST00000401605 IGHV1-24A0A0C4DH33 117 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms