RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CRIP1P50238 77 aa11.27□□□□□ -0.6
CAPN3-207ENST00000397200 TM4SF20Q53R12 229 aa11.27□□□□□ -0.6
CAPN3-207ENST00000397200 RBPMS2Q6ZRY4 209 aaKnown RBP11.27□□□□□ -0.6
CAPN3-207ENST00000397200 TCF24Q7RTU0 167 aa11.27□□□□□ -0.6
CAPN3-207ENST00000397200 MRPL53Q96EL3 112 aaKnown RBP11.27□□□□□ -0.6
CAPN3-207ENST00000397200 PCP4L1A6NKN8 68 aa11.27□□□□□ -0.61
CAPN3-207ENST00000397200 NUPR1O60356 82 aa11.27□□□□□ -0.61
CAPN3-207ENST00000397200 APCSP02743 223 aa11.27□□□□□ -0.61
CAPN3-207ENST00000397200 APOHP02749 345 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-207ENST00000397200 SLAQ13239 276 aa11.27□□□□□ -0.61
CAPN3-207ENST00000397200 KRTAP21-3Q3LHN1 58 aa11.27□□□□□ -0.61
CAPN3-207ENST00000397200 LINC00482Q8N8I6 264 aa11.27□□□□□ -0.61
CAPN3-207ENST00000397200 OR9G4Q8NGQ1 327 aa11.27□□□□□ -0.61
CAPN3-207ENST00000397200 GSN-AS1Q9NRJ2 163 aa11.27□□□□□ -0.61
CAPN3-207ENST00000397200 IGKV2-40A0A087WW87 121 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-207ENST00000397200 TMEM213A2RRL7 107 aa11.26□□□□□ -0.61
CAPN3-207ENST00000397200 RBAKDNA6NC62 111 aa11.26□□□□□ -0.61
CAPN3-207ENST00000397200 IGKV2D-40P01614 121 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-207ENST00000397200 HBBP68871 147 aa11.26□□□□□ -0.61
CAPN3-207ENST00000397200 SAPCD1Q5SSQ6 148 aa11.26□□□□□ -0.61
CAPN3-207ENST00000397200 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
CAPN3-207ENST00000397200 GATD1Q8NB37 220 aa11.26□□□□□ -0.61
CAPN3-207ENST00000397200 GLMPQ8WWB7 406 aa11.26□□□□□ -0.61
CAPN3-207ENST00000397200 PRR25Q96S07 402 aa11.26□□□□□ -0.61
CAPN3-207ENST00000397200 IGHV7-4-1A0A0J9YVY3 117 aa11.25□□□□□ -0.61
CAPN3-207ENST00000397200 C2orf70A6NJV1 201 aa11.25□□□□□ -0.61
CAPN3-207ENST00000397200 SERF1AO75920 110 aa11.25□□□□□ -0.61
CAPN3-207ENST00000397200 RAB4BP61018 213 aa11.25□□□□□ -0.61
CAPN3-207ENST00000397200 OR2D3Q8NGH3 330 aa11.25□□□□□ -0.61
CAPN3-207ENST00000397200 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
CAPN3-207ENST00000397200 IGHV3OR16-13A0A075B7E8 117 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 IGHV3-49A0A0A0MS15 119 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 IGHV3-74A0A0B4J1X5 117 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 F2Z2F3 143 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 GZMBP10144 247 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 HLA-DMBP28068 263 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 BMI1P35226 326 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 PAFAH1B2P68402 229 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 Q6AWC8 147 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 LCN12Q6JVE5 192 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 TRAV8-2A0A0B4J237 113 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 A0A1W2PS18 150 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 CT45A10P0DMU9 189 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 EDN2P20800 178 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 SRIP30626 198 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 KIAA1644Q3SXP7 199 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 CLEC5AQ9NY25 188 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 SMPXQ9UHP9 88 aa11.24□□□□□ -0.61
CAPN3-207ENST00000397200 IGHV3-66A0A0C4DH42 116 aa11.23□□□□□ -0.61
CAPN3-207ENST00000397200 CSN3P07498 182 aa11.23□□□□□ -0.61
CAPN3-207ENST00000397200 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
CAPN3-207ENST00000397200 ASCL2Q99929 193 aa11.23□□□□□ -0.61
CAPN3-207ENST00000397200 VGLL1Q99990 258 aa11.23□□□□□ -0.61
CAPN3-207ENST00000397200 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
CAPN3-207ENST00000397200 SH2D1AO60880 128 aa11.22□□□□□ -0.61
CAPN3-207ENST00000397200 CD33P20138 364 aa11.22□□□□□ -0.61
CAPN3-207ENST00000397200 FAM162BQ5T6X4 162 aa11.22□□□□□ -0.61
CAPN3-207ENST00000397200 BAGE3Q86Y29 109 aa11.22□□□□□ -0.61
CAPN3-207ENST00000397200 C18orf32Q8TCD1 76 aa11.22□□□□□ -0.61
CAPN3-207ENST00000397200 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-207ENST00000397200 A0A1B0GW15 77 aa11.21□□□□□ -0.61
CAPN3-207ENST00000397200 ZNF705FA8MVS1 300 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-207ENST00000397200 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
CAPN3-207ENST00000397200 DYNLRB2Q8TF09 96 aa11.21□□□□□ -0.61
CAPN3-207ENST00000397200 KCNS1Q96KK3 526 aa11.21□□□□□ -0.61
CAPN3-207ENST00000397200 PPP1R14DQ9NXH3 145 aa11.21□□□□□ -0.61
CAPN3-207ENST00000397200 ANK2Q01484 3957 aa11.21□□□□□ -0.62
CAPN3-207ENST00000397200 PRAC2D3DTV9 90 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 SAP30O75446 220 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 CAMPP49913 170 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 ADAMTSL5Q6ZMM2 481 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 SPATA3Q8NHX4 192 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 Q8TAT8 98 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 RCHY1Q96PM5 261 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 SIGLEC8Q9NYZ4 499 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 A0A1B0GUT8 65 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 SOCS3O14543 225 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 PRB4P10163 310 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-207ENST00000397200 RNF182Q8N6D2 247 aa11.2□□□□□ -0.62
CAPN3-207ENST00000397200 SSBP4Q9BWG4 385 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-207ENST00000397200 ZNF80P51504 273 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-207ENST00000397200 RPS20P60866 119 aaKnown RBP11.19□□□□□ -0.62
CAPN3-207ENST00000397200 RIGQ13278 110 aa11.19□□□□□ -0.62
CAPN3-207ENST00000397200 C9orf47Q6ZRZ4 202 aa11.19□□□□□ -0.62
CAPN3-207ENST00000397200 WFDC9Q8NEX5 89 aa11.19□□□□□ -0.62
CAPN3-207ENST00000397200 NDFIP1Q9BT67 221 aa11.19□□□□□ -0.62
CAPN3-207ENST00000397200 MCRIP2Q9BUT9 160 aaKnown RBP11.19□□□□□ -0.62
CAPN3-207ENST00000397200 SELENOKQ9Y6D0 94 aa11.19□□□□□ -0.62
CAPN3-207ENST00000397200 VWFP04275 2813 aa11.19□□□□□ -0.62
CAPN3-207ENST00000397200 TMEM189A5PLL7 270 aa11.18□□□□□ -0.62
CAPN3-207ENST00000397200 GPX1P07203 203 aa11.18□□□□□ -0.62
CAPN3-207ENST00000397200 CTRLP40313 264 aa11.18□□□□□ -0.62
CAPN3-207ENST00000397200 Q6ZWC4 215 aa11.18□□□□□ -0.62
CAPN3-207ENST00000397200 ARMS2P0C7Q2 107 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 RPL11P62913 178 aaKnown RBP11.17□□□□□ -0.62
CAPN3-207ENST00000397200 IQCJQ1A5X6 159 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 C9orf66Q5T8R8 295 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 ZNF575Q86XF7 245 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 TRRAPQ9Y4A5 3859 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 LOC102724200A0A096LPH7 203 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms