RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SMIM17P0DL12 118 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 ZNF493Q6ZR52 646 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 RNF182Q8N6D2 247 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 ZNF418Q8TF45 676 aaPredicted RBP7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 DPF1Q92782 380 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 PRR25Q96S07 402 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 SPANXB1Q9NS25 103 aaPredicted RBP7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 ONECUT1Q9UBC0 465 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 LOC107984156A0A0G2JMH3 177 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 A0A1B0GV72 72 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 NCBP2LA6PVI3 153 aaKnown RBP7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 TIMM23O14925 209 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 DPM2O94777 84 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 GAGE13Q4V321 117 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 ARL17AQ8IVW1 177 aa7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 ANKRD11Q6UB99 2663 aaPredicted RBP7.7□□□□□ -1.18
PTCHD4-202ENST00000398738 C12orf74Q32Q52 190 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 TMEM30BQ3MIR4 351 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 ATP6V0BQ99437 205 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 MBD3L4A6NDZ8 208 aaPredicted RBP7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 MBD3L3A6NE82 208 aaPredicted RBP7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 MBD3L5A6NJ08 208 aaPredicted RBP7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 TRGV3P03979 118 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 GFRALQ6UXV0 394 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 FOXI2Q6ZQN5 318 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 Q6ZQT7 251 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 MBD3L2Q8NHZ7 208 aaPredicted RBP7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 PRAC2D3DTV9 90 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 LY6HO94772 140 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 TMEM155Q4W5P6 130 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 TTC9CQ8N5M4 171 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 MYOZ3Q8TDC0 251 aa7.69□□□□□ -1.18
PTCHD4-202ENST00000398738 TRAV26-1A0A087WT03 109 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 DTX2Q86UW9 622 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 PTH2Q96A98 100 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 U3KQK5 164 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 BUB1B-PAK6H3BSN5 160 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 K7EM74 188 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 RNF185Q96GF1 192 aa7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 ZFHX2Q9C0A1 2572 aaPredicted RBP7.68□□□□□ -1.18
PTCHD4-202ENST00000398738 PHLDA1Q8WV24 401 aaPredicted RBP7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 NDUFS8O00217 210 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 APOMO95445 188 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 EMP1P54849 157 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 PAX8Q06710 450 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 KLRD1Q13241 179 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 GLMPQ8WWB7 406 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 BMI1P35226 326 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 IL17RELQ6ZVW7 336 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 SYT8Q8NBV8 401 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 DEFB124Q8NES8 71 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 HIF1ANQ9NWT6 349 aa7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 MRPL16Q9NX20 251 aaKnown RBP7.67□□□□□ -1.18
PTCHD4-202ENST00000398738 DCHS2Q6V1P9 2916 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 E9PLD3 99 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 PSMB2P49721 201 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 SCGB1D4Q6XE38 83 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 DYNAPQ8N1N2 210 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 LINC00311Q8N616 119 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 RALYQ9UKM9 306 aaKnown RBP7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 F8W1H4 67 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 H3BVH4 76 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 CRYGBP07316 175 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 DLX6P56179 175 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 RNASE6Q93091 150 aaKnown RBP7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 VKORC1Q9BQB6 163 aa7.66□□□□□ -1.18
PTCHD4-202ENST00000398738 FABP5P3A8MUU1 101 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 SPANXN1Q5VSR9 72 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 CFHR4Q92496 578 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 NXT2Q9NPJ8 142 aaKnown RBP7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 MAP1AP78559 2803 aaPredicted RBP7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 MRPS12O15235 138 aaKnown RBP7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 MFAP4P55083 255 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 PVRIGQ6DKI7 326 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 LYPD1Q8N2G4 141 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 ZNF502Q8TBZ5 544 aa7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 TLN1Q9Y490 2541 aaKnown RBP7.65□□□□□ -1.18
PTCHD4-202ENST00000398738 COL6A6A6NMZ7 2263 aa7.65□□□□□ -1.19
PTCHD4-202ENST00000398738 OR11H12B2RN74 326 aa7.65□□□□□ -1.19
PTCHD4-202ENST00000398738 OR11H1Q8NG94 326 aa7.65□□□□□ -1.19
PTCHD4-202ENST00000398738 OR11H2Q8NH07 326 aa7.65□□□□□ -1.19
PTCHD4-202ENST00000398738 C21orf62Q9NYP8 219 aa7.65□□□□□ -1.19
PTCHD4-202ENST00000398738 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 LINC01548A6NM66 108 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 IGLV1-47P01700 117 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 HLA-DRB4P13762 266 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 RPL7P18124 248 aaKnown RBP7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 CRYBA4P53673 196 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 SRSF8Q9BRL6 282 aaKnown RBP7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 HLA-DRB4X5D2U9 266 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 ANKHD1Q8IWZ3 2542 aaKnown RBP7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 M0R381 172 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 SPINK8P0C7L1 97 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 ZNF883P0CG24 379 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 ZFP2Q6ZN57 461 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 TM2D2Q9BX73 214 aa7.64□□□□□ -1.19
PTCHD4-202ENST00000398738 HIGD1BQ9P298 99 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms