RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MINOS1-NBL1R4GNA1 71 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 HGFACQ04756 655 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 MRPL51Q4U2R6 128 aaKnown RBP8.37□□□□□ -1.07
COL4A4-201ENST00000396625 NMSQ5H8A3 153 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 J3QQQ9 107 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 IGKV1-5P01602 117 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 TMEM14EPQ6UXP3 125 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 RNF166Q96A37 237 aaPredicted RBP8.37□□□□□ -1.07
COL4A4-201ENST00000396625 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 CYTL1Q9NRR1 136 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 NTF4P34130 210 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 IGFBPL1Q8WX77 278 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 SDHAF1A6NFY7 115 aa8.37□□□□□ -1.07
COL4A4-201ENST00000396625 MRPL23Q16540 153 aaKnown RBP8.37□□□□□ -1.07
COL4A4-201ENST00000396625 PROP1O75360 226 aa8.36□□□□□ -1.07
COL4A4-201ENST00000396625 SPANXB1Q9NS25 103 aaPredicted RBP8.36□□□□□ -1.07
COL4A4-201ENST00000396625 DSCR9P59020 149 aa8.36□□□□□ -1.07
COL4A4-201ENST00000396625 AMTNQ6UX39 209 aa8.36□□□□□ -1.07
COL4A4-201ENST00000396625 MRPL14Q6P1L8 145 aaKnown RBP8.36□□□□□ -1.07
COL4A4-201ENST00000396625 LINC00479Q96M42 142 aa8.36□□□□□ -1.07
COL4A4-201ENST00000396625 RHPN1-AS1Q9BWJ2 59 aa8.36□□□□□ -1.07
COL4A4-201ENST00000396625 HS3ST6Q96QI5 342 aa8.36□□□□□ -1.07
COL4A4-201ENST00000396625 PSMB8P28062 276 aa8.36□□□□□ -1.07
COL4A4-201ENST00000396625 SPINK13Q1W4C9 94 aa8.36□□□□□ -1.07
COL4A4-201ENST00000396625 BUB1B-PAK6H3BSN5 160 aa8.36□□□□□ -1.07
COL4A4-201ENST00000396625 IGHV1-46P01743 117 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 F8VRH5 84 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 H3BUX3 64 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 ATP5G1P05496 136 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 RPL18AQ02543 176 aaKnown RBP8.35□□□□□ -1.07
COL4A4-201ENST00000396625 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
COL4A4-201ENST00000396625 DKK4Q9UBT3 224 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 IGHV1-18A0A0C4DH31 117 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 TEX48A0A1B0GUV7 120 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 LINC00114Q6XXX2 140 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 ZNF493Q6ZR52 646 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 ANGP03950 147 aaKnown RBP8.35□□□□□ -1.07
COL4A4-201ENST00000396625 ZNF492Q9P255 531 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 MRPS18CQ9Y3D5 142 aaKnown RBP8.35□□□□□ -1.07
COL4A4-201ENST00000396625 SMIM27A0A1W2PRY6 76 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 SIGLEC9Q9Y336 463 aa8.35□□□□□ -1.07
COL4A4-201ENST00000396625 CFPP27918 469 aa8.34□□□□□ -1.07
COL4A4-201ENST00000396625 SIGLEC8Q9NYZ4 499 aa8.34□□□□□ -1.07
COL4A4-201ENST00000396625 XCL2Q9UBD3 114 aa8.34□□□□□ -1.07
COL4A4-201ENST00000396625 IGHV3-38A0A0C4DH36 116 aa8.34□□□□□ -1.07
COL4A4-201ENST00000396625 NDUFB1O75438 58 aa8.34□□□□□ -1.07
COL4A4-201ENST00000396625 MRPL35Q9NZE8 188 aaKnown RBP8.34□□□□□ -1.07
COL4A4-201ENST00000396625 IGKV3D-7A0A0C4DH55 119 aa8.34□□□□□ -1.07
COL4A4-201ENST00000396625 SIVA1O15304 175 aa8.34□□□□□ -1.07
COL4A4-201ENST00000396625 PAQR4Q8N4S7 273 aaPredicted RBP8.34□□□□□ -1.07
COL4A4-201ENST00000396625 RNF5Q99942 180 aa8.34□□□□□ -1.07
COL4A4-201ENST00000396625 XCL1P47992 114 aa8.34□□□□□ -1.07
COL4A4-201ENST00000396625 SRSF2Q01130 221 aaKnown RBP8.34□□□□□ -1.08
COL4A4-201ENST00000396625 NTN3O00634 580 aaPredicted RBP8.33□□□□□ -1.08
COL4A4-201ENST00000396625 C15orf62A8K5M9 175 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 OOSP1A8MZH6 123 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 C12orf74Q32Q52 190 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 BRD3OSQ6XYD6 125 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 GFI1Q99684 422 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 PKIGQ9Y2B9 76 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 U3KQE9 123 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 CCL25O15444 150 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 PAX9P55771 341 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 VSIG2Q96IQ7 327 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 LINC00473A8K010 186 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 J3QRE1 110 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 TGFBR3LH3BV60 316 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 ZNF134P52741 427 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 LGALS9BQ3B8N2 356 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 LGALS9CQ6DKI2 356 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 NTN5Q8WTR8 489 aaPredicted RBP8.33□□□□□ -1.08
COL4A4-201ENST00000396625 WDR87Q6ZQQ6 2873 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 CYYR1Q96J86 154 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 APOC4P55056 127 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 TMEM178BH3BS89 294 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 COX7B2Q8TF08 81 aa8.33□□□□□ -1.08
COL4A4-201ENST00000396625 SRRM5B3KS81 715 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 SPRR3Q9UBC9 169 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 IGKV1-27A0A075B6S5 117 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.32□□□□□ -1.08
COL4A4-201ENST00000396625 ADCYAP1P18509 176 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 LYL1P12980 280 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 IGLL1P15814 213 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 H3BQ85 93 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 NPYP01303 97 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 IGKV1-39P01597 117 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 IGKV1D-39P04432 117 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 SLC25A29Q8N8R3 303 aa8.32□□□□□ -1.08
COL4A4-201ENST00000396625 LRP4O75096 1905 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 TAX1BP3O14907 124 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 ICOSQ9Y6W8 199 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 DEFB131AP59861 70 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 BDP1A6H8Y1 2624 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 ETDCA0A1B0GVM5 59 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 OVOL3O00110 214 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 GATA4P43694 442 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 LHFPL1Q86WI0 220 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 ACACBO00763 2458 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 FOXF2Q12947 444 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms