RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 NEU1Q99519 415 aa18.38■□□□□ 0.53
CTF1-202ENST00000395019 NAT8BQ9UHF3 227 aa18.38■□□□□ 0.53
CTF1-202ENST00000395019 FAM231BA6NCW3 169 aa18.37■□□□□ 0.53
CTF1-202ENST00000395019 TRGC2P03986 189 aa18.37■□□□□ 0.53
CTF1-202ENST00000395019 ZNF688P0C7X2 276 aa18.37■□□□□ 0.53
CTF1-202ENST00000395019 DEFB1P60022 68 aa18.37■□□□□ 0.53
CTF1-202ENST00000395019 RPL19P84098 196 aaKnown RBP18.37■□□□□ 0.53
CTF1-202ENST00000395019 F6UB75 175 aa18.36■□□□□ 0.53
CTF1-202ENST00000395019 HIST1H1AQ02539 215 aaPredicted RBP18.36■□□□□ 0.53
CTF1-202ENST00000395019 SHISA2Q6UWI4 295 aa18.36■□□□□ 0.53
CTF1-202ENST00000395019 RBPMS2Q6ZRY4 209 aaKnown RBP18.36■□□□□ 0.53
CTF1-202ENST00000395019 NUP35Q8NFH5 326 aa18.36■□□□□ 0.53
CTF1-202ENST00000395019 PSMG4Q5JS54 123 aa18.35■□□□□ 0.53
CTF1-202ENST00000395019 TMEM61Q8N0U2 210 aa18.35■□□□□ 0.53
CTF1-202ENST00000395019 ZFP82Q8N141 532 aa18.35■□□□□ 0.53
CTF1-202ENST00000395019 DNHD1Q96M86 4753 aa18.35■□□□□ 0.53
CTF1-202ENST00000395019 TRBV7-9A0A0J9YWB2 115 aa18.34■□□□□ 0.53
CTF1-202ENST00000395019 FABP5P3A8MUU1 101 aa18.34■□□□□ 0.53
CTF1-202ENST00000395019 HIGD1CA8MV81 97 aa18.34■□□□□ 0.53
CTF1-202ENST00000395019 PHOX2AO14813 284 aa18.34■□□□□ 0.53
CTF1-202ENST00000395019 GTSF1Q8WW33 167 aa18.34■□□□□ 0.53
CTF1-202ENST00000395019 FAM19A4Q96LR4 140 aa18.34■□□□□ 0.53
CTF1-202ENST00000395019 TRAV25A0A0B4J276 109 aa18.33■□□□□ 0.52
CTF1-202ENST00000395019 FOXA3P55318 350 aaPredicted RBP18.33■□□□□ 0.52
CTF1-202ENST00000395019 SPATA3Q8NHX4 192 aa18.33■□□□□ 0.52
CTF1-202ENST00000395019 TMEM189A5PLL7 270 aa18.32■□□□□ 0.52
CTF1-202ENST00000395019 ACTL10Q5JWF8 245 aa18.32■□□□□ 0.52
CTF1-202ENST00000395019 SPINK4O60575 86 aa18.31■□□□□ 0.52
CTF1-202ENST00000395019 CD300EQ496F6 205 aaPredicted RBP18.31■□□□□ 0.52
CTF1-202ENST00000395019 COX19Q49B96 90 aa18.31■□□□□ 0.52
CTF1-202ENST00000395019 ZFAND2AQ8N6M9 145 aa18.31■□□□□ 0.52
CTF1-202ENST00000395019 GZMBP10144 247 aa18.31■□□□□ 0.52
CTF1-202ENST00000395019 A0A0J9YX75 114 aa18.3■□□□□ 0.52
CTF1-202ENST00000395019 XKRY2A2RUG3 117 aa18.3■□□□□ 0.52
CTF1-202ENST00000395019 CRISP2P16562 243 aa18.3■□□□□ 0.52
CTF1-202ENST00000395019 RPS20P60866 119 aaKnown RBP18.3■□□□□ 0.52
CTF1-202ENST00000395019 MRPL54Q6P161 138 aaKnown RBP18.3■□□□□ 0.52
CTF1-202ENST00000395019 RASL11AQ6T310 242 aa18.3■□□□□ 0.52
CTF1-202ENST00000395019 APRG1Q8IVJ8 170 aa18.3■□□□□ 0.52
CTF1-202ENST00000395019 SPAG8Q99932 426 aaPredicted RBP18.3■□□□□ 0.52
CTF1-202ENST00000395019 SAV1Q9H4B6 383 aaPredicted RBP18.3■□□□□ 0.52
CTF1-202ENST00000395019 TRAPPC1Q9Y5R8 145 aa18.3■□□□□ 0.52
CTF1-202ENST00000395019 FRMD6-AS1P0C7T7 363 aa18.29■□□□□ 0.52
CTF1-202ENST00000395019 GDF5OSQ5U4N7 250 aa18.29■□□□□ 0.52
CTF1-202ENST00000395019 EBLN2Q6P2I7 272 aa18.29■□□□□ 0.52
CTF1-202ENST00000395019 ATP5L2Q7Z4Y8 100 aa18.29■□□□□ 0.52
CTF1-202ENST00000395019 FRZBQ92765 325 aa18.29■□□□□ 0.52
CTF1-202ENST00000395019 GNB1LQ9BYB4 327 aa18.29■□□□□ 0.52
CTF1-202ENST00000395019 PKD1L1Q8TDX9 2849 aa18.28■□□□□ 0.52
CTF1-202ENST00000395019 LINC01559Q495D7 138 aa18.28■□□□□ 0.52
CTF1-202ENST00000395019 WDR73Q6P4I2 378 aa18.28■□□□□ 0.52
CTF1-202ENST00000395019 FOXI2Q6ZQN5 318 aa18.28■□□□□ 0.52
CTF1-202ENST00000395019 PGLYRP4Q96LB8 373 aa18.28■□□□□ 0.52
CTF1-202ENST00000395019 FABP9Q0Z7S8 132 aa18.27■□□□□ 0.52
CTF1-202ENST00000395019 PRR9Q5T870 116 aa18.27■□□□□ 0.52
CTF1-202ENST00000395019 Q6AWC8 147 aa18.27■□□□□ 0.52
CTF1-202ENST00000395019 ODF3Q96PU9 254 aa18.27■□□□□ 0.52
CTF1-202ENST00000395019 OR4C46A6NHA9 309 aa18.27■□□□□ 0.51
CTF1-202ENST00000395019 DUSP14O95147 198 aaKnown RBP18.27■□□□□ 0.51
CTF1-202ENST00000395019 HIST1H2BKO60814 126 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 ORM1P02763 201 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 HIST1H2BJP06899 126 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 TRGC1P0CF51 173 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 CD33P20138 364 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 HIST1H2BOP23527 126 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 HIST1H2BBP33778 126 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 HIST1H2BDP58876 126 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 HIST1H2BCP62807 126 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 HIST2H2BEQ16778 126 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.26■□□□□ 0.51
CTF1-202ENST00000395019 HIST1H2BHQ93079 126 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 HIST1H2BNQ99877 126 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 HIST1H2BMQ99879 126 aa18.26■□□□□ 0.51
CTF1-202ENST00000395019 TMSB15BA0A087X1C1 80 aa18.25■□□□□ 0.51
CTF1-202ENST00000395019 LOC105371267A0A1B0GV96 52 aa18.25■□□□□ 0.51
CTF1-202ENST00000395019 A0A1B0GXF2 115 aa18.25■□□□□ 0.51
CTF1-202ENST00000395019 SNURFLB1AK76 121 aa18.25■□□□□ 0.51
CTF1-202ENST00000395019 MT-ND6P03923 174 aa18.25■□□□□ 0.51
CTF1-202ENST00000395019 TMEM136Q6ZRR5 245 aa18.25■□□□□ 0.51
CTF1-202ENST00000395019 ZNF575Q86XF7 245 aa18.25■□□□□ 0.51
CTF1-202ENST00000395019 ZNF256Q9Y2P7 627 aaPredicted RBP18.25■□□□□ 0.51
CTF1-202ENST00000395019 PF4P02776 101 aa18.24■□□□□ 0.51
CTF1-202ENST00000395019 DEFB131AP59861 70 aa18.24■□□□□ 0.51
CTF1-202ENST00000395019 LINC00482Q8N8I6 264 aa18.24■□□□□ 0.51
CTF1-202ENST00000395019 C11orf21Q9P2W6 132 aa18.24■□□□□ 0.51
CTF1-202ENST00000395019 TRAV21A0A0B4J279 112 aa18.23■□□□□ 0.51
CTF1-202ENST00000395019 GPX1P07203 203 aa18.23■□□□□ 0.51
CTF1-202ENST00000395019 IGKV3D-20A0A0C4DH25 116 aa18.23■□□□□ 0.51
CTF1-202ENST00000395019 KLLNB2CW77 178 aa18.23■□□□□ 0.51
CTF1-202ENST00000395019 SAP30O75446 220 aa18.23■□□□□ 0.51
CTF1-202ENST00000395019 MRPL18Q9H0U6 180 aaKnown RBP18.23■□□□□ 0.51
CTF1-202ENST00000395019 MAP6D1Q9H9H5 199 aa18.23■□□□□ 0.51
CTF1-202ENST00000395019 HLA-DQA1P01909 254 aa18.22■□□□□ 0.51
CTF1-202ENST00000395019 S100A6P06703 90 aa18.22■□□□□ 0.51
CTF1-202ENST00000395019 LEPP41159 167 aa18.22■□□□□ 0.51
CTF1-202ENST00000395019 HBBP68871 147 aa18.22■□□□□ 0.51
CTF1-202ENST00000395019 J3KRW8 73 aa18.21■□□□□ 0.51
CTF1-202ENST00000395019 IGLV1-51P01701 117 aa18.21■□□□□ 0.51
CTF1-202ENST00000395019 OR2K2Q8NGT1 345 aa18.21■□□□□ 0.51
CTF1-202ENST00000395019 A0A1B0GUT8 65 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms