RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SIGLEC9Q9Y336 463 aa7.88□□□□□ -1.15
PTPRM-203ENST00000400060 EFNA4P52798 201 aa7.88□□□□□ -1.15
PTPRM-203ENST00000400060 FOXG1P55316 489 aaPredicted RBP7.88□□□□□ -1.15
PTPRM-203ENST00000400060 ECSCRQ19T08 205 aa7.88□□□□□ -1.15
PTPRM-203ENST00000400060 FAM216BQ8N7L0 139 aa7.88□□□□□ -1.15
PTPRM-203ENST00000400060 CDIP1Q9H305 208 aa7.88□□□□□ -1.15
PTPRM-203ENST00000400060 IGKV1D-17A0A075B6S4 117 aa7.88□□□□□ -1.15
PTPRM-203ENST00000400060 SRRM4A7MD48 611 aaKnown RBP7.88□□□□□ -1.15
PTPRM-203ENST00000400060 NDUFC2-KCTD14E9PQ53 114 aa7.88□□□□□ -1.15
PTPRM-203ENST00000400060 RNASE4P34096 147 aaKnown RBP7.88□□□□□ -1.15
PTPRM-203ENST00000400060 UCNP55089 124 aa7.88□□□□□ -1.15
PTPRM-203ENST00000400060 ATP5EP2Q5VTU8 51 aa7.88□□□□□ -1.15
PTPRM-203ENST00000400060 DYNLRB2Q8TF09 96 aa7.88□□□□□ -1.15
PTPRM-203ENST00000400060 EIF4EBP1Q13541 118 aaPredicted RBP7.87□□□□□ -1.15
PTPRM-203ENST00000400060 METRNQ9UJH8 293 aa7.87□□□□□ -1.15
PTPRM-203ENST00000400060 LENEPQ9Y5L5 61 aa7.87□□□□□ -1.15
PTPRM-203ENST00000400060 TRAV4A0A0B4J268 109 aa7.87□□□□□ -1.15
PTPRM-203ENST00000400060 SDHAF1A6NFY7 115 aa7.87□□□□□ -1.15
PTPRM-203ENST00000400060 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
PTPRM-203ENST00000400060 LINC00205P59089 165 aa7.87□□□□□ -1.15
PTPRM-203ENST00000400060 PATE2Q6UY27 113 aa7.87□□□□□ -1.15
PTPRM-203ENST00000400060 LRRK1Q38SD2 2015 aa7.87□□□□□ -1.15
PTPRM-203ENST00000400060 TIMM17AQ99595 171 aa7.87□□□□□ -1.15
PTPRM-203ENST00000400060 DPM3Q9P2X0 92 aa7.87□□□□□ -1.15
PTPRM-203ENST00000400060 VWC2LB2RUY7 222 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 CACNA1EQ15878 2313 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 ANAPC1Q9H1A4 1944 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 ASXL3Q9C0F0 2248 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 IGLC6P0CF74 106 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 RBM3P98179 157 aaKnown RBP7.86□□□□□ -1.15
PTPRM-203ENST00000400060 C10orf55Q5SWW7 151 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 Q8TAT8 98 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 URB1-AS1Q96HZ7 61 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 ZNF71Q9NQZ8 489 aaPredicted RBP7.86□□□□□ -1.15
PTPRM-203ENST00000400060 NDUFA12Q9UI09 145 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 MRPS36P82909 103 aaKnown RBP7.86□□□□□ -1.15
PTPRM-203ENST00000400060 SIGLEC15Q6ZMC9 328 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 FAM236DA0A1B0GTK5 79 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 FAM236CP0DP71 79 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 INSL3P51460 131 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 MUSTN1Q8IVN3 82 aa7.86□□□□□ -1.15
PTPRM-203ENST00000400060 WISP1O95388 367 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 MED14OSP0DP75 135 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 EGR2P11161 476 aaPredicted RBP7.85□□□□□ -1.15
PTPRM-203ENST00000400060 ATP5J2P56134 94 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 WDR86Q86TI4 376 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 SERP2Q8N6R1 65 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 BAALCQ8WXS3 180 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 TTTY13Q9BZ97 58 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 IGKV1-16P04430 117 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 MYCNOSP40205 109 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 C17orf58Q2M2W7 97 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 C14orf178Q8N769 122 aaPredicted RBP7.85□□□□□ -1.15
PTPRM-203ENST00000400060 GAFA1Q96PS6 74 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 MDFICQ9P1T7 246 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 IGHV3-64A0A075B6Q5 118 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 SNRPD3P62318 126 aaKnown RBP7.85□□□□□ -1.15
PTPRM-203ENST00000400060 WT1-ASQ06250 92 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 SLC25A29Q8N8R3 303 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 ZMAT4Q9H898 229 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 Q6ZPA2 131 aa7.85□□□□□ -1.15
PTPRM-203ENST00000400060 UBE2D3P61077 147 aa7.84□□□□□ -1.15
PTPRM-203ENST00000400060 UBE2D2P62837 147 aa7.84□□□□□ -1.15
PTPRM-203ENST00000400060 DOCK8Q8NF50 2099 aa7.84□□□□□ -1.15
PTPRM-203ENST00000400060 I3L3M4 83 aa7.84□□□□□ -1.15
PTPRM-203ENST00000400060 TMEM86BQ8N661 226 aa7.84□□□□□ -1.15
PTPRM-203ENST00000400060 IGHV1-69P01742 117 aa7.84□□□□□ -1.15
PTPRM-203ENST00000400060 DNAJC13O75165 2243 aa7.84□□□□□ -1.16
PTPRM-203ENST00000400060 CRYGBP07316 175 aa7.84□□□□□ -1.16
PTPRM-203ENST00000400060 FAM19A5Q7Z5A7 132 aaPredicted RBP7.84□□□□□ -1.16
PTPRM-203ENST00000400060 FGF23Q9GZV9 251 aaPredicted RBP7.83□□□□□ -1.16
PTPRM-203ENST00000400060 IGKV2D-26A0A0A0MRZ7 120 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 OOSP1A8MZH6 123 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 H0YGX0 51 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 LOXL1Q08397 574 aaPredicted RBP7.83□□□□□ -1.16
PTPRM-203ENST00000400060 ERCC8Q13216 396 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 ATP1A1-AS1Q5TC04 95 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 ASPHD1Q5U4P2 390 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 ZFP2Q6ZN57 461 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 H3BQ85 93 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 FDCSPQ8NFU4 85 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 RTTNQ86VV8 2226 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 GATA4P43694 442 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 Q8N7P7 452 aa7.83□□□□□ -1.16
PTPRM-203ENST00000400060 TRBV7-7A0A0K0K1E9 115 aa7.82□□□□□ -1.16
PTPRM-203ENST00000400060 TEX36Q5VZQ5 186 aa7.82□□□□□ -1.16
PTPRM-203ENST00000400060 CACNA1DQ01668 2161 aa7.82□□□□□ -1.16
PTPRM-203ENST00000400060 IGHV1-3A0A0C4DH29 117 aa7.82□□□□□ -1.16
PTPRM-203ENST00000400060 RPL18AQ02543 176 aaKnown RBP7.82□□□□□ -1.16
PTPRM-203ENST00000400060 C3orf36Q3SXR2 165 aa7.82□□□□□ -1.16
PTPRM-203ENST00000400060 NEXN-AS1Q8NBZ9 246 aa7.82□□□□□ -1.16
PTPRM-203ENST00000400060 TEX49A0A1B0GTD5 131 aa7.81□□□□□ -1.16
PTPRM-203ENST00000400060 NDUFC1O43677 76 aa7.81□□□□□ -1.16
PTPRM-203ENST00000400060 C3orf56Q8N813 242 aa7.81□□□□□ -1.16
PTPRM-203ENST00000400060 TFF1P04155 84 aa7.81□□□□□ -1.16
PTPRM-203ENST00000400060 CCL3L1P16619 93 aa7.81□□□□□ -1.16
PTPRM-203ENST00000400060 PHLDA1Q8WV24 401 aaPredicted RBP7.81□□□□□ -1.16
PTPRM-203ENST00000400060 RNASE1P07998 156 aaKnown RBP7.81□□□□□ -1.16
PTPRM-203ENST00000400060 IGHV1-8P0DP01 117 aa7.81□□□□□ -1.16
PTPRM-203ENST00000400060 DTX1Q86Y01 620 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms