RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 PTPRQQ9UMZ3 2332 aa7.5□□□□□ -1.21
ATL3-201ENST00000398868 IGKV2D-24A0A075B6R9 120 aa7.5□□□□□ -1.21
ATL3-201ENST00000398868 IGHG3P01860 377 aa7.5□□□□□ -1.21
ATL3-201ENST00000398868 ZNF503-AS2A6NEH8 195 aa7.5□□□□□ -1.21
ATL3-201ENST00000398868 F6UB75 175 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 J3QRE1 110 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 DEFB112Q30KQ8 113 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 MRPL27Q9P0M9 148 aaKnown RBP7.49□□□□□ -1.21
ATL3-201ENST00000398868 IGHV1-69DA0A0B4J2H0 117 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 IGHV1-69P01742 117 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 TMEM30BQ3MIR4 351 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 SPRNQ5BIV9 151 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 OVOL1O14753 267 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 NDUFB8O95169 186 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 IGHG4P01861 327 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 MST1LQ2TV78 715 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 SLURP1P55000 103 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 SPATA25Q9BR10 227 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 NOP10Q9NPE3 64 aaKnown RBP7.49□□□□□ -1.21
ATL3-201ENST00000398868 EML6Q6ZMW3 1958 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 IGLV10-54A0A075B6I4 117 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 IGHV4-28A0A0C4DH34 117 aa7.49□□□□□ -1.21
ATL3-201ENST00000398868 NTN5Q8WTR8 489 aaPredicted RBP7.49□□□□□ -1.21
ATL3-201ENST00000398868 IGKV3D-7A0A0C4DH55 119 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 CRYGSP22914 178 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 CRIPAKQ8N1N5 446 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 WIPF2Q8TF74 440 aaPredicted RBP7.48□□□□□ -1.21
ATL3-201ENST00000398868 UBL5Q9BZL1 73 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 ANGP03950 147 aaKnown RBP7.48□□□□□ -1.21
ATL3-201ENST00000398868 B3GALT5-AS1P59052 145 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 THAP8Q8NA92 274 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 NCOR1P1Q9H4R4 102 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 BRK1Q8WUW1 75 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 SCRT2Q9NQ03 307 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 DKK2Q9UBU2 259 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 LYPD3O95274 346 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 IGHV4-38-2P0DP08 117 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 NMSQ5H8A3 153 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 ZNRF2Q8NHG8 242 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 DSCR8Q96T75 97 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 PROP1O75360 226 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 OTOGLQ3ZCN5 2332 aa7.48□□□□□ -1.21
ATL3-201ENST00000398868 IGHV4-30-2A0A087WSY4 118 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 A0A1B0GW64 132 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 J3QW42 95 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 C20orf144Q9BQM9 153 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 BDP1A6H8Y1 2624 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 CRLF1O75462 422 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 HOXB4P17483 251 aaPredicted RBP7.47□□□□□ -1.21
ATL3-201ENST00000398868 LIME1Q9H400 295 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 SS18Q15532 418 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 FAM90A9PA6NNJ1 464 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 MMP23AO75900 390 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 HLA-DMBP28068 263 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 DAZ1Q9NQZ3 744 aaKnown RBP7.47□□□□□ -1.21
ATL3-201ENST00000398868 IGHV3-30P01768 117 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 IGHV3-33P01772 117 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 IGHV3-30-3P0DP02 117 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 IGHV3-30-5P0DP03 117 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 A0A1B0GWJ7 208 aa7.47□□□□□ -1.21
ATL3-201ENST00000398868 PNRC2Q9NPJ4 139 aaKnown RBP7.47□□□□□ -1.21
ATL3-201ENST00000398868 SHISA9B4DS77 424 aa7.46□□□□□ -1.21
ATL3-201ENST00000398868 E9PQ18 207 aa7.46□□□□□ -1.21
ATL3-201ENST00000398868 COX8AP10176 69 aa7.46□□□□□ -1.21
ATL3-201ENST00000398868 NBL1P41271 181 aa7.46□□□□□ -1.21
ATL3-201ENST00000398868 GAS1P54826 345 aa7.46□□□□□ -1.21
ATL3-201ENST00000398868 RPL18AQ02543 176 aaKnown RBP7.46□□□□□ -1.21
ATL3-201ENST00000398868 DSCAML1Q8TD84 2053 aa7.46□□□□□ -1.21
ATL3-201ENST00000398868 FREM1Q5H8C1 2179 aa7.46□□□□□ -1.21
ATL3-201ENST00000398868 THSD7BQ9C0I4 1608 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 TEX48A0A1B0GUV7 120 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 CDKN1BP46527 198 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 MRPL51Q4U2R6 128 aaKnown RBP7.46□□□□□ -1.22
ATL3-201ENST00000398868 MINOS1Q5TGZ0 78 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 Q6ZRM9 215 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 RNASE8Q8TDE3 154 aaKnown RBP7.46□□□□□ -1.22
ATL3-201ENST00000398868 MINOS1-NBL1R4GNA1 71 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 FAM208BQ5VWN6 2430 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 MUC6Q6W4X9 2439 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 A0A1W2PPI3 338 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 C15orf62A8K5M9 175 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 NLRC5Q86WI3 1866 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 A0A0U1RQV1 116 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 LRCOL1A6NCL2 159 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 XCL1P47992 114 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 TMEM258P61165 79 aa7.46□□□□□ -1.22
ATL3-201ENST00000398868 MRPL35Q9NZE8 188 aaKnown RBP7.46□□□□□ -1.22
ATL3-201ENST00000398868 M0R1W7 72 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 Q6P435 159 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 OR11H6Q8NGC7 330 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 BAALCQ8WXS3 180 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 OVOL2Q9BRP0 275 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 TRAV1-1A0A0B4J248 108 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 LINC00271P0C7V0 271 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 LY6G5BQ8NDX9 201 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 IGHV2-70DA0A0C4DH43 119 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 TDRG1Q3Y452 100 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 UBE2BP63146 152 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 C12orf74Q32Q52 190 aa7.45□□□□□ -1.22
ATL3-201ENST00000398868 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms