RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 SMCHD1A6NHR9 2005 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 USP17L23D6RBM5 183 aa10.02□□□□□ -0.8
CACNA1C-209ENST00000399603 LY96Q9Y6Y9 160 aa10.02□□□□□ -0.8
CACNA1C-209ENST00000399603 PKDREJQ9NTG1 2253 aa10.02□□□□□ -0.8
CACNA1C-209ENST00000399603 IGHV1-18A0A0C4DH31 117 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 IGKV1-9A0A0C4DH69 117 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 WDR86Q86TI4 376 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 DEFB125Q8N687 156 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 TRAV1-1A0A0B4J248 108 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 FAM223BA6NKX1 122 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 WISP1O95388 367 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 GNLYP22749 145 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 FAM223AQ8IWN6 122 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 TM2D2Q9BX73 214 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 TMEM61Q8N0U2 210 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 PRR15LQ9BU68 103 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 LGALS9BQ3B8N2 356 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 LGALS9CQ6DKI2 356 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 HIST2H2BCQ6DN03 193 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 CYYR1Q96J86 154 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 CAMK2N2Q96S95 79 aa10.02□□□□□ -0.81
CACNA1C-209ENST00000399603 ARTNQ5T4W7 220 aa10.01□□□□□ -0.81
CACNA1C-209ENST00000399603 H0YJW9 148 aa10.01□□□□□ -0.81
CACNA1C-209ENST00000399603 CD59P13987 128 aa10.01□□□□□ -0.81
CACNA1C-209ENST00000399603 COL11A1P12107 1806 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-209ENST00000399603 OPRPNQ99935 248 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-209ENST00000399603 IGLV3-12A0A075B6K2 115 aa10.01□□□□□ -0.81
CACNA1C-209ENST00000399603 A0A1B0GW64 132 aa10□□□□□ -0.81
CACNA1C-209ENST00000399603 MYOFQ9NZM1 2061 aa10□□□□□ -0.81
CACNA1C-209ENST00000399603 G3V4G9 280 aa10□□□□□ -0.81
CACNA1C-209ENST00000399603 PAQR4Q8N4S7 273 aaPredicted RBP10□□□□□ -0.81
CACNA1C-209ENST00000399603 SCN5AQ14524 2016 aa10□□□□□ -0.81
CACNA1C-209ENST00000399603 PLXNB2O15031 1838 aa10□□□□□ -0.81
CACNA1C-209ENST00000399603 DAND5Q8N907 189 aa10□□□□□ -0.81
CACNA1C-209ENST00000399603 ZFP36L1Q07352 338 aaKnown RBP10□□□□□ -0.81
CACNA1C-209ENST00000399603 PCP2Q8IVA1 136 aa10□□□□□ -0.81
CACNA1C-209ENST00000399603 SLC25A29Q8N8R3 303 aa10□□□□□ -0.81
CACNA1C-209ENST00000399603 TMEM75Q8N9X5 138 aa10□□□□□ -0.81
CACNA1C-209ENST00000399603 A6NED7 52 aa10□□□□□ -0.81
CACNA1C-209ENST00000399603 TEN1Q86WV5 123 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 MAPK1IP1LQ8NDC0 245 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 MST1LQ2TV78 715 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 BUB1B-PAK6H3BSN5 160 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 NDUFS7O75251 213 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 NPBQ8NG41 125 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 SND1-IT1Q9HBX3 110 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 ICOSQ9Y6W8 199 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 RGPD4Q7Z3J3 1758 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 IGKV2D-26A0A0A0MRZ7 120 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 APOC4P55056 127 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 RUSC1-AS1Q66K80 236 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 SHANK2-AS3Q9BTD1 123 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 KIF26BQ2KJY2 2108 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 C17orf77Q96MU5 243 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 NOP10Q9NPE3 64 aaKnown RBP9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 EFNA2O43921 213 aa9.99□□□□□ -0.81
CACNA1C-209ENST00000399603 LY6HO94772 140 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 WDR90Q96KV7 1748 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 LINC00473A8K010 186 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 IGHV3-30P01768 117 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 IGHV3-33P01772 117 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 IGHV3-30-5P0DP03 117 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 LTBP1Q14766 1721 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 HOXB4P17483 251 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 TEX36Q5VZQ5 186 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 PLA2G2AP14555 144 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 MST1P26927 711 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 LOXL1Q08397 574 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 REG4Q9BYZ8 158 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 B4DSR2 109 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 LINC01619G3V211 115 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 TMEM14EPQ6UXP3 125 aa9.98□□□□□ -0.81
CACNA1C-209ENST00000399603 XIRP1Q702N8 1843 aaKnown RBP9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 ZC2HC1AQ96GY0 325 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 ZMAT4Q9H898 229 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 SRCAPQ6ZRS2 3230 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 MINOS1Q5TGZ0 78 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 MINOS1-NBL1R4GNA1 71 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 C20orf197Q8N268 126 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 C15orf62A8K5M9 175 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 SPRY2O43597 315 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 WFDC2Q14508 124 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 C8orf86Q6ZUL3 223 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 PNRC2Q9NPJ4 139 aaKnown RBP9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 COL6A6A6NMZ7 2263 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 A0A096LNI7 61 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 RBAKDNA6NC62 111 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 FAM231DQ6ZW35 169 aa9.97□□□□□ -0.81
CACNA1C-209ENST00000399603 IGKV1-12A0A0C4DH73 117 aa9.96□□□□□ -0.81
CACNA1C-209ENST00000399603 IGKV1D-12P01611 117 aa9.96□□□□□ -0.81
CACNA1C-209ENST00000399603 CD177Q8N6Q3 437 aa9.96□□□□□ -0.81
CACNA1C-209ENST00000399603 SMIM27A0A1W2PRY6 76 aa9.96□□□□□ -0.81
CACNA1C-209ENST00000399603 SAA4P35542 130 aa9.96□□□□□ -0.82
CACNA1C-209ENST00000399603 RETNQ9HD89 108 aa9.96□□□□□ -0.82
CACNA1C-209ENST00000399603 LECT2O14960 151 aa9.96□□□□□ -0.82
CACNA1C-209ENST00000399603 LYL1P12980 280 aa9.96□□□□□ -0.82
CACNA1C-209ENST00000399603 ADCYAP1P18509 176 aa9.96□□□□□ -0.82
CACNA1C-209ENST00000399603 NDUFV3P56181 108 aaKnown RBP9.96□□□□□ -0.82
CACNA1C-209ENST00000399603 RNF152Q8N8N0 203 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms