RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 BTN1A1Q13410 526 aa11.88□□□□□ -0.51
AP1S3-202ENST00000396653 PRR9Q5T870 116 aa11.88□□□□□ -0.51
AP1S3-202ENST00000396653 Q6AWC8 147 aa11.88□□□□□ -0.51
AP1S3-202ENST00000396653 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
AP1S3-202ENST00000396653 Q8NAQ8 132 aa11.88□□□□□ -0.51
AP1S3-202ENST00000396653 TVP23CQ96ET8 276 aa11.88□□□□□ -0.51
AP1S3-202ENST00000396653 SGK494Q96LW2 274 aa11.88□□□□□ -0.51
AP1S3-202ENST00000396653 IGHV3OR16-12A0A075B7B8 117 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 TRAV12-3A0A0B4J271 114 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 TRAV34A0A0B4J273 112 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 TAS2R60P59551 318 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 ZNF506Q5JVG8 444 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 LINC00479Q96M42 142 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 FAM210AQ96ND0 272 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 PYGO2Q9BRQ0 406 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 LINC00467Q9BRT7 94 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 ZFP30Q9Y2G7 519 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 COL7A1Q02388 2944 aa11.87□□□□□ -0.51
AP1S3-202ENST00000396653 RBFOX3A6NFN3 312 aa11.86□□□□□ -0.51
AP1S3-202ENST00000396653 ZNF324O75467 553 aaPredicted RBP11.86□□□□□ -0.51
AP1S3-202ENST00000396653 RNASE4P34096 147 aaKnown RBP11.86□□□□□ -0.51
AP1S3-202ENST00000396653 RRN3P1Q2M238 152 aa11.86□□□□□ -0.51
AP1S3-202ENST00000396653 COX8CQ7Z4L0 72 aa11.86□□□□□ -0.51
AP1S3-202ENST00000396653 LINC01587Q99440 93 aa11.86□□□□□ -0.51
AP1S3-202ENST00000396653 EDA2RQ9HAV5 297 aa11.86□□□□□ -0.51
AP1S3-202ENST00000396653 IGHV4-28A0A0C4DH34 117 aa11.85□□□□□ -0.51
AP1S3-202ENST00000396653 TMEM189A5PLL7 270 aa11.85□□□□□ -0.51
AP1S3-202ENST00000396653 LTAP01374 205 aa11.85□□□□□ -0.51
AP1S3-202ENST00000396653 IFITM2Q01629 132 aa11.85□□□□□ -0.51
AP1S3-202ENST00000396653 SMUG1Q53HV7 270 aa11.85□□□□□ -0.51
AP1S3-202ENST00000396653 NBEAL2Q6ZNJ1 2754 aa11.84□□□□□ -0.51
AP1S3-202ENST00000396653 TRAV21A0A0B4J279 112 aa11.84□□□□□ -0.51
AP1S3-202ENST00000396653 RAB14P61106 215 aa11.84□□□□□ -0.51
AP1S3-202ENST00000396653 TOR2AQ5JU69 321 aa11.84□□□□□ -0.51
AP1S3-202ENST00000396653 PCNPQ8WW12 178 aaKnown RBP11.84□□□□□ -0.51
AP1S3-202ENST00000396653 C8orf49Q96NF6 230 aa11.84□□□□□ -0.51
AP1S3-202ENST00000396653 A0A0J9YWU9 116 aa11.83□□□□□ -0.52
AP1S3-202ENST00000396653 TMEM250H0YL14 139 aa11.83□□□□□ -0.52
AP1S3-202ENST00000396653 RPL35P42766 123 aaKnown RBP11.83□□□□□ -0.52
AP1S3-202ENST00000396653 ZNF493Q6ZR52 646 aa11.83□□□□□ -0.52
AP1S3-202ENST00000396653 TMEM183AQ8IXX5 376 aa11.83□□□□□ -0.52
AP1S3-202ENST00000396653 ZNF705GA8MUZ8 300 aaPredicted RBP11.82□□□□□ -0.52
AP1S3-202ENST00000396653 GCGP01275 180 aa11.82□□□□□ -0.52
AP1S3-202ENST00000396653 ANXA2RQ3ZCQ2 193 aa11.82□□□□□ -0.52
AP1S3-202ENST00000396653 CLLU1Q5K131 121 aa11.82□□□□□ -0.52
AP1S3-202ENST00000396653 EIF4E3Q8N5X7 224 aaKnown RBP11.82□□□□□ -0.52
AP1S3-202ENST00000396653 TMEM263Q8WUH6 116 aaKnown RBP11.82□□□□□ -0.52
AP1S3-202ENST00000396653 SMIM12Q96EX1 92 aa11.82□□□□□ -0.52
AP1S3-202ENST00000396653 C16orf74Q96GX8 76 aa11.82□□□□□ -0.52
AP1S3-202ENST00000396653 EIF5A2Q9GZV4 153 aaKnown RBP11.82□□□□□ -0.52
AP1S3-202ENST00000396653 MED9Q9NWA0 146 aa11.82□□□□□ -0.52
AP1S3-202ENST00000396653 IGHV1OR15-1A0A075B7D0 117 aa11.81□□□□□ -0.52
AP1S3-202ENST00000396653 RGS13O14921 159 aa11.81□□□□□ -0.52
AP1S3-202ENST00000396653 PFN1P07737 140 aaKnown RBP11.81□□□□□ -0.52
AP1S3-202ENST00000396653 RNASE8Q8TDE3 154 aaKnown RBP11.81□□□□□ -0.52
AP1S3-202ENST00000396653 WWC2-AS2Q96NR7 200 aa11.81□□□□□ -0.52
AP1S3-202ENST00000396653 DERL1Q9BUN8 251 aa11.81□□□□□ -0.52
AP1S3-202ENST00000396653 STAB2Q8WWQ8 2551 aa11.81□□□□□ -0.52
AP1S3-202ENST00000396653 TGP01266 2768 aa11.8□□□□□ -0.52
AP1S3-202ENST00000396653 TEX48A0A1B0GUV7 120 aa11.8□□□□□ -0.52
AP1S3-202ENST00000396653 ZNF80P51504 273 aaPredicted RBP11.8□□□□□ -0.52
AP1S3-202ENST00000396653 TDRG1Q3Y452 100 aa11.8□□□□□ -0.52
AP1S3-202ENST00000396653 BAGE2Q86Y30 109 aa11.8□□□□□ -0.52
AP1S3-202ENST00000396653 ZC2HC1AQ96GY0 325 aa11.8□□□□□ -0.52
AP1S3-202ENST00000396653 MLST8Q9BVC4 326 aa11.8□□□□□ -0.52
AP1S3-202ENST00000396653 SMDT1Q9H4I9 107 aa11.8□□□□□ -0.52
AP1S3-202ENST00000396653 AZU1P20160 251 aa11.79□□□□□ -0.52
AP1S3-202ENST00000396653 CENPWQ5EE01 88 aa11.79□□□□□ -0.52
AP1S3-202ENST00000396653 IBA57Q5T440 356 aaKnown RBP11.79□□□□□ -0.52
AP1S3-202ENST00000396653 FAM159AQ6UWV7 190 aa11.79□□□□□ -0.52
AP1S3-202ENST00000396653 Q6ZQT7 251 aa11.79□□□□□ -0.52
AP1S3-202ENST00000396653 KCNS1Q96KK3 526 aa11.79□□□□□ -0.52
AP1S3-202ENST00000396653 PLAC8L1A1L4L8 177 aa11.78□□□□□ -0.52
AP1S3-202ENST00000396653 CBY3A6NI87 242 aa11.78□□□□□ -0.52
AP1S3-202ENST00000396653 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
AP1S3-202ENST00000396653 C9JCJ5 164 aa11.78□□□□□ -0.52
AP1S3-202ENST00000396653 DEFB4AO15263 64 aa11.78□□□□□ -0.52
AP1S3-202ENST00000396653 HTN1P15515 57 aa11.78□□□□□ -0.52
AP1S3-202ENST00000396653 ZNF674Q2M3X9 581 aa11.78□□□□□ -0.52
AP1S3-202ENST00000396653 PARLQ9H300 379 aa11.78□□□□□ -0.52
AP1S3-202ENST00000396653 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.53
AP1S3-202ENST00000396653 PRM2P04554 102 aa11.77□□□□□ -0.53
AP1S3-202ENST00000396653 SRP19P09132 144 aaKnown RBP11.77□□□□□ -0.53
AP1S3-202ENST00000396653 GNG4P50150 75 aa11.77□□□□□ -0.53
AP1S3-202ENST00000396653 PEA15Q15121 130 aa11.77□□□□□ -0.53
AP1S3-202ENST00000396653 MUC21Q5SSG8 566 aa11.77□□□□□ -0.53
AP1S3-202ENST00000396653 FAM162BQ5T6X4 162 aa11.77□□□□□ -0.53
AP1S3-202ENST00000396653 IL17DQ8TAD2 202 aa11.77□□□□□ -0.53
AP1S3-202ENST00000396653 LYRM9A8MSI8 78 aa11.76□□□□□ -0.53
AP1S3-202ENST00000396653 CRIP1P50238 77 aa11.76□□□□□ -0.53
AP1S3-202ENST00000396653 NHLRC2Q8NBF2 726 aa11.76□□□□□ -0.53
AP1S3-202ENST00000396653 C11orf72Q8NBR9 251 aa11.76□□□□□ -0.53
AP1S3-202ENST00000396653 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
AP1S3-202ENST00000396653 DKK2Q9UBU2 259 aa11.76□□□□□ -0.53
AP1S3-202ENST00000396653 NAGKQ9UJ70 344 aa11.76□□□□□ -0.53
AP1S3-202ENST00000396653 TIMM8BQ9Y5J9 83 aaPredicted RBP11.76□□□□□ -0.53
AP1S3-202ENST00000396653 TRBV20OR9-2A0A075B6H5 130 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 RAB19A4D1S5 217 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 CXorf65A6NEN9 183 aa11.75□□□□□ -0.53
AP1S3-202ENST00000396653 SNURFLB1AK76 121 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms