RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 OR11H1Q8NG94 326 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 AJUBAQ96IF1 538 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 LOC102724200A0A096LPH7 203 aaPredicted RBP10.9□□□□□ -0.66
SCAF4-202ENST00000399804 TCF21O43680 179 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 CACNG7P62955 275 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 DMRTA1Q5VZB9 504 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 C18orf32Q8TCD1 76 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 AGPAT4-IT1Q9H0P7 198 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 C7orf71A4D174 169 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 DEFB131AP59861 70 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 Q0VG73 95 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 TCTEX1D4Q5JR98 221 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 CHCHD1Q96BP2 118 aaKnown RBP10.9□□□□□ -0.66
SCAF4-202ENST00000399804 C1orf159Q96HA4 380 aa10.9□□□□□ -0.66
SCAF4-202ENST00000399804 SAP30O75446 220 aa10.89□□□□□ -0.67
SCAF4-202ENST00000399804 SCGB1D4Q6XE38 83 aa10.89□□□□□ -0.67
SCAF4-202ENST00000399804 OR1N2Q8NGR9 330 aa10.89□□□□□ -0.67
SCAF4-202ENST00000399804 IGF2BP2-AS1Q96M15 143 aa10.89□□□□□ -0.67
SCAF4-202ENST00000399804 F6UB75 175 aa10.89□□□□□ -0.67
SCAF4-202ENST00000399804 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
SCAF4-202ENST00000399804 SLC25A34Q6PIV7 304 aa10.89□□□□□ -0.67
SCAF4-202ENST00000399804 SMPXQ9UHP9 88 aa10.89□□□□□ -0.67
SCAF4-202ENST00000399804 ZNF256Q9Y2P7 627 aaPredicted RBP10.89□□□□□ -0.67
SCAF4-202ENST00000399804 A6NDX4 124 aa10.89□□□□□ -0.67
SCAF4-202ENST00000399804 PPP1R17O96001 155 aa10.89□□□□□ -0.67
SCAF4-202ENST00000399804 C14orf178Q8N769 122 aaPredicted RBP10.88□□□□□ -0.67
SCAF4-202ENST00000399804 NXT2Q9NPJ8 142 aaKnown RBP10.88□□□□□ -0.67
SCAF4-202ENST00000399804 HBDP02042 147 aa10.88□□□□□ -0.67
SCAF4-202ENST00000399804 IGLC2P0DOY2 106 aa10.88□□□□□ -0.67
SCAF4-202ENST00000399804 DEFB136Q30KP8 78 aa10.88□□□□□ -0.67
SCAF4-202ENST00000399804 HIST2H2BCQ6DN03 193 aa10.88□□□□□ -0.67
SCAF4-202ENST00000399804 MEGF9Q9H1U4 602 aa10.88□□□□□ -0.67
SCAF4-202ENST00000399804 TMEM160Q9NX00 188 aa10.88□□□□□ -0.67
SCAF4-202ENST00000399804 ANKRD17O75179 2603 aaKnown RBP10.87□□□□□ -0.67
SCAF4-202ENST00000399804 C3orf79P0CE67 100 aa10.87□□□□□ -0.67
SCAF4-202ENST00000399804 NPIPB6E9PJ23 425 aa10.87□□□□□ -0.67
SCAF4-202ENST00000399804 TRBV12-3P01733 135 aa10.87□□□□□ -0.67
SCAF4-202ENST00000399804 NPSP0C0P6 89 aa10.87□□□□□ -0.67
SCAF4-202ENST00000399804 HERVK_113P61574 105 aa10.87□□□□□ -0.67
SCAF4-202ENST00000399804 KLF12Q9Y4X4 402 aa10.87□□□□□ -0.67
SCAF4-202ENST00000399804 LINC01619G3V211 115 aa10.87□□□□□ -0.67
SCAF4-202ENST00000399804 LOXL1Q08397 574 aaPredicted RBP10.87□□□□□ -0.67
SCAF4-202ENST00000399804 SCGB3A1Q96QR1 104 aa10.87□□□□□ -0.67
SCAF4-202ENST00000399804 FOXC2Q99958 501 aa10.87□□□□□ -0.67
SCAF4-202ENST00000399804 SNAI2O43623 268 aa10.86□□□□□ -0.67
SCAF4-202ENST00000399804 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
SCAF4-202ENST00000399804 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
SCAF4-202ENST00000399804 ZNF48Q96MX3 618 aaPredicted RBP10.86□□□□□ -0.67
SCAF4-202ENST00000399804 ATP5LO75964 103 aa10.86□□□□□ -0.67
SCAF4-202ENST00000399804 EGR2P11161 476 aaPredicted RBP10.86□□□□□ -0.67
SCAF4-202ENST00000399804 DEFB104AQ8WTQ1 72 aa10.86□□□□□ -0.67
SCAF4-202ENST00000399804 ALKBH7Q9BT30 221 aaPredicted RBP10.86□□□□□ -0.67
SCAF4-202ENST00000399804 HOXD3P31249 432 aaPredicted RBP10.86□□□□□ -0.67
SCAF4-202ENST00000399804 DNLZQ5SXM8 178 aa10.86□□□□□ -0.67
SCAF4-202ENST00000399804 CCDC140Q96MF4 163 aa10.86□□□□□ -0.67
SCAF4-202ENST00000399804 PRAC2D3DTV9 90 aa10.86□□□□□ -0.67
SCAF4-202ENST00000399804 UNQ9165/PRO28630Q6UXU0 137 aa10.86□□□□□ -0.67
SCAF4-202ENST00000399804 TNFRSF18Q9Y5U5 241 aa10.86□□□□□ -0.67
SCAF4-202ENST00000399804 H7C1H1 209 aa10.85□□□□□ -0.67
SCAF4-202ENST00000399804 FAM104BQ5XKR9 115 aa10.85□□□□□ -0.67
SCAF4-202ENST00000399804 Q8N6K4 173 aa10.85□□□□□ -0.67
SCAF4-202ENST00000399804 IFI27P40305 119 aaPredicted RBP10.85□□□□□ -0.67
SCAF4-202ENST00000399804 RNF151Q2KHN1 245 aa10.85□□□□□ -0.67
SCAF4-202ENST00000399804 PCP4P48539 62 aa10.84□□□□□ -0.67
SCAF4-202ENST00000399804 EMP1P54849 157 aa10.84□□□□□ -0.67
SCAF4-202ENST00000399804 IFI27L1Q96BM0 104 aa10.84□□□□□ -0.67
SCAF4-202ENST00000399804 ST20Q9HBF5 79 aa10.84□□□□□ -0.67
SCAF4-202ENST00000399804 Q6ZWC4 215 aa10.84□□□□□ -0.67
SCAF4-202ENST00000399804 MCRIP2Q9BUT9 160 aaKnown RBP10.84□□□□□ -0.67
SCAF4-202ENST00000399804 TRGV11A0A075B6L2 103 aa10.84□□□□□ -0.67
SCAF4-202ENST00000399804 TRAV12-2A0A075B6T6 113 aa10.84□□□□□ -0.67
SCAF4-202ENST00000399804 SRSF1Q07955 248 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCAF4-202ENST00000399804 COL5A1-AS1Q5SY13 56 aa10.84□□□□□ -0.67
SCAF4-202ENST00000399804 RAI1Q7Z5J4 1906 aaPredicted RBP10.84□□□□□ -0.67
SCAF4-202ENST00000399804 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.83□□□□□ -0.68
SCAF4-202ENST00000399804 LGALS1P09382 135 aaKnown RBP10.83□□□□□ -0.68
SCAF4-202ENST00000399804 FOXE3Q13461 319 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 COA6Q5JTJ3 125 aaKnown RBP10.83□□□□□ -0.68
SCAF4-202ENST00000399804 CBY1Q9Y3M2 126 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 DLEU1O43261 78 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 SRSF9Q13242 221 aaKnown RBP eCLIP10.83□□□□□ -0.68
SCAF4-202ENST00000399804 ANXA2RQ3ZCQ2 193 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 C16orf54Q6UWD8 224 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 ERASQ7Z444 233 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 WFDC11Q8NEX6 87 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 NACAE9PAV3 2078 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 TRAV9-2A0A087WT02 112 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 PET117Q6UWS5 81 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 UBE2E2Q96LR5 201 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 BBC3Q96PG8 261 aaPredicted RBP10.83□□□□□ -0.68
SCAF4-202ENST00000399804 RCHY1Q96PM5 261 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 MIEN1Q9BRT3 115 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 DPH3P1Q9H4G8 78 aa10.83□□□□□ -0.68
SCAF4-202ENST00000399804 PRSS57Q6UWY2 283 aa10.82□□□□□ -0.68
SCAF4-202ENST00000399804 A0A087WWL8 130 aa10.82□□□□□ -0.68
SCAF4-202ENST00000399804 OR11H12B2RN74 326 aa10.82□□□□□ -0.68
SCAF4-202ENST00000399804 IGLV2-8P01709 118 aa10.82□□□□□ -0.68
SCAF4-202ENST00000399804 TRAV8-6A0A0B4J262 113 aa10.82□□□□□ -0.68
SCAF4-202ENST00000399804 DEFB1P60022 68 aa10.82□□□□□ -0.68
SCAF4-202ENST00000399804 IGHV4-31P0DP07 118 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms