RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 A0A1B0GV50 99 aa11.25□□□□□ -0.61
CUX2-202ENST00000397643 PPT1P50897 306 aa11.25□□□□□ -0.61
CUX2-202ENST00000397643 KRTAP10-2P60368 255 aa11.25□□□□□ -0.61
CUX2-202ENST00000397643 PSG3Q16557 428 aa11.25□□□□□ -0.61
CUX2-202ENST00000397643 RNF182Q8N6D2 247 aa11.25□□□□□ -0.61
CUX2-202ENST00000397643 C20orf173Q96LM9 149 aa11.25□□□□□ -0.61
CUX2-202ENST00000397643 KRTAP1-5Q9BYS1 174 aa11.25□□□□□ -0.61
CUX2-202ENST00000397643 TMPRSS5Q9H3S3 457 aa11.25□□□□□ -0.61
CUX2-202ENST00000397643 LINC00588Q9Y4M8 146 aa11.25□□□□□ -0.61
CUX2-202ENST00000397643 PLAC8L1A1L4L8 177 aa11.24□□□□□ -0.61
CUX2-202ENST00000397643 LYRM9A8MSI8 78 aa11.24□□□□□ -0.61
CUX2-202ENST00000397643 ZNF738Q8NE65 137 aa11.24□□□□□ -0.61
CUX2-202ENST00000397643 MRPL53Q96EL3 112 aaKnown RBP11.24□□□□□ -0.61
CUX2-202ENST00000397643 IGF2BP2-AS1Q96M15 143 aa11.24□□□□□ -0.61
CUX2-202ENST00000397643 Q9H3A6 140 aa11.24□□□□□ -0.61
CUX2-202ENST00000397643 OTORQ9NRC9 128 aa11.24□□□□□ -0.61
CUX2-202ENST00000397643 CRXO43186 299 aaPredicted RBP11.23□□□□□ -0.61
CUX2-202ENST00000397643 ICAM4Q14773 271 aa11.23□□□□□ -0.61
CUX2-202ENST00000397643 EBLN2Q6P2I7 272 aa11.23□□□□□ -0.61
CUX2-202ENST00000397643 EXOC3-AS1Q8N2X6 119 aa11.23□□□□□ -0.61
CUX2-202ENST00000397643 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
CUX2-202ENST00000397643 PGPA6NDG6 321 aa11.22□□□□□ -0.61
CUX2-202ENST00000397643 ZNF705GA8MUZ8 300 aaPredicted RBP11.22□□□□□ -0.61
CUX2-202ENST00000397643 NUDT3O95989 172 aa11.22□□□□□ -0.61
CUX2-202ENST00000397643 CSN1S1P47710 185 aa11.22□□□□□ -0.61
CUX2-202ENST00000397643 CMTM2Q8TAZ6 248 aa11.22□□□□□ -0.61
CUX2-202ENST00000397643 RXFP4Q8TDU9 374 aa11.22□□□□□ -0.61
CUX2-202ENST00000397643 RPUSD4Q96CM3 377 aaKnown RBP11.22□□□□□ -0.61
CUX2-202ENST00000397643 NKX6-2Q9C056 277 aaPredicted RBP11.22□□□□□ -0.61
CUX2-202ENST00000397643 MYCBP2O75592 4640 aa11.22□□□□□ -0.61
CUX2-202ENST00000397643 F5H768 121 aa11.21□□□□□ -0.61
CUX2-202ENST00000397643 IFNA1P01562 189 aa11.21□□□□□ -0.61
CUX2-202ENST00000397643 DEFB130BP0DP73 79 aa11.21□□□□□ -0.61
CUX2-202ENST00000397643 DEFB130AP0DP74 79 aa11.21□□□□□ -0.61
CUX2-202ENST00000397643 CCL18P55774 89 aa11.21□□□□□ -0.61
CUX2-202ENST00000397643 UBE2G2P60604 165 aa11.21□□□□□ -0.61
CUX2-202ENST00000397643 CCL20P78556 96 aa11.21□□□□□ -0.61
CUX2-202ENST00000397643 TMEM208Q9BTX3 173 aa11.21□□□□□ -0.61
CUX2-202ENST00000397643 MANBALQ9NQG1 85 aa11.21□□□□□ -0.61
CUX2-202ENST00000397643 ARL2-SNX15V9GYD0 113 aa11.21□□□□□ -0.61
CUX2-202ENST00000397643 VPS13BQ7Z7G8 4022 aa11.2□□□□□ -0.62
CUX2-202ENST00000397643 FAM74A7A6NL05 159 aa11.2□□□□□ -0.62
CUX2-202ENST00000397643 M0R3E3 92 aa11.2□□□□□ -0.62
CUX2-202ENST00000397643 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
CUX2-202ENST00000397643 TSPOP30536 169 aa11.2□□□□□ -0.62
CUX2-202ENST00000397643 RAB14P61106 215 aa11.2□□□□□ -0.62
CUX2-202ENST00000397643 SUMO1P63165 101 aaKnown RBP11.2□□□□□ -0.62
CUX2-202ENST00000397643 CST9LP1Q5W188 147 aa11.2□□□□□ -0.62
CUX2-202ENST00000397643 ARL6IP6Q8N6S5 226 aa11.2□□□□□ -0.62
CUX2-202ENST00000397643 GNG13Q9P2W3 67 aa11.2□□□□□ -0.62
CUX2-202ENST00000397643 M0R2Z0 102 aa11.19□□□□□ -0.62
CUX2-202ENST00000397643 PAGE4O60829 102 aa11.19□□□□□ -0.62
CUX2-202ENST00000397643 SLC25A5P05141 298 aaKnown RBP11.19□□□□□ -0.62
CUX2-202ENST00000397643 AZU1P20160 251 aa11.19□□□□□ -0.62
CUX2-202ENST00000397643 SPINK13Q1W4C9 94 aa11.19□□□□□ -0.62
CUX2-202ENST00000397643 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
CUX2-202ENST00000397643 OR8A1Q8NGG7 326 aa11.19□□□□□ -0.62
CUX2-202ENST00000397643 OR10J6PQ8NGY7 276 aa11.19□□□□□ -0.62
CUX2-202ENST00000397643 LYPD6BQ8NI32 183 aa11.19□□□□□ -0.62
CUX2-202ENST00000397643 GGTLC3B5MD39 225 aa11.18□□□□□ -0.62
CUX2-202ENST00000397643 PRAC2D3DTV9 90 aa11.18□□□□□ -0.62
CUX2-202ENST00000397643 INSP01308 110 aa11.18□□□□□ -0.62
CUX2-202ENST00000397643 ATP5G1P05496 136 aa11.18□□□□□ -0.62
CUX2-202ENST00000397643 BTF3P20290 206 aaKnown RBP11.18□□□□□ -0.62
CUX2-202ENST00000397643 TAGLN2P37802 199 aaKnown RBP11.18□□□□□ -0.62
CUX2-202ENST00000397643 ATP5G3P48201 142 aa11.18□□□□□ -0.62
CUX2-202ENST00000397643 CNN1P51911 297 aaKnown RBP11.18□□□□□ -0.62
CUX2-202ENST00000397643 IFITM2Q01629 132 aa11.18□□□□□ -0.62
CUX2-202ENST00000397643 HIST1H1AQ02539 215 aaPredicted RBP11.18□□□□□ -0.62
CUX2-202ENST00000397643 Q9H8V8 135 aa11.18□□□□□ -0.62
CUX2-202ENST00000397643 EPM2AB3EWF7 344 aa11.17□□□□□ -0.62
CUX2-202ENST00000397643 NMBP08949 121 aa11.17□□□□□ -0.62
CUX2-202ENST00000397643 TCEAL7Q9BRU2 100 aa11.17□□□□□ -0.62
CUX2-202ENST00000397643 EPDR1Q9UM22 224 aa11.17□□□□□ -0.62
CUX2-202ENST00000397643 RPH3ALQ9UNE2 315 aa11.17□□□□□ -0.62
CUX2-202ENST00000397643 SERTM2A0A1B0GWG4 89 aa11.16□□□□□ -0.62
CUX2-202ENST00000397643 CBY3A6NI87 242 aa11.16□□□□□ -0.62
CUX2-202ENST00000397643 DIRC3C9JPN6 131 aa11.16□□□□□ -0.62
CUX2-202ENST00000397643 F6UZH7 168 aa11.16□□□□□ -0.62
CUX2-202ENST00000397643 PCNPQ8WW12 178 aaKnown RBP11.16□□□□□ -0.62
CUX2-202ENST00000397643 TXNDC17Q9BRA2 123 aa11.16□□□□□ -0.62
CUX2-202ENST00000397643 PPP1R14DQ9NXH3 145 aa11.16□□□□□ -0.62
CUX2-202ENST00000397643 IGKV2-40A0A087WW87 121 aaPredicted RBP11.15□□□□□ -0.62
CUX2-202ENST00000397643 RBAKDNA6NC62 111 aa11.15□□□□□ -0.62
CUX2-202ENST00000397643 K7EQM0 130 aa11.15□□□□□ -0.62
CUX2-202ENST00000397643 IGKV2D-40P01614 121 aaPredicted RBP11.15□□□□□ -0.62
CUX2-202ENST00000397643 TCRAP04437 139 aa11.15□□□□□ -0.62
CUX2-202ENST00000397643 PRB4P10163 310 aaPredicted RBP11.15□□□□□ -0.62
CUX2-202ENST00000397643 BCL2P10415 239 aa11.15□□□□□ -0.62
CUX2-202ENST00000397643 GNG5P63218 68 aa11.15□□□□□ -0.62
CUX2-202ENST00000397643 TTC32Q5I0X7 151 aa11.15□□□□□ -0.62
CUX2-202ENST00000397643 GOLT1AQ6ZVE7 132 aa11.15□□□□□ -0.62
CUX2-202ENST00000397643 HIST1H2BAQ96A08 127 aa11.15□□□□□ -0.62
CUX2-202ENST00000397643 LINC00477Q96M19 166 aa11.15□□□□□ -0.62
CUX2-202ENST00000397643 VAX2Q9UIW0 290 aa11.15□□□□□ -0.62
CUX2-202ENST00000397643 TRAV12-2A0A075B6T6 113 aa11.14□□□□□ -0.63
CUX2-202ENST00000397643 NPIPB6E9PJ23 425 aa11.14□□□□□ -0.63
CUX2-202ENST00000397643 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
CUX2-202ENST00000397643 CCDC28AQ8IWP9 274 aa11.14□□□□□ -0.63
CUX2-202ENST00000397643 UPK3BQ9BT76 320 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms