RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 ERCC8Q13216 396 aa14.54□□□□□ -0.08
LMNB1-202ENST00000395354 TMEM136Q6ZRR5 245 aa14.54□□□□□ -0.08
LMNB1-202ENST00000395354 ZNF738Q8NE65 137 aa14.54□□□□□ -0.08
LMNB1-202ENST00000395354 Q8TAT8 98 aa14.54□□□□□ -0.08
LMNB1-202ENST00000395354 AGPAT4-IT1Q9H0P7 198 aa14.54□□□□□ -0.08
LMNB1-202ENST00000395354 MRPL18Q9H0U6 180 aaKnown RBP14.54□□□□□ -0.08
LMNB1-202ENST00000395354 XKRY2A2RUG3 117 aa14.53□□□□□ -0.08
LMNB1-202ENST00000395354 SNURFLB1AK76 121 aa14.53□□□□□ -0.08
LMNB1-202ENST00000395354 SH2D1AO60880 128 aa14.53□□□□□ -0.08
LMNB1-202ENST00000395354 PRB4P10163 310 aaPredicted RBP14.53□□□□□ -0.08
LMNB1-202ENST00000395354 ID1P41134 155 aa14.53□□□□□ -0.08
LMNB1-202ENST00000395354 COA6Q5JTJ3 125 aaKnown RBP14.53□□□□□ -0.08
LMNB1-202ENST00000395354 Q6AWC8 147 aa14.53□□□□□ -0.08
LMNB1-202ENST00000395354 MRPL54Q6P161 138 aaKnown RBP14.53□□□□□ -0.08
LMNB1-202ENST00000395354 GTSF1Q8WW33 167 aa14.53□□□□□ -0.08
LMNB1-202ENST00000395354 C20orf173Q96LM9 149 aa14.53□□□□□ -0.08
LMNB1-202ENST00000395354 LINC00477Q96M19 166 aa14.53□□□□□ -0.08
LMNB1-202ENST00000395354 ASCL2Q99929 193 aa14.53□□□□□ -0.08
LMNB1-202ENST00000395354 M0QZ24 198 aa14.52□□□□□ -0.08
LMNB1-202ENST00000395354 SPINK4O60575 86 aa14.52□□□□□ -0.08
LMNB1-202ENST00000395354 RPS20P60866 119 aaKnown RBP14.52□□□□□ -0.08
LMNB1-202ENST00000395354 FHL3Q13643 280 aa14.52□□□□□ -0.08
LMNB1-202ENST00000395354 A0A1B0GXF2 115 aa14.51□□□□□ -0.09
LMNB1-202ENST00000395354 C2orf70A6NJV1 201 aa14.51□□□□□ -0.09
LMNB1-202ENST00000395354 SLURP1P55000 103 aa14.51□□□□□ -0.09
LMNB1-202ENST00000395354 SPATA3Q8NHX4 192 aa14.51□□□□□ -0.09
LMNB1-202ENST00000395354 GPR61Q9BZJ8 451 aa14.51□□□□□ -0.09
LMNB1-202ENST00000395354 TMEM189A5PLL7 270 aa14.51□□□□□ -0.09
LMNB1-202ENST00000395354 FABP5P3A8MUU1 101 aa14.51□□□□□ -0.09
LMNB1-202ENST00000395354 PF4P02776 101 aa14.51□□□□□ -0.09
LMNB1-202ENST00000395354 OR10J6PQ8NGY7 276 aa14.51□□□□□ -0.09
LMNB1-202ENST00000395354 DCANP1Q8TF63 244 aa14.51□□□□□ -0.09
LMNB1-202ENST00000395354 FRMD6-AS1P0C7T7 363 aa14.5□□□□□ -0.09
LMNB1-202ENST00000395354 EDN2P20800 178 aa14.5□□□□□ -0.09
LMNB1-202ENST00000395354 PEMTQ9UBM1 199 aa14.5□□□□□ -0.09
LMNB1-202ENST00000395354 TRBV7-9A0A0J9YWB2 115 aa14.49□□□□□ -0.09
LMNB1-202ENST00000395354 HBBP68871 147 aa14.49□□□□□ -0.09
LMNB1-202ENST00000395354 DLX4Q92988 240 aaPredicted RBP14.49□□□□□ -0.09
LMNB1-202ENST00000395354 PGLYRP4Q96LB8 373 aa14.49□□□□□ -0.09
LMNB1-202ENST00000395354 ZNF80P51504 273 aaPredicted RBP14.48□□□□□ -0.09
LMNB1-202ENST00000395354 RAB4BP61018 213 aa14.48□□□□□ -0.09
LMNB1-202ENST00000395354 HIST1H1AQ02539 215 aaPredicted RBP14.48□□□□□ -0.09
LMNB1-202ENST00000395354 A0A1B0GW15 77 aa14.47□□□□□ -0.09
LMNB1-202ENST00000395354 S100A8P05109 93 aa14.47□□□□□ -0.09
LMNB1-202ENST00000395354 MS4A6AQ9H2W1 248 aa14.47□□□□□ -0.09
LMNB1-202ENST00000395354 APCSP02743 223 aa14.47□□□□□ -0.09
LMNB1-202ENST00000395354 GZMBP10144 247 aa14.47□□□□□ -0.09
LMNB1-202ENST00000395354 AKR1D1P51857 326 aa14.47□□□□□ -0.09
LMNB1-202ENST00000395354 HIST3H2BBQ8N257 126 aa14.47□□□□□ -0.09
LMNB1-202ENST00000395354 OR8A1Q8NGG7 326 aa14.47□□□□□ -0.09
LMNB1-202ENST00000395354 VWFP04275 2813 aa14.46□□□□□ -0.09
LMNB1-202ENST00000395354 IGKV3-7A0A075B6H7 116 aa14.46□□□□□ -0.09
LMNB1-202ENST00000395354 K7EQG2 157 aa14.46□□□□□ -0.09
LMNB1-202ENST00000395354 RIGQ13278 110 aa14.46□□□□□ -0.09
LMNB1-202ENST00000395354 LINC01559Q495D7 138 aa14.46□□□□□ -0.09
LMNB1-202ENST00000395354 LINC00482Q8N8I6 264 aa14.46□□□□□ -0.09
LMNB1-202ENST00000395354 OR9G4Q8NGQ1 327 aa14.46□□□□□ -0.09
LMNB1-202ENST00000395354 A0A1B0GUT8 65 aa14.45□□□□□ -0.1
LMNB1-202ENST00000395354 FAM19A4Q96LR4 140 aa14.45□□□□□ -0.1
LMNB1-202ENST00000395354 CRISP2P16562 243 aa14.44□□□□□ -0.1
LMNB1-202ENST00000395354 SNRPD3P62318 126 aaKnown RBP14.44□□□□□ -0.1
LMNB1-202ENST00000395354 PAFAH1B2P68402 229 aa14.44□□□□□ -0.1
LMNB1-202ENST00000395354 GDF5OSQ5U4N7 250 aa14.44□□□□□ -0.1
LMNB1-202ENST00000395354 BORCS7Q96B45 105 aa14.44□□□□□ -0.1
LMNB1-202ENST00000395354 NOTCH3Q9UM47 2321 aa14.44□□□□□ -0.1
LMNB1-202ENST00000395354 TRAV2A0A0B4J234 112 aa14.43□□□□□ -0.1
LMNB1-202ENST00000395354 CAMPP49913 170 aa14.43□□□□□ -0.1
LMNB1-202ENST00000395354 Q0VG73 95 aa14.43□□□□□ -0.1
LMNB1-202ENST00000395354 ADAMTSL5Q6ZMM2 481 aa14.43□□□□□ -0.1
LMNB1-202ENST00000395354 GATD1Q8NB37 220 aa14.43□□□□□ -0.1
LMNB1-202ENST00000395354 ORM1P02763 201 aa14.43□□□□□ -0.1
LMNB1-202ENST00000395354 GFI1BQ5VTD9 330 aa14.43□□□□□ -0.1
LMNB1-202ENST00000395354 APRG1Q8IVJ8 170 aa14.43□□□□□ -0.1
LMNB1-202ENST00000395354 IFITM10A6NMD0 228 aa14.42□□□□□ -0.1
LMNB1-202ENST00000395354 ZNF705DP0CH99 300 aaPredicted RBP14.42□□□□□ -0.1
LMNB1-202ENST00000395354 ZNF705BP0CI00 300 aaPredicted RBP14.42□□□□□ -0.1
LMNB1-202ENST00000395354 S100A2P29034 98 aa14.42□□□□□ -0.1
LMNB1-202ENST00000395354 WFDC3Q8IUB2 231 aa14.42□□□□□ -0.1
LMNB1-202ENST00000395354 WFDC9Q8NEX5 89 aa14.42□□□□□ -0.1
LMNB1-202ENST00000395354 CSN3P07498 182 aa14.41□□□□□ -0.1
LMNB1-202ENST00000395354 IGLC6P0CF74 106 aa14.41□□□□□ -0.1
LMNB1-202ENST00000395354 CTRLP40313 264 aa14.41□□□□□ -0.1
LMNB1-202ENST00000395354 SLAQ13239 276 aa14.41□□□□□ -0.1
LMNB1-202ENST00000395354 OR10J3Q5JRS4 329 aa14.41□□□□□ -0.1
LMNB1-202ENST00000395354 ZFAND2AQ8N6M9 145 aa14.41□□□□□ -0.1
LMNB1-202ENST00000395354 TRRAPQ9Y4A5 3859 aa14.41□□□□□ -0.1
LMNB1-202ENST00000395354 ARMS2P0C7Q2 107 aa14.4□□□□□ -0.1
LMNB1-202ENST00000395354 CD33P20138 364 aa14.4□□□□□ -0.1
LMNB1-202ENST00000395354 LYZL1Q6UWQ5 148 aa14.4□□□□□ -0.1
LMNB1-202ENST00000395354 ZNF575Q86XF7 245 aa14.4□□□□□ -0.1
LMNB1-202ENST00000395354 FER1L6-AS1Q8NA97 138 aa14.4□□□□□ -0.1
LMNB1-202ENST00000395354 ODF3Q96PU9 254 aa14.4□□□□□ -0.1
LMNB1-202ENST00000395354 SELENOKQ9Y6D0 94 aa14.4□□□□□ -0.1
LMNB1-202ENST00000395354 TMSB15BA0A087X1C1 80 aa14.39□□□□□ -0.11
LMNB1-202ENST00000395354 TRAV21A0A0B4J279 112 aa14.39□□□□□ -0.11
LMNB1-202ENST00000395354 F2Z2F3 143 aa14.39□□□□□ -0.11
LMNB1-202ENST00000395354 F6UB75 175 aa14.39□□□□□ -0.11
LMNB1-202ENST00000395354 ZNF688P0C7X2 276 aa14.39□□□□□ -0.11
LMNB1-202ENST00000395354 TFPI2P48307 235 aa14.39□□□□□ -0.11
LMNB1-202ENST00000395354 KIAA1644Q3SXP7 199 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms