RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 FANCD2OSQ96PS1 177 aa11.11□□□□□ -0.63
CLIP2-203ENST00000395060 C21orf62Q9NYP8 219 aa11.11□□□□□ -0.63
CLIP2-203ENST00000395060 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
CLIP2-203ENST00000395060 TNFRSF13BO14836 293 aaPredicted RBP11.11□□□□□ -0.63
CLIP2-203ENST00000395060 DPM2O94777 84 aa11.11□□□□□ -0.63
CLIP2-203ENST00000395060 CYSLTR1Q9Y271 337 aa11.11□□□□□ -0.63
CLIP2-203ENST00000395060 ZNF575Q86XF7 245 aa11.1□□□□□ -0.63
CLIP2-203ENST00000395060 CEND1Q8N111 149 aa11.1□□□□□ -0.63
CLIP2-203ENST00000395060 DPF1Q92782 380 aa11.1□□□□□ -0.63
CLIP2-203ENST00000395060 SIGMAR1Q99720 223 aa11.1□□□□□ -0.63
CLIP2-203ENST00000395060 ECSCRQ19T08 205 aa11.1□□□□□ -0.63
CLIP2-203ENST00000395060 LYPD1Q8N2G4 141 aa11.1□□□□□ -0.63
CLIP2-203ENST00000395060 SIVA1O15304 175 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 BMI1P35226 326 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 EMP1P54849 157 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 DEFB1P60022 68 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 C11orf21Q9P2W6 132 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 GAGE12HA6NDE8 117 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 VSTM5A8MXK1 200 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 IGLL5B9A064 214 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 IGHG4P01861 327 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 HIF1ANQ9NWT6 349 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 IGKV3-7A0A075B6H7 116 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 FABP5P3A8MUU1 101 aa11.09□□□□□ -0.63
CLIP2-203ENST00000395060 F8W735 103 aaPredicted RBP11.09□□□□□ -0.63
CLIP2-203ENST00000395060 RPL7P18124 248 aaKnown RBP11.09□□□□□ -0.63
CLIP2-203ENST00000395060 SHISA9B4DS77 424 aa11.08□□□□□ -0.64
CLIP2-203ENST00000395060 IGLC6P0CF74 106 aa11.08□□□□□ -0.64
CLIP2-203ENST00000395060 GRNP28799 593 aaKnown RBP11.08□□□□□ -0.64
CLIP2-203ENST00000395060 SCGB2A2Q13296 93 aa11.08□□□□□ -0.64
CLIP2-203ENST00000395060 MYOZ3Q8TDC0 251 aa11.08□□□□□ -0.64
CLIP2-203ENST00000395060 CLUHP3Q96NS8 147 aa11.08□□□□□ -0.64
CLIP2-203ENST00000395060 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
CLIP2-203ENST00000395060 C8orf31Q8N9H6 132 aa11.08□□□□□ -0.64
CLIP2-203ENST00000395060 TRBV6-1A0A0K0K1D8 114 aa11.07□□□□□ -0.64
CLIP2-203ENST00000395060 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.07□□□□□ -0.64
CLIP2-203ENST00000395060 A0A1B0GWB2 263 aa11.07□□□□□ -0.64
CLIP2-203ENST00000395060 C12orf74Q32Q52 190 aa11.07□□□□□ -0.64
CLIP2-203ENST00000395060 SPANXN1Q5VSR9 72 aa11.07□□□□□ -0.64
CLIP2-203ENST00000395060 PHLDA1Q8WV24 401 aaPredicted RBP11.07□□□□□ -0.64
CLIP2-203ENST00000395060 IGKV3D-20A0A0C4DH25 116 aa11.07□□□□□ -0.64
CLIP2-203ENST00000395060 H3BVH4 76 aa11.07□□□□□ -0.64
CLIP2-203ENST00000395060 M0R381 172 aa11.07□□□□□ -0.64
CLIP2-203ENST00000395060 NBL1P41271 181 aa11.07□□□□□ -0.64
CLIP2-203ENST00000395060 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
CLIP2-203ENST00000395060 CIDEAO60543 219 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 CTSGP08311 255 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 C5orf64Q2M2E5 130 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 ZNF418Q8TF45 676 aaPredicted RBP11.06□□□□□ -0.64
CLIP2-203ENST00000395060 DPM3Q9P2X0 92 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 KAAG1Q9UBP8 84 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 LOC107984156A0A0G2JMH3 177 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 FAM90A27PA6NNH2 459 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 IGF1P05019 195 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 C3orf36Q3SXR2 165 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 ARL17AQ8IVW1 177 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 NXT2Q9NPJ8 142 aaKnown RBP11.06□□□□□ -0.64
CLIP2-203ENST00000395060 LINC00527Q9UJ94 153 aa11.06□□□□□ -0.64
CLIP2-203ENST00000395060 CLEC3BP05452 202 aa11.05□□□□□ -0.64
CLIP2-203ENST00000395060 FOXI2Q6ZQN5 318 aa11.05□□□□□ -0.64
CLIP2-203ENST00000395060 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
CLIP2-203ENST00000395060 C20orf78Q9BR46 151 aa11.05□□□□□ -0.64
CLIP2-203ENST00000395060 PDE6HQ13956 83 aa11.05□□□□□ -0.64
CLIP2-203ENST00000395060 RAB1BQ9H0U4 201 aa11.05□□□□□ -0.64
CLIP2-203ENST00000395060 IGLV11-55A0A075B6I3 123 aa11.04□□□□□ -0.64
CLIP2-203ENST00000395060 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
CLIP2-203ENST00000395060 CCDC144NLQ6NUI1 221 aa11.04□□□□□ -0.64
CLIP2-203ENST00000395060 PTH2Q96A98 100 aa11.04□□□□□ -0.64
CLIP2-203ENST00000395060 VKORC1Q9BQB6 163 aa11.04□□□□□ -0.64
CLIP2-203ENST00000395060 HRNRQ86YZ3 2850 aaPredicted RBP11.04□□□□□ -0.64
CLIP2-203ENST00000395060 AGPAT4-IT1Q9H0P7 198 aa11.04□□□□□ -0.64
CLIP2-203ENST00000395060 APOMO95445 188 aa11.04□□□□□ -0.64
CLIP2-203ENST00000395060 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
CLIP2-203ENST00000395060 CD300EQ496F6 205 aaPredicted RBP11.04□□□□□ -0.64
CLIP2-203ENST00000395060 CLEC19AQ6UXS0 136 aa11.04□□□□□ -0.64
CLIP2-203ENST00000395060 LAGE3Q14657 143 aa11.03□□□□□ -0.64
CLIP2-203ENST00000395060 TNFRSF14Q92956 283 aa11.03□□□□□ -0.64
CLIP2-203ENST00000395060 E9PLD3 99 aa11.03□□□□□ -0.64
CLIP2-203ENST00000395060 ZNF672Q499Z4 452 aaPredicted RBP11.03□□□□□ -0.64
CLIP2-203ENST00000395060 SCGB1D4Q6XE38 83 aa11.03□□□□□ -0.64
CLIP2-203ENST00000395060 ZNF502Q8TBZ5 544 aa11.03□□□□□ -0.64
CLIP2-203ENST00000395060 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
CLIP2-203ENST00000395060 MGPP08493 103 aa11.02□□□□□ -0.64
CLIP2-203ENST00000395060 KLHL30-AS1Q8NEE0 82 aa11.02□□□□□ -0.64
CLIP2-203ENST00000395060 GLMPQ8WWB7 406 aa11.02□□□□□ -0.64
CLIP2-203ENST00000395060 LINC01548A6NM66 108 aa11.02□□□□□ -0.65
CLIP2-203ENST00000395060 G3V318 75 aa11.02□□□□□ -0.65
CLIP2-203ENST00000395060 HLA-DRB4P13762 266 aa11.02□□□□□ -0.65
CLIP2-203ENST00000395060 Q8N8P6 123 aa11.02□□□□□ -0.65
CLIP2-203ENST00000395060 RPL39LQ96EH5 51 aaKnown RBP11.02□□□□□ -0.65
CLIP2-203ENST00000395060 MRPL16Q9NX20 251 aaKnown RBP11.02□□□□□ -0.65
CLIP2-203ENST00000395060 HLA-DRB4X5D2U9 266 aa11.02□□□□□ -0.65
CLIP2-203ENST00000395060 CREBBPQ92793 2442 aa11.02□□□□□ -0.65
CLIP2-203ENST00000395060 LY6LH3BQJ8 138 aa11.02□□□□□ -0.65
CLIP2-203ENST00000395060 CD3EP07766 207 aa11.02□□□□□ -0.65
CLIP2-203ENST00000395060 ZMAT4Q9H898 229 aa11.02□□□□□ -0.65
CLIP2-203ENST00000395060 OR11H12B2RN74 326 aa11.01□□□□□ -0.65
CLIP2-203ENST00000395060 ATP5LO75964 103 aa11.01□□□□□ -0.65
CLIP2-203ENST00000395060 PSMB2P49721 201 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms