RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 G3V318 75 aa12.06□□□□□ -0.48
HOXA3-202ENST00000396352 H3BUT2 72 aa12.06□□□□□ -0.48
HOXA3-202ENST00000396352 GOSR1O95249 250 aa12.06□□□□□ -0.48
HOXA3-202ENST00000396352 NAA38Q9BRA0 125 aaKnown RBP12.06□□□□□ -0.48
HOXA3-202ENST00000396352 COL25A1Q9BXS0 654 aaPredicted RBP12.06□□□□□ -0.48
HOXA3-202ENST00000396352 SPTA1P02549 2419 aa12.06□□□□□ -0.48
HOXA3-202ENST00000396352 IGHV7-4-1A0A0J9YVY3 117 aa12.06□□□□□ -0.48
HOXA3-202ENST00000396352 UBE2E1P51965 193 aa12.06□□□□□ -0.48
HOXA3-202ENST00000396352 Q8N8P6 123 aa12.06□□□□□ -0.48
HOXA3-202ENST00000396352 TMEM158Q8WZ71 300 aa12.06□□□□□ -0.48
HOXA3-202ENST00000396352 PTPRZ1P23471 2315 aaPredicted RBP12.06□□□□□ -0.48
HOXA3-202ENST00000396352 A0A0G2JLM5 398 aa12.05□□□□□ -0.48
HOXA3-202ENST00000396352 SAA4P35542 130 aa12.05□□□□□ -0.48
HOXA3-202ENST00000396352 Q6ZQT7 251 aa12.05□□□□□ -0.48
HOXA3-202ENST00000396352 K7EP34 96 aa12.05□□□□□ -0.48
HOXA3-202ENST00000396352 OR2K2Q8NGT1 345 aa12.05□□□□□ -0.48
HOXA3-202ENST00000396352 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
HOXA3-202ENST00000396352 C8orf86Q6ZUL3 223 aa12.04□□□□□ -0.48
HOXA3-202ENST00000396352 GTF2H5Q6ZYL4 71 aa12.04□□□□□ -0.48
HOXA3-202ENST00000396352 NRACQ8N912 160 aa12.04□□□□□ -0.48
HOXA3-202ENST00000396352 AP1S3Q96PC3 154 aa12.04□□□□□ -0.48
HOXA3-202ENST00000396352 TTTY13Q9BZ97 58 aa12.04□□□□□ -0.48
HOXA3-202ENST00000396352 ZNF207O43670 478 aaKnown RBP12.03□□□□□ -0.48
HOXA3-202ENST00000396352 IGKCP01834 107 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 PRSS1P07477 247 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 RAB37Q96AX2 223 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 MRPL53Q96EL3 112 aaKnown RBP12.03□□□□□ -0.48
HOXA3-202ENST00000396352 PRSS47A8MTI9 375 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 TMEM78Q5T7P6 136 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 FOXC2Q99958 501 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 U3KQE9 123 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 TRAV26-2A0A0B4J265 109 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 PSMG4Q5JS54 123 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 C9orf47Q6ZRZ4 202 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 EEF1AKMT3Q96AZ1 226 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 VPS25Q9BRG1 176 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 HIGD1BQ9P298 99 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 SELENOKQ9Y6D0 94 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 NBASA2RRP1 2371 aa12.03□□□□□ -0.48
HOXA3-202ENST00000396352 MED13LQ71F56 2210 aa12.02□□□□□ -0.48
HOXA3-202ENST00000396352 TM4SF20Q53R12 229 aa12.02□□□□□ -0.48
HOXA3-202ENST00000396352 METTL26Q96S19 204 aa12.02□□□□□ -0.48
HOXA3-202ENST00000396352 TRBV7-1A0A0A6YYK4 115 aa12.02□□□□□ -0.49
HOXA3-202ENST00000396352 CENPVL3A0A0U1RRI6 287 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 A0A1W2PPM0 123 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 SMIM17P0DL12 118 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 CACNA1BQ00975 2339 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 IGHV4-4A0A075B6R2 117 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 SAP30O75446 220 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 ATP5LO75964 103 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 KLRB1Q12918 225 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 HIF1ANQ9NWT6 349 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 SMPXQ9UHP9 88 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 TMEM8BA6NDV4 472 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 K7ERU9 68 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 DPM2O94777 84 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 FXYD2P54710 66 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 GTSCR1Q86UQ5 136 aa12.01□□□□□ -0.49
HOXA3-202ENST00000396352 PRR9Q5T870 116 aa12□□□□□ -0.49
HOXA3-202ENST00000396352 C5orf56Q8N8D9 126 aa12□□□□□ -0.49
HOXA3-202ENST00000396352 CHAC1Q9BUX1 264 aa12□□□□□ -0.49
HOXA3-202ENST00000396352 ATRXP46100 2492 aa12□□□□□ -0.49
HOXA3-202ENST00000396352 LAGE3Q14657 143 aa11.99□□□□□ -0.49
HOXA3-202ENST00000396352 ZC2HC1BQ5TFG8 222 aa11.99□□□□□ -0.49
HOXA3-202ENST00000396352 UFC1Q9Y3C8 167 aa11.99□□□□□ -0.49
HOXA3-202ENST00000396352 TRBV25-1A0A075B6N4 114 aa11.99□□□□□ -0.49
HOXA3-202ENST00000396352 GCSHP23434 173 aa11.99□□□□□ -0.49
HOXA3-202ENST00000396352 LMO4P61968 165 aa11.99□□□□□ -0.49
HOXA3-202ENST00000396352 MRPL35Q9NZE8 188 aaKnown RBP11.99□□□□□ -0.49
HOXA3-202ENST00000396352 IGF2RP11717 2491 aa11.99□□□□□ -0.49
HOXA3-202ENST00000396352 HLA-DRB4P13762 266 aa11.98□□□□□ -0.49
HOXA3-202ENST00000396352 SMIM15Q7Z3B0 74 aa11.98□□□□□ -0.49
HOXA3-202ENST00000396352 HLA-DRB4X5D2U9 266 aa11.98□□□□□ -0.49
HOXA3-202ENST00000396352 TRAV40A0A0B4J280 105 aa11.98□□□□□ -0.49
HOXA3-202ENST00000396352 NPFFO15130 113 aa11.98□□□□□ -0.49
HOXA3-202ENST00000396352 C19orf54Q5BKX5 351 aa11.98□□□□□ -0.49
HOXA3-202ENST00000396352 ITLN2Q8WWU7 325 aaPredicted RBP11.98□□□□□ -0.49
HOXA3-202ENST00000396352 C20orf173Q96LM9 149 aa11.98□□□□□ -0.49
HOXA3-202ENST00000396352 SPANXN1Q5VSR9 72 aa11.98□□□□□ -0.49
HOXA3-202ENST00000396352 SPCS1Q9Y6A9 102 aa11.98□□□□□ -0.49
HOXA3-202ENST00000396352 H3BVH4 76 aa11.97□□□□□ -0.49
HOXA3-202ENST00000396352 IGF1P05019 195 aa11.97□□□□□ -0.49
HOXA3-202ENST00000396352 SMIM13P0DJ93 91 aa11.97□□□□□ -0.49
HOXA3-202ENST00000396352 GLMPQ8WWB7 406 aa11.97□□□□□ -0.49
HOXA3-202ENST00000396352 MEGF9Q9H1U4 602 aa11.97□□□□□ -0.49
HOXA3-202ENST00000396352 TMEM160Q9NX00 188 aa11.97□□□□□ -0.49
HOXA3-202ENST00000396352 ATP5G2Q06055 141 aa11.97□□□□□ -0.49
HOXA3-202ENST00000396352 COTL1Q14019 142 aa11.97□□□□□ -0.49
HOXA3-202ENST00000396352 PHLDA1Q8WV24 401 aaPredicted RBP11.97□□□□□ -0.49
HOXA3-202ENST00000396352 RAXQ9Y2V3 346 aa11.97□□□□□ -0.49
HOXA3-202ENST00000396352 NEGR1Q7Z3B1 354 aa11.96□□□□□ -0.49
HOXA3-202ENST00000396352 TMEM219Q86XT9 240 aa11.96□□□□□ -0.49
HOXA3-202ENST00000396352 BPESC1Q9GZL8 116 aa11.96□□□□□ -0.49
HOXA3-202ENST00000396352 CELSR1Q9NYQ6 3014 aa11.96□□□□□ -0.49
HOXA3-202ENST00000396352 VPS13CQ709C8 3753 aa11.96□□□□□ -0.49
HOXA3-202ENST00000396352 EFNA4P52798 201 aa11.96□□□□□ -0.49
HOXA3-202ENST00000396352 OR5A1Q8NGJ0 315 aa11.96□□□□□ -0.49
HOXA3-202ENST00000396352 MYOZ3Q8TDC0 251 aa11.96□□□□□ -0.49
HOXA3-202ENST00000396352 C16orf92Q96LL3 132 aa11.96□□□□□ -0.49
HOXA3-202ENST00000396352 K7ERJ3 54 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms