RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 VSTM5A8MXK1 200 aa10.7□□□□□ -0.7
NUP98-204ENST00000397004 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.7□□□□□ -0.7
NUP98-204ENST00000397004 IGHV3-49A0A0A0MS15 119 aa10.7□□□□□ -0.7
NUP98-204ENST00000397004 GCSHP23434 173 aa10.7□□□□□ -0.7
NUP98-204ENST00000397004 CSMD2Q7Z408 3487 aa10.7□□□□□ -0.7
NUP98-204ENST00000397004 TMEM8BA6NDV4 472 aa10.7□□□□□ -0.7
NUP98-204ENST00000397004 BUB3O43684 328 aa10.7□□□□□ -0.7
NUP98-204ENST00000397004 IGF1P05019 195 aa10.7□□□□□ -0.7
NUP98-204ENST00000397004 AGPAT4-IT1Q9H0P7 198 aa10.7□□□□□ -0.7
NUP98-204ENST00000397004 LINC01559Q495D7 138 aa10.69□□□□□ -0.7
NUP98-204ENST00000397004 TRAV40A0A0B4J280 105 aa10.69□□□□□ -0.7
NUP98-204ENST00000397004 GTF2H5Q6ZYL4 71 aa10.69□□□□□ -0.7
NUP98-204ENST00000397004 FOXC2Q99958 501 aa10.69□□□□□ -0.7
NUP98-204ENST00000397004 CHAC1Q9BUX1 264 aa10.69□□□□□ -0.7
NUP98-204ENST00000397004 PRR9Q5T870 116 aa10.69□□□□□ -0.7
NUP98-204ENST00000397004 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
NUP98-204ENST00000397004 MAP1LC3AQ9H492 121 aa10.69□□□□□ -0.7
NUP98-204ENST00000397004 MRPL35Q9NZE8 188 aaKnown RBP10.69□□□□□ -0.7
NUP98-204ENST00000397004 FABP5P3A8MUU1 101 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 SAMD5Q5TGI4 173 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 Q8N9W7 124 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 PRTN3P24158 256 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 SMIM15Q7Z3B0 74 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 VMO1Q7Z5L0 202 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 CCDC140Q96MF4 163 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 FAM90A27PA6NNH2 459 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 BMI1P35226 326 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 EFNA4P52798 201 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 TMEM190Q8WZ59 177 aa10.68□□□□□ -0.7
NUP98-204ENST00000397004 CLEC3BP05452 202 aa10.67□□□□□ -0.7
NUP98-204ENST00000397004 SRSF2Q01130 221 aaKnown RBP10.67□□□□□ -0.7
NUP98-204ENST00000397004 C15orf32Q32M92 178 aa10.67□□□□□ -0.7
NUP98-204ENST00000397004 AKAP6Q13023 2319 aa10.67□□□□□ -0.7
NUP98-204ENST00000397004 TEX48A0A1B0GUV7 120 aa10.67□□□□□ -0.7
NUP98-204ENST00000397004 TMEM238C9JI98 176 aa10.67□□□□□ -0.7
NUP98-204ENST00000397004 PRSS1P07477 247 aa10.67□□□□□ -0.7
NUP98-204ENST00000397004 ZNF502Q8TBZ5 544 aa10.67□□□□□ -0.7
NUP98-204ENST00000397004 IGKCP01834 107 aa10.67□□□□□ -0.7
NUP98-204ENST00000397004 SMIM17P0DL12 118 aa10.67□□□□□ -0.7
NUP98-204ENST00000397004 PTPRZ1P23471 2315 aaPredicted RBP10.67□□□□□ -0.7
NUP98-204ENST00000397004 GOSR1O95249 250 aa10.66□□□□□ -0.7
NUP98-204ENST00000397004 A0A1W2PPR1 153 aa10.66□□□□□ -0.7
NUP98-204ENST00000397004 G3V318 75 aa10.66□□□□□ -0.7
NUP98-204ENST00000397004 EBI3Q14213 229 aa10.66□□□□□ -0.7
NUP98-204ENST00000397004 AP1S3Q96PC3 154 aa10.66□□□□□ -0.7
NUP98-204ENST00000397004 TMEM160Q9NX00 188 aa10.66□□□□□ -0.7
NUP98-204ENST00000397004 HIGD1BQ9P298 99 aa10.66□□□□□ -0.7
NUP98-204ENST00000397004 DEFB1P60022 68 aa10.66□□□□□ -0.7
NUP98-204ENST00000397004 TM2D2Q9BX73 214 aa10.65□□□□□ -0.7
NUP98-204ENST00000397004 Q8N8P6 123 aa10.65□□□□□ -0.7
NUP98-204ENST00000397004 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
NUP98-204ENST00000397004 SMIM13P0DJ93 91 aa10.65□□□□□ -0.7
NUP98-204ENST00000397004 IGF2RP11717 2491 aa10.65□□□□□ -0.7
NUP98-204ENST00000397004 SPTBN1Q01082 2364 aaKnown RBP10.65□□□□□ -0.71
NUP98-204ENST00000397004 NXT2Q9NPJ8 142 aaKnown RBP10.65□□□□□ -0.71
NUP98-204ENST00000397004 CEND1Q8N111 149 aa10.64□□□□□ -0.71
NUP98-204ENST00000397004 ATP6V0E1O15342 81 aa10.64□□□□□ -0.71
NUP98-204ENST00000397004 WFDC2Q14508 124 aa10.64□□□□□ -0.71
NUP98-204ENST00000397004 VKORC1Q9BQB6 163 aa10.64□□□□□ -0.71
NUP98-204ENST00000397004 M0R1W7 72 aa10.64□□□□□ -0.71
NUP98-204ENST00000397004 C11orf71Q6IPW1 123 aa10.64□□□□□ -0.71
NUP98-204ENST00000397004 MTURNQ8N3F0 131 aa10.64□□□□□ -0.71
NUP98-204ENST00000397004 RNF223E7ERA6 249 aa10.63□□□□□ -0.71
NUP98-204ENST00000397004 CEACAM3P40198 252 aa10.63□□□□□ -0.71
NUP98-204ENST00000397004 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
NUP98-204ENST00000397004 FABP2P12104 132 aa10.63□□□□□ -0.71
NUP98-204ENST00000397004 TMEM11P17152 192 aa10.63□□□□□ -0.71
NUP98-204ENST00000397004 ECSCRQ19T08 205 aa10.63□□□□□ -0.71
NUP98-204ENST00000397004 CLEC19AQ6UXS0 136 aa10.63□□□□□ -0.71
NUP98-204ENST00000397004 DPM2O94777 84 aa10.63□□□□□ -0.71
NUP98-204ENST00000397004 AMTNQ6UX39 209 aa10.63□□□□□ -0.71
NUP98-204ENST00000397004 E9PLD3 99 aa10.62□□□□□ -0.71
NUP98-204ENST00000397004 OR5A1Q8NGJ0 315 aa10.62□□□□□ -0.71
NUP98-204ENST00000397004 CUBNO60494 3623 aa10.62□□□□□ -0.71
NUP98-204ENST00000397004 PRSS47A8MTI9 375 aa10.62□□□□□ -0.71
NUP98-204ENST00000397004 IGLL5B9A064 214 aa10.62□□□□□ -0.71
NUP98-204ENST00000397004 RAXQ9Y2V3 346 aa10.62□□□□□ -0.71
NUP98-204ENST00000397004 LCNL1Q6ZST4 164 aa10.61□□□□□ -0.71
NUP98-204ENST00000397004 C8orf86Q6ZUL3 223 aa10.61□□□□□ -0.71
NUP98-204ENST00000397004 RBAKDNA6NC62 111 aa10.61□□□□□ -0.71
NUP98-204ENST00000397004 GPHB5Q86YW7 130 aa10.61□□□□□ -0.71
NUP98-204ENST00000397004 SIRPDQ9H106 197 aa10.61□□□□□ -0.71
NUP98-204ENST00000397004 PRSS29PA6NIE9 313 aa10.6□□□□□ -0.71
NUP98-204ENST00000397004 H3BMG7 143 aa10.6□□□□□ -0.71
NUP98-204ENST00000397004 SH2D6Q7Z4S9 175 aa10.6□□□□□ -0.71
NUP98-204ENST00000397004 UFC1Q9Y3C8 167 aa10.6□□□□□ -0.71
NUP98-204ENST00000397004 INSL3P51460 131 aa10.6□□□□□ -0.71
NUP98-204ENST00000397004 LAGE3Q14657 143 aa10.6□□□□□ -0.71
NUP98-204ENST00000397004 A0A087WX48 190 aa10.6□□□□□ -0.71
NUP98-204ENST00000397004 ABCA2Q9BZC7 2435 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 TRBV7-3A0A075B6L6 115 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.59□□□□□ -0.71
NUP98-204ENST00000397004 H3BVH4 76 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 RPL24P83731 157 aaKnown RBP10.59□□□□□ -0.71
NUP98-204ENST00000397004 ADORA2A-AS1P86434 159 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 KLK9Q2XQG4 91 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 FAM110DQ8TAY7 271 aaPredicted RBP10.59□□□□□ -0.71
NUP98-204ENST00000397004 RPL39LQ96EH5 51 aaKnown RBP10.59□□□□□ -0.71
NUP98-204ENST00000397004 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
NUP98-204ENST00000397004 KLK9Q9UKQ9 250 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms