RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 LINC01545Q5VT33 79 aa6.86□□□□□ -1.31
CTNND1-205ENST00000399050 PIP4P2Q8N4L2 257 aa6.86□□□□□ -1.31
CTNND1-205ENST00000399050 ANKRD29Q8N6D5 301 aa6.86□□□□□ -1.31
CTNND1-205ENST00000399050 DOCK9Q9BZ29 2069 aa6.86□□□□□ -1.31
CTNND1-205ENST00000399050 ANKRD39Q53RE8 183 aa6.86□□□□□ -1.31
CTNND1-205ENST00000399050 RTTNQ86VV8 2226 aa6.86□□□□□ -1.31
CTNND1-205ENST00000399050 EGR2P11161 476 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-205ENST00000399050 DTX1Q86Y01 620 aa6.85□□□□□ -1.31
CTNND1-205ENST00000399050 Q8NFD4 153 aa6.85□□□□□ -1.31
CTNND1-205ENST00000399050 MAP1BP46821 2468 aaKnown RBP6.85□□□□□ -1.31
CTNND1-205ENST00000399050 SPINK13Q1W4C9 94 aa6.85□□□□□ -1.31
CTNND1-205ENST00000399050 FOXI2Q6ZQN5 318 aa6.85□□□□□ -1.31
CTNND1-205ENST00000399050 LINC00311Q8N616 119 aa6.85□□□□□ -1.31
CTNND1-205ENST00000399050 C20orf78Q9BR46 151 aa6.85□□□□□ -1.31
CTNND1-205ENST00000399050 IGHV3-16A0A0C4DH30 117 aa6.85□□□□□ -1.31
CTNND1-205ENST00000399050 RPL35AP18077 110 aaKnown RBP6.85□□□□□ -1.31
CTNND1-205ENST00000399050 TRBV25-1A0A075B6N4 114 aa6.85□□□□□ -1.31
CTNND1-205ENST00000399050 K7EMI3 77 aa6.85□□□□□ -1.31
CTNND1-205ENST00000399050 FGF23Q9GZV9 251 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-205ENST00000399050 CFHR4Q92496 578 aa6.85□□□□□ -1.31
CTNND1-205ENST00000399050 PRSS29PA6NIE9 313 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 INS-IGF2F8WCM5 200 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 SS18Q15532 418 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 POU2AF1Q16633 256 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 SUMO4Q6EEV6 95 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 LYPD6Q86Y78 171 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 IGHG4P01861 327 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 NSUN5P1Q3KNT7 163 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 CLPSL1A2RUU4 121 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 G3V4G9 280 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 G3V318 75 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 LOXP28300 417 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-205ENST00000399050 OBSL1O75147 1896 aa6.84□□□□□ -1.31
CTNND1-205ENST00000399050 CFC1BP0CG36 223 aa6.84□□□□□ -1.32
CTNND1-205ENST00000399050 CFC1P0CG37 223 aa6.84□□□□□ -1.32
CTNND1-205ENST00000399050 GATA1P15976 413 aaPredicted RBP6.84□□□□□ -1.32
CTNND1-205ENST00000399050 TMEM126AQ9H061 195 aa6.84□□□□□ -1.32
CTNND1-205ENST00000399050 TRAV12-2A0A075B6T6 113 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 IGHV3-38A0A0C4DH36 116 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 RUSC1-AS1Q66K80 236 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 CMC4P56277 68 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-205ENST00000399050 SYNJ2BPP57105 145 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 DYNAPQ8N1N2 210 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 ZNF491Q8N8L2 437 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 IGHV1OR15-1A0A075B7D0 117 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 PFN2P35080 140 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 DEFB131AP59861 70 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 WFDC2Q14508 124 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 SVIPQ8NHG7 77 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 F8WEM9 126 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 C5orf47Q569G3 176 aa6.83□□□□□ -1.32
CTNND1-205ENST00000399050 TPRP12270 2363 aaKnown RBP6.83□□□□□ -1.32
CTNND1-205ENST00000399050 RNASE13Q5GAN3 156 aaKnown RBP6.83□□□□□ -1.32
CTNND1-205ENST00000399050 ICE1Q9Y2F5 2266 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 FRMD6-AS1P0C7T7 363 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 KRTAP27-1Q3LI81 207 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 HOXD3P31249 432 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-205ENST00000399050 FXYD2P54710 66 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 UBL5Q9BZL1 73 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 CRYBA4P53673 196 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 MYO7BQ6PIF6 2116 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 IGLV1-44P01699 117 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 GTSF1Q8WW33 167 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 FOXE3Q13461 319 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 C11orf53Q8IXP5 236 aa6.82□□□□□ -1.32
CTNND1-205ENST00000399050 LY6G6EA0A0G2JKS1 128 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 RHODO00212 210 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 TMEM258P61165 79 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 U3KQA8 63 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 TRAV13-2A0A0B4J235 113 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 UBE2E1P51965 193 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 Q6ZSR3 168 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 RS1O15537 224 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 GP9P14770 177 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 RBMY1FQ15415 496 aaKnown RBP6.81□□□□□ -1.32
CTNND1-205ENST00000399050 DOCK8Q8NF50 2099 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 ZNF493Q6ZR52 646 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 BPESC1Q9GZL8 116 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 C11orf1Q9H5F2 150 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 NDUFA4O00483 81 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 GNRH2O43555 120 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 CFHR3Q02985 330 aa6.81□□□□□ -1.32
CTNND1-205ENST00000399050 IGLV3-9A0A075B6K5 115 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 TINCRA0A1B0GVN0 87 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 KLHL30-AS1Q8NEE0 82 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 AHCTF1Q8WYP5 2266 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 HAMPP81172 84 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 ZNRF2Q8NHG8 242 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 TRAV12-1A0A0B4J245 112 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 PATE2Q6UY27 113 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 IGLV2-14P01704 120 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 DSCR9P59020 149 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 Q6ZS92 163 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 SMIM20Q8N5G0 67 aa6.8□□□□□ -1.32
CTNND1-205ENST00000399050 RBAKDNA6NC62 111 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 SHISA9B4DS77 424 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 BAALC-AS2P0C853 105 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 RPL39LQ96EH5 51 aaKnown RBP6.79□□□□□ -1.32
CTNND1-205ENST00000399050 XCL2Q9UBD3 114 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 PI4KAP42356 2102 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms