RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TMEM183BQ1AE95 376 aa11.55□□□□□ -0.56
HMGA1-204ENST00000401473 TP53TG1Q9Y2A0 90 aa11.55□□□□□ -0.56
HMGA1-204ENST00000401473 IGHV3OR16-12A0A075B7B8 117 aa11.55□□□□□ -0.56
HMGA1-204ENST00000401473 OR11H2Q8NH07 326 aa11.55□□□□□ -0.56
HMGA1-204ENST00000401473 FMC1Q96HJ9 113 aa11.55□□□□□ -0.56
HMGA1-204ENST00000401473 ZMAT4Q9H898 229 aa11.55□□□□□ -0.56
HMGA1-204ENST00000401473 X6R8D5 127 aa11.55□□□□□ -0.56
HMGA1-204ENST00000401473 C9JQL5 133 aa11.54□□□□□ -0.56
HMGA1-204ENST00000401473 AKR1C3P42330 323 aa11.54□□□□□ -0.56
HMGA1-204ENST00000401473 RPL35P42766 123 aaKnown RBP11.54□□□□□ -0.56
HMGA1-204ENST00000401473 MED9Q9NWA0 146 aa11.54□□□□□ -0.56
HMGA1-204ENST00000401473 C7orf71A4D174 169 aa11.53□□□□□ -0.56
HMGA1-204ENST00000401473 RGS13O14921 159 aa11.53□□□□□ -0.56
HMGA1-204ENST00000401473 INSP01308 110 aa11.53□□□□□ -0.56
HMGA1-204ENST00000401473 ZNF80P51504 273 aaPredicted RBP11.53□□□□□ -0.56
HMGA1-204ENST00000401473 UBE2G1P62253 170 aa11.53□□□□□ -0.56
HMGA1-204ENST00000401473 Q86TA4 180 aa11.53□□□□□ -0.56
HMGA1-204ENST00000401473 FBLL1A6NHQ2 334 aaKnown RBP11.53□□□□□ -0.56
HMGA1-204ENST00000401473 LTAP01374 205 aa11.53□□□□□ -0.56
HMGA1-204ENST00000401473 TRBV20OR9-2A0A075B6H5 130 aa11.52□□□□□ -0.57
HMGA1-204ENST00000401473 TRBV6-1A0A0K0K1D8 114 aa11.52□□□□□ -0.57
HMGA1-204ENST00000401473 RAB19A4D1S5 217 aa11.52□□□□□ -0.57
HMGA1-204ENST00000401473 SAPCD1Q5SSQ6 148 aa11.52□□□□□ -0.57
HMGA1-204ENST00000401473 MLST8Q9BVC4 326 aa11.52□□□□□ -0.57
HMGA1-204ENST00000401473 ZFP30Q9Y2G7 519 aa11.52□□□□□ -0.57
HMGA1-204ENST00000401473 TMEM250H0YL14 139 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 ATP6V1G1O75348 118 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 CRIP1P50238 77 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 Q6AWC8 147 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 NHLRC2Q8NBF2 726 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 LINC01587Q99440 93 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 TMEM208Q9BTX3 173 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 GCGP01275 180 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 S100A9P06702 114 aaKnown RBP11.51□□□□□ -0.57
HMGA1-204ENST00000401473 SRP19P09132 144 aaKnown RBP11.51□□□□□ -0.57
HMGA1-204ENST00000401473 HTN1P15515 57 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 AZU1P20160 251 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 COX8CQ7Z4L0 72 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 BAGE2Q86Y30 109 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 C20orf144Q9BQM9 153 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 NDFIP1Q9BT67 221 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 GOLT1BQ9Y3E0 138 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 U3KQK5 164 aa11.51□□□□□ -0.57
HMGA1-204ENST00000401473 ZNF705GA8MUZ8 300 aaPredicted RBP11.5□□□□□ -0.57
HMGA1-204ENST00000401473 IGLV2-8P01709 118 aa11.5□□□□□ -0.57
HMGA1-204ENST00000401473 TAS2R60P59551 318 aa11.5□□□□□ -0.57
HMGA1-204ENST00000401473 Q8NAQ8 132 aa11.5□□□□□ -0.57
HMGA1-204ENST00000401473 DNAH7Q8WXX0 4024 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 PGPEP1LA6NFU8 196 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 H7BYZ3 331 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 DEFB4AO15263 64 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 TMEM183AQ8IXX5 376 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 TMEM256Q8N2U0 113 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 NEU1Q99519 415 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 NIPSNAP3BQ9BS92 247 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 PARLQ9H300 379 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 CSMD3Q7Z407 3707 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 CEBPGP53567 150 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 CENPWQ5EE01 88 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 C11orf21Q9P2W6 132 aa11.49□□□□□ -0.57
HMGA1-204ENST00000401473 NDUFS6O75380 124 aaKnown RBP11.48□□□□□ -0.57
HMGA1-204ENST00000401473 PEA15Q15121 130 aa11.48□□□□□ -0.57
HMGA1-204ENST00000401473 IGHV4-28A0A0C4DH34 117 aa11.47□□□□□ -0.57
HMGA1-204ENST00000401473 PFN1P07737 140 aaKnown RBP11.47□□□□□ -0.57
HMGA1-204ENST00000401473 ZNF674Q2M3X9 581 aa11.47□□□□□ -0.57
HMGA1-204ENST00000401473 MUC21Q5SSG8 566 aa11.47□□□□□ -0.57
HMGA1-204ENST00000401473 PYGO2Q9BRQ0 406 aa11.47□□□□□ -0.57
HMGA1-204ENST00000401473 TP53TG3Q9ULZ0 132 aa11.47□□□□□ -0.57
HMGA1-204ENST00000401473 TRAV21A0A0B4J279 112 aa11.46□□□□□ -0.57
HMGA1-204ENST00000401473 MIFP14174 115 aa11.46□□□□□ -0.57
HMGA1-204ENST00000401473 SMDT1Q9H4I9 107 aa11.46□□□□□ -0.57
HMGA1-204ENST00000401473 A0A0J9YWU9 116 aa11.46□□□□□ -0.58
HMGA1-204ENST00000401473 SMIM9A6NGZ8 99 aa11.46□□□□□ -0.58
HMGA1-204ENST00000401473 GNG4P50150 75 aa11.46□□□□□ -0.58
HMGA1-204ENST00000401473 RRN3P1Q2M238 152 aa11.46□□□□□ -0.58
HMGA1-204ENST00000401473 ZNF575Q86XF7 245 aa11.46□□□□□ -0.58
HMGA1-204ENST00000401473 IGHV1OR15-1A0A075B7D0 117 aa11.45□□□□□ -0.58
HMGA1-204ENST00000401473 PLAC8L1A1L4L8 177 aa11.45□□□□□ -0.58
HMGA1-204ENST00000401473 FABP5P3A8MUU1 101 aa11.45□□□□□ -0.58
HMGA1-204ENST00000401473 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
HMGA1-204ENST00000401473 ANXA2RQ3ZCQ2 193 aa11.44□□□□□ -0.58
HMGA1-204ENST00000401473 RNASE8Q8TDE3 154 aaKnown RBP11.44□□□□□ -0.58
HMGA1-204ENST00000401473 LINC00467Q9BRT7 94 aa11.44□□□□□ -0.58
HMGA1-204ENST00000401473 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
HMGA1-204ENST00000401473 C9JCJ5 164 aa11.44□□□□□ -0.58
HMGA1-204ENST00000401473 GNRH2O43555 120 aa11.44□□□□□ -0.58
HMGA1-204ENST00000401473 TDRG1Q3Y452 100 aa11.44□□□□□ -0.58
HMGA1-204ENST00000401473 SMIM7Q9BQ49 75 aa11.44□□□□□ -0.58
HMGA1-204ENST00000401473 EDA2RQ9HAV5 297 aa11.44□□□□□ -0.58
HMGA1-204ENST00000401473 NAGKQ9UJ70 344 aa11.44□□□□□ -0.58
HMGA1-204ENST00000401473 K7EN84 100 aa11.43□□□□□ -0.58
HMGA1-204ENST00000401473 SH2D1AO60880 128 aa11.43□□□□□ -0.58
HMGA1-204ENST00000401473 EMP1P54849 157 aa11.43□□□□□ -0.58
HMGA1-204ENST00000401473 OR5I1Q13606 314 aa11.43□□□□□ -0.58
HMGA1-204ENST00000401473 FAM162BQ5T6X4 162 aa11.43□□□□□ -0.58
HMGA1-204ENST00000401473 PRR27Q6MZM9 219 aa11.43□□□□□ -0.58
HMGA1-204ENST00000401473 FAM159AQ6UWV7 190 aa11.43□□□□□ -0.58
HMGA1-204ENST00000401473 EIF4E3Q8N5X7 224 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms