RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 FHL3Q13643 280 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 PMCHL1Q16048 86 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 SHANK2-AS3Q9BTD1 123 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 UQCR10Q9UDW1 63 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 A0A1W2PRX2 142 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 M0R2Z0 102 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 IGLC2P0DOY2 106 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 IGLC3P0DOY3 106 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 S100A7AQ86SG5 101 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 OR1N2Q8NGR9 330 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
TM9SF1-202ENST00000396854 RNASEKQ6P5S7 137 aaKnown RBP11.3□□□□□ -0.6
TM9SF1-202ENST00000396854 RBPMS2Q6ZRY4 209 aaKnown RBP11.3□□□□□ -0.6
TM9SF1-202ENST00000396854 OR2D3Q8NGH3 330 aa11.3□□□□□ -0.6
TM9SF1-202ENST00000396854 DAZAP1Q96EP5 407 aaKnown RBP11.3□□□□□ -0.6
TM9SF1-202ENST00000396854 RAX2Q96IS3 184 aa11.3□□□□□ -0.6
TM9SF1-202ENST00000396854 TENM1Q9UKZ4 2725 aa11.3□□□□□ -0.6
TM9SF1-202ENST00000396854 IGLV2-11P01706 119 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 ZNF124Q15973 351 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 UNQ9165/PRO28630Q6UXU0 137 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 DPF1Q92782 380 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 ZNF747Q9BV97 191 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 NSUN5P1Q3KNT7 163 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 FAM106AQ4KMX7 169 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 URB1-AS1Q96HZ7 61 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 PGLYRP4Q96LB8 373 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 RNF24Q9Y225 148 aa11.29□□□□□ -0.6
TM9SF1-202ENST00000396854 C2orf70A6NJV1 201 aa11.28□□□□□ -0.6
TM9SF1-202ENST00000396854 CCL24O00175 119 aa11.28□□□□□ -0.6
TM9SF1-202ENST00000396854 LGALS9O00182 355 aa11.28□□□□□ -0.6
TM9SF1-202ENST00000396854 ZNF25P17030 456 aaPredicted RBP11.28□□□□□ -0.6
TM9SF1-202ENST00000396854 G0S2P27469 103 aa11.28□□□□□ -0.6
TM9SF1-202ENST00000396854 SLURP1P55000 103 aa11.28□□□□□ -0.6
TM9SF1-202ENST00000396854 EXOC3-AS1Q8N2X6 119 aa11.28□□□□□ -0.6
TM9SF1-202ENST00000396854 DUX3Q96PT4 197 aa11.28□□□□□ -0.6
TM9SF1-202ENST00000396854 RABAC1Q9UI14 185 aa11.28□□□□□ -0.6
TM9SF1-202ENST00000396854 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
TM9SF1-202ENST00000396854 TRAV8-1A0A0A6YYK1 113 aa11.27□□□□□ -0.61
TM9SF1-202ENST00000396854 C20orf202A1L168 122 aa11.27□□□□□ -0.61
TM9SF1-202ENST00000396854 GAGE1Q13065 139 aa11.27□□□□□ -0.61
TM9SF1-202ENST00000396854 LCN12Q6JVE5 192 aa11.27□□□□□ -0.61
TM9SF1-202ENST00000396854 C12orf54Q6X4T0 127 aa11.27□□□□□ -0.61
TM9SF1-202ENST00000396854 GOLT1AQ6ZVE7 132 aa11.27□□□□□ -0.61
TM9SF1-202ENST00000396854 BPIFA4PQ86YQ2 179 aa11.27□□□□□ -0.61
TM9SF1-202ENST00000396854 TMEM75Q8N9X5 138 aa11.27□□□□□ -0.61
TM9SF1-202ENST00000396854 CHCHD1Q96BP2 118 aaKnown RBP11.27□□□□□ -0.61
TM9SF1-202ENST00000396854 IGHV3OR16-8A0A075B7F1 116 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 K7EMT4 169 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 S100A7P31151 101 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 FOXA3P55318 350 aaPredicted RBP11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 COL5A1-AS1Q5SY13 56 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 PRNTQ86SH4 94 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 LYPD1Q8N2G4 141 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 NDFIP1Q9BT67 221 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 TRAV9-2A0A087WT02 112 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 DLEU1O43261 78 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 APOHP02749 345 aaPredicted RBP11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 Q6ZN92 141 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 OR4F17Q8NGA8 305 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 METTL26Q96S19 204 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 DAZ1Q9NQZ3 744 aaKnown RBP11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 UFC1Q9Y3C8 167 aa11.26□□□□□ -0.61
TM9SF1-202ENST00000396854 LOC102724200A0A096LPH7 203 aaPredicted RBP11.25□□□□□ -0.61
TM9SF1-202ENST00000396854 MRPS12O15235 138 aaKnown RBP11.25□□□□□ -0.61
TM9SF1-202ENST00000396854 BATFQ16520 125 aa11.25□□□□□ -0.61
TM9SF1-202ENST00000396854 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
TM9SF1-202ENST00000396854 SIGLEC15Q6ZMC9 328 aa11.25□□□□□ -0.61
TM9SF1-202ENST00000396854 ATOH7Q8N100 152 aa11.25□□□□□ -0.61
TM9SF1-202ENST00000396854 C3orf56Q8N813 242 aa11.25□□□□□ -0.61
TM9SF1-202ENST00000396854 ZFP30Q9Y2G7 519 aa11.25□□□□□ -0.61
TM9SF1-202ENST00000396854 U3KQE9 123 aa11.25□□□□□ -0.61
TM9SF1-202ENST00000396854 CHEK1O14757 476 aa11.24□□□□□ -0.61
TM9SF1-202ENST00000396854 DLX4Q92988 240 aaPredicted RBP11.24□□□□□ -0.61
TM9SF1-202ENST00000396854 TMEM213A2RRL7 107 aa11.24□□□□□ -0.61
TM9SF1-202ENST00000396854 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
TM9SF1-202ENST00000396854 CRXO43186 299 aaPredicted RBP11.24□□□□□ -0.61
TM9SF1-202ENST00000396854 MAJINQ3KP22 176 aa11.24□□□□□ -0.61
TM9SF1-202ENST00000396854 SHISA2Q6UWI4 295 aa11.24□□□□□ -0.61
TM9SF1-202ENST00000396854 GATD1Q8NB37 220 aa11.24□□□□□ -0.61
TM9SF1-202ENST00000396854 ZC2HC1AQ96GY0 325 aa11.24□□□□□ -0.61
TM9SF1-202ENST00000396854 TMEM70Q9BUB7 260 aa11.24□□□□□ -0.61
TM9SF1-202ENST00000396854 IGHV1-24A0A0C4DH33 117 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 K7EQM0 130 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 ZNF207O43670 478 aaKnown RBP11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 RIPPLY3P57055 190 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 TM4SF20Q53R12 229 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 PRR31Q5SQ13 230 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 CLEC5AQ9NY25 188 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 LAMTOR2Q9Y2Q5 125 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 MRPS16Q9Y3D3 137 aaKnown RBP11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 BUB3O43684 328 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 PSG3Q16557 428 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms